Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
366 |
PWM (Da): |
38618.09 |
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PI (pH):
| 4.1 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MAFKTLASLLSVLVIIQVASGALTRRVACPDGVNTATNAACCQLFAVRDDIQQNLFDGGECGEEVHESLRLTFHDAIGISPSIASRGQFGGGGADGSIALFEDIETNFHANLGVDEIIDEQRPFIARHNLTTADFIQFAGAIGVSNCPGAPQLDVFIGRPDATQPAPDLTVPEPFDTVDSIIERFSDAGGFTPAEIVALLVSHTIAAADHVDPSIPGTPFDSTPEEFDTQFFIETQLRGTLFPGTGGNQGEVESPLRGELRLQSDSELARDSRTACEWQSFVNNQAKLQSAFKAAFRKMTVLGHDESLLIECSELVPTPPPATSVAHFPAGLSNADVEQACAETPFPTLPTDPGPVTTVAPVPPS* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (5 introns). Incorrect prediction from JGI: the last short exon is missing.
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTTTCAAAACTCTCGCCTCTCTCCTTTCGGTTCTGGTCATCATCCAGGTCGCAAGCGGTGAGCGATAGAGCGCGGTATTTCTGCTACGACGTCATCCTGATATCGTCTTACCTGCC TAGGCGCGCTCACCCGCCGTGTCGCCTGCCCCGACGGCGTGAACACCGCTACCAACGCGGCGTGCTGCCAGCTCTTCGCTGTCCGCGACGACATCCAGCAGAACCTGTTCGATGGCGGCG AGTGTGGCGAGGAGGTCCACGAGTCCCTCCGTCTGACCTTCCACGACGCCATCGGCATCTCTCCTTCCATCGCCTCTCGCGGCCAATTCGGGTAACTTCATATCTCCTCTGGGCCTCCAT ATCGTCAGGTATCTAACTTTGGTGCTCTGCAGAGGCGGAGGTGCCGACGGCTCCATCGCCCTCTTTGAGGACATCGAAACCAACTTCCACGCCAACCTCGGTGTCGACGAGATCATCGAC GAGCAACGGCCGTTCATCGCCCGCCACAACCTCACCACCGCCGACTTGTTCGTGTCTTCCCCTGACATCTAGCGTGCTGTCCGAAACTGACAACACCTCCCACTGCAGCATCCAGTTCGC CGGCGCGATCGGTGTCAGCAACTGCCCTGGCGCGCCCCAGCTGGACGTGTTCATCGGCCGCCCCGACGCGACGCAGCCCGCGCCCGACCTGACGGTGCCCGAGCCGTTCGACACCGTCGA CAGCATCATCGAGCGGTTCTCCGACGCGGGCGGCTTCACGCCCGCCGAGATCGTCGCGCTCCTCGTGTCGCACACGATCGCGGCGGCCGACCACGTCGACCCGAGCATCCCCGGAACGCC CTTCGACTCGACCCCGGAGGAGTTCGACACGCAGTTCTTCATCGAGACCCAGCTCCGTGGCACGCTCTTCCCCGGCACCGGCGGCAACCAGGGCGAGGTCGAGTCGCCCCTCCGCGGCGA GCTGCGCCTCCAGTCCGACTCTGAGCTCGCGCGCGACTCTCGCACTGCTTGCGAGTGGCAGTCCTTCGTCAGTGCGTATCTCTTTTTCTTACCCCTTGATGTATTGGGGGATACTGACGC GTGGGAACGCAGACAATCAGGCTAAGCTCCAGTCCGCGTTCAAGGCTGCCTTCCGCAAGATGACCGTGCTCGGCCACGACGAGAGCCTGCTGATCGAGTGCTCCGAGCTCGTGCCCACGC CCCCGCCCGCGACGAGCGTCGCGCACTTCCCCGCTGGCCTCAGCAACGCCGACGTCGAGCAGGCGTGCGCCGAGACCCCCTTCCCGACGCTCCCCACCGACCCCGGACCCGTCACCACAG TCGCCCCCGTGTAAGTGCCTGATCGCTCGAGTATGTCGCCCGGCGCTGACTTGTATCCTTGCAGCCCCCCGTCGTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTTTCAAAACTCTCGCCTCTCTCCTTTCGGTTCTGGTCATCATCCAGGTCGCAAGCGGCGCGCTCACCCGCCGTGTCGCCTGCCCCGACGGCGTGAACACCGCTACCAACGCGGCG TGCTGCCAGCTCTTCGCTGTCCGCGACGACATCCAGCAGAACCTGTTCGATGGCGGCGAGTGTGGCGAGGAGGTCCACGAGTCCCTCCGTCTGACCTTCCACGACGCCATCGGCATCTCT CCTTCCATCGCCTCTCGCGGCCAATTCGGAGGCGGAGGTGCCGACGGCTCCATCGCCCTCTTTGAGGACATCGAAACCAACTTCCACGCCAACCTCGGTGTCGACGAGATCATCGACGAG CAACGGCCGTTCATCGCCCGCCACAACCTCACCACCGCCGACTTCATCCAGTTCGCCGGCGCGATCGGTGTCAGCAACTGCCCTGGCGCGCCCCAGCTGGACGTGTTCATCGGCCGCCCC GACGCGACGCAGCCCGCGCCCGACCTGACGGTGCCCGAGCCGTTCGACACCGTCGACAGCATCATCGAGCGGTTCTCCGACGCGGGCGGCTTCACGCCCGCCGAGATCGTCGCGCTCCTC GTGTCGCACACGATCGCGGCGGCCGACCACGTCGACCCGAGCATCCCCGGAACGCCCTTCGACTCGACCCCGGAGGAGTTCGACACGCAGTTCTTCATCGAGACCCAGCTCCGTGGCACG CTCTTCCCCGGCACCGGCGGCAACCAGGGCGAGGTCGAGTCGCCCCTCCGCGGCGAGCTGCGCCTCCAGTCCGACTCTGAGCTCGCGCGCGACTCTCGCACTGCTTGCGAGTGGCAGTCC TTCGTCAACAATCAGGCTAAGCTCCAGTCCGCGTTCAAGGCTGCCTTCCGCAAGATGACCGTGCTCGGCCACGACGAGAGCCTGCTGATCGAGTGCTCCGAGCTCGTGCCCACGCCCCCG CCCGCGACGAGCGTCGCGCACTTCCCCGCTGGCCTCAGCAACGCCGACGTCGAGCAGGCGTGCGCCGAGACCCCCTTCCCGACGCTCCCCACCGACCCCGGACCCGTCACCACAGTCGCC CCCGTCCCCCCGTCGTAA |
Retrieve as FASTA
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