Entry information : MpopCIIAC
Entry ID 8544
Creation 2011-09-27 (Christophe Dunand)
Last sequence changes 2011-09-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-27 (Catherine Mathe (Scipio))
Peroxidase information: MpopCIIAC
Name MpopCIIAC
Class Asco Class II type C    [Orthogroup: CIIAC001]
Taxonomy Eukaryota Fungi Ascomycota Dothideomycetes Mycosphaerellaceae Mycosphaerella
Organism Mycosphaerella populorum (Septoria musiva)    [TaxId: 85929 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MpopCIIAC
start..stop
S start..stop
SpopCIIAC 523 0 12..350 1..334
CzmCIIAC01 361 2e-125 74..350 28..298
ZcelCIIAC03 358 1e-122 67..350 132..408
MpiCIIAC[P]02 301 9e-102 68..346 46..319
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 300362..301417 1056  
complement(join(300362..301417))


exon

Literature and cross-references MpopCIIAC
DNA ref. JGI genome:   scaffold_3 (301417..300362)
Protein sequence: MpopCIIAC
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   351 (327)
PWM (Da):   %s   37518.77 (34815.4)  
PI (pH):   %s   8.48 (7.58) Peptide Signal:   %s   cut: 25 range:25-351
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRSKLSLWLV RMSLCSHLAV SAFSETIINP GPNGQSKISS TIKTSTRAST NSFPPVVSST SSPISTTCPD FWTAVVSDLA SSMRTPNGQC NNIARASIRF AFHDAAAFSS KLPFYAPAAG  GADGSLLLSP TEILRKDNEG LHSYHSFLTS KFHSYQKTSN DALTAADLIQ IAGATGILAC PGGRIGRVFV GRKDTSQASP ENLLPQAFGP GSDHNSLLNL FSDKGFSPRD LAALIGAHST 
SIAKFQSQFG IPVGTPQDST PGVWDTKYYR EVYNNNPPPV SGVGRFESDV NLSRNLSKEG VGVHFRGFVD RQAEWGDAFA RAWERLSLLG VEERGRGEMG DCTEVVGRAF S 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron, 2 introns in th 5'UTR). ESTs found from JGI (confirm the 5' prediction).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGGTCCA AACTTTCTCT GTGGCTCGTA CGCATGAGCC TGTGCAGCCA TCTAGCTGTC AGTGCGTTCT CGGAAACCAT CATCAACCCA GGACCCAACG GCCAGTCCAA GATTTCTTCG  ACCATCAAGA CGAGTACCAG AGCTTCCACC AACTCCTTTC CTCCCGTCGT CTCATCGACA TCTTCACCAA TTTCGACAAC ATGTCCCGAC TTCTGGACGG CCGTAGTATC CGACCTAGCA  TCAAGCATGC GGACCCCTAA CGGACAATGC AACAACATCG CTCGAGCATC CATCCGCTTC GCCTTCCACG ACGCCGCCGC ATTCTCCTCC AAACTACCCT TCTACGCCCC TGCCGCAGGC  GGCGCAGACG GCTCACTCCT CCTCTCCCCG ACAGAAATCC TTCGCAAAGA CAACGAAGGA CTACACTCCT ACCACAGCTT CCTCACCTCC AAATTCCACT CCTACCAAAA AACCTCAAAC  GACGCCCTCA CCGCCGCAGA TCTCATCCAA ATCGCCGGAG CAACAGGTAT CCTCGCCTGT CCCGGCGGCC GCATCGGACG CGTTTTCGTC GGACGCAAAG ATACCTCTCA AGCCTCTCCA  GAAAATCTTC TCCCGCAAGC CTTCGGGCCC GGATCAGATC ATAATTCCCT ATTAAACCTC TTCTCAGATA AAGGATTCAG TCCTCGAGAT CTCGCAGCTC TCATCGGAGC ACACAGTACA  TCTATCGCAA AATTCCAATC CCAATTCGGA ATTCCTGTCG GCACGCCGCA AGATTCTACT CCGGGAGTGT GGGATACGAA ATACTATCGT GAAGTGTATA ATAATAATCC TCCTCCAGTT  TCGGGAGTGG GGAGATTTGA AAGTGATGTG AATTTGAGTA GGAATTTGTC GAAGGAGGGC GTTGGAGTGC ATTTTAGGGG GTTTGTGGAT CGGCAGGCGG AGTGGGGAGA TGCTTTTGCG 
AGGGCTTGGG AGAGGTTGAG TTTACTTGGT GTGGAGGAGA GGGGGAGAGG GGAGATGGGG GATTGTACGG AGGTGGTGGG TAGGGCGTTT TCATAG 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGGTCCA AACTTTCTCT GTGGCTCGTA CGCATGAGCC TGTGCAGCCA TCTAGCTGTC AGTGCGTTCT CGGAAACCAT CATCAACCCA GGACCCAACG GCCAGTCCAA GATTTCTTCG  ACCATCAAGA CGAGTACCAG AGCTTCCACC AACTCCTTTC CTCCCGTCGT CTCATCGACA TCTTCACCAA TTTCGACAAC ATGTCCCGAC TTCTGGACGG CCGTAGTATC CGACCTAGCA  TCAAGCATGC GGACCCCTAA CGGACAATGC AACAACATCG CTCGAGCATC CATCCGCTTC GCCTTCCACG ACGCCGCCGC ATTCTCCTCC AAACTACCCT TCTACGCCCC TGCCGCAGGC  GGCGCAGACG GCTCACTCCT CCTCTCCCCG ACAGAAATCC TTCGCAAAGA CAACGAAGGA CTACACTCCT ACCACAGCTT CCTCACCTCC AAATTCCACT CCTACCAAAA AACCTCAAAC  GACGCCCTCA CCGCCGCAGA TCTCATCCAA ATCGCCGGAG CAACAGGTAT CCTCGCCTGT CCCGGCGGCC GCATCGGACG CGTTTTCGTC GGACGCAAAG ATACCTCTCA AGCCTCTCCA  GAAAATCTTC TCCCGCAAGC CTTCGGGCCC GGATCAGATC ATAATTCCCT ATTAAACCTC TTCTCAGATA AAGGATTCAG TCCTCGAGAT CTCGCAGCTC TCATCGGAGC ACACAGTACA  TCTATCGCAA AATTCCAATC CCAATTCGGA ATTCCTGTCG GCACGCCGCA AGATTCTACT CCGGGAGTGT GGGATACGAA ATACTATCGT GAAGTGTATA ATAATAATCC TCCTCCAGTT  TCGGGAGTGG GGAGATTTGA AAGTGATGTG AATTTGAGTA GGAATTTGTC GAAGGAGGGC GTTGGAGTGC ATTTTAGGGG GTTTGTGGAT CGGCAGGCGG AGTGGGGAGA TGCTTTTGCG 
AGGGCTTGGG AGAGGTTGAG TTTACTTGGT GTGGAGGAGA GGGGGAGAGG GGAGATGGGG GATTGTACGG AGGTGGTGGG TAGGGCGTTT TCATAG 

Retrieve as FASTA  
cDNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GTTTTGATGG AAGAGGGTGG ATGCGGTTGT CTTTTTGAAA TCCATGGTAG TTTGAGGTGC GAGTGCTTAG GTGGACGACA GAAGCCCTGG TTACGGTACG TGGAGATATA CATCAGTGGA  AAATAGAGGC CTGGTTCGGC CTGATTGTAC TAGTATGGAG AGCCACCGGA CCATTGAGAG ATCAGGCGAT CGCGTGTCAT CTGGCCTTCG CTTCGCATGG ATACTTAGCA AGATGTATTT  CTCTGTTGCA TCGTAGAAGA CGAAGCAACG CCCGGAAAAT CATTTGGGAC AGGTATATGT CGACACTAGG CCTAGGCTCC TGATAGCGCA AACTCCGGTC AGTATGCAAC GTGCTACGAC  CGAACAGCAC GAGCCCTGAT GGCAGGTATA ATATCCACTT CAACGACAGA ACACGTTTCT ACTTTACCAC GACAGAGACA ACCCAACGTC TTGTCTGGTC TGACTGTTAT GCTGAGCCAC  TTTCGCGAGA GCTCTCTGTA GCTCCGTGCT TACTTCTCAC ATGGCACACC CTCACACCGT TCCACATGGG AGCGCCCGAC GCGCCACAAA TCACTCTTTG CTTATATCGA CCGGATCAGC  CAGGTGCTAC ATGTTCTCAA TCATGTGGCG TGGCGGCAGA ACCACCAGTC TCTATATATG GTAGCTGACG AGACGAAAGG AGGCAATTCA TACATCTGAA GCTTACGCAA TGGGGACATT  GCTTATGGTA AAAACTTGCT GCAAGATGCG GTGCCTTTCA AAGCGAGGTG ACTTGTGGAC TTTGCCGATG CGGTGGGAAT TGAAGGTGGT ATAAGAACAA TTGCGTGCGG CACCAAAATG  ACATTTTCAA GTCATACTTC CACAGATCAT TTTCTAGCCT GACAGGATGC GGTCCAAACT TTCTCTGTGG CTCGTACGCA TGAGCCTGTG CAGCCATCTA GCTGTCAGTG CGTTCTCGGA  AACCATCATC AACCCAGGAC CCAACGGCCA GTCCAAGATT TCTTCGACCA TCAAGACGAG TACCAGAGCT TCCACCAACT CCTTTCCTCC CGTCGTCTCA TCGACATCTT CACCAATTTC  GACAACATGT CCCGACTTCT GGACGGCCGT AGTATCCGAC CTAGCATCAA GCATGCGGAC CCCTAACGGA CAATGCAACA ACATCGCTCG AGCATCCATC CGCTTCGCCT TCCACGACGC  CGCCGCATTC TCCTCCAAAC TACCCTTCTA CGCCCCTGCC GCAGGCGGCG CAGACGGCTC ACTCCTCCTC TCCCCGACAG AAATCCTTCG CAAAGACAAC GAAGGACTAC ACTCCTACCA  CAGCTTCCTC ACCTCCAAAT TCCACTCCTA CCAAAAAACC TCAAACGACG CCCTCACCGC CGCAGATCTC ATCCAAATCG CCGGAGCAAC AGGTATCCTC GCCTGTCCCG GCGGCCGCAT  CGGACGCGTT TTCGTCGGAC GCAAAGATAC CTCTCAAGCC TCTCCAGAAA ATCTTCTCCC GCAAGCCTTC GGGCCCGGAT CAGATCATAA TTCCCTATTA AACCTCTTCT CAGATAAAGG  ATTCAGTCCT CGAGATCTCG CAGCTCTCAT CGGAGCACAC AGTACATCTA TCGCAAAATT CCAATCCCAA TTCGGAATTC CTGTCGGCAC GCCGCAAGAT TCTACTCCGG GAGTGTGGGA  TACGAAATAC TATCGTGAAG TGTATAATAA TAATCCTCCT CCAGTTTCGG GAGTGGGGAG ATTTGAAAGT GATGTGAATT TGAGTAGGAA TTTGTCGAAG GAGGGCGTTG GAGTGCATTT  TAGGGGGTTT GTGGATCGGC AGGCGGAGTG GGGAGATGCT TTTGCGAGGG CTTGGGAGAG GTTGAGTTTA CTTGGTGTGG AGGAGAGGGG GAGAGGGGAG ATGGGGGATT GTACGGAGGT 
GGTGGGTAGG GCGTTTTCAT AG 

Retrieve as FASTA