View Redoxidase 8545

Entry information : SpopCIIAC

Entry ID	8545
Creation	2011-09-27 (Christophe Dunand)
Last sequence changes	2011-09-27 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2013-09-04 (Catherine Mathe (Scipio))

Peroxidase information: SpopCIIAC

Name

SpopCIIAC

Class

Asco Class II type C [Orthogroup: CIIAC001]

Taxonomy

Eukaryota Fungi Ascomycota Dothideomycetes Mycosphaerellaceae Mycosphaerella

Organism

Septoria populicola (Mycosphaerella populicola) [TaxId: 215467 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SpopCIIAC start..stop	S start..stop
MpopCIIAC	524	0	1..334	12..350
CzmCIIAC01	361	9.97e-126	61..334	27..298
ZcelCIIAC03	346	3.08e-118	55..334	132..408
MpiCIIAC[P]02	308	1.96e-104	56..330	46..319

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	200029..201033	1003
complement(join(200029..201033))

Literature and cross-references SpopCIIAC

DNA ref.	JGI genome: scaffold_16 (201033..200029)

Protein sequence: SpopCIIAC

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	335
PWM (Da):	35062.22
PI (pH):	5.72

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MSLCSHLAVS AFSETIINPG PNGQSKISSA IKTSTSTFPP LVSSKSSASS PTSTTCPDFW TAVVSDLASN MRSNNGQCND ISRASIRFAF HDAATFSSKL PFYAPAAGGA DGSLLLSPTE IDREDNDGLH DYHAFLSSKL HSYQQTSGYA LSAADLVQIA GATGILACPG GRIGRVFVGR KDSSEASPPH LLPHAFGLGS DHNSLVALFA DKGFSPRDLA ALVGAHSTSI AKFQSRFGLP
VGTPQDSTPG VWDVGFYGQV LDPPPAIGRF ESDVHLSQNL SGDGAGVHFR GFVGRQREWG DAFASAWEML SLLGLPESER AEMGDCTEVV VGVFL

Retrieve as FASTA

Remarks

Complete sequence from genomic (no intron).

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGAGCCTGT GCAGCCATCT AGCCGTCAGT GCCTTTTCGG AAACCATCAT CAACCCAGGA CCCAACGGCC AGTCCAAAAT TTCGTCGGCC ATCAAGACGA GTACCAGCAC CTTTCCTCCT CTCGTCTCAT CGAAATCCTC AGCTTCTTCG CCGACTTCGA CAACATGTCC AGACTTCTGG ACGGCGGTAG TATCCGATCT AGCATCGAAC ATGCGTAGCA ACAACGGACA ATGCAACGAC ATCTCTCGAG CATCCATCCG CTTCGCCTTC CACGACGCCG CCACCTTCTC CTCCAAACTC CCCTTTTACG CACCCGCCGC AGGCGGCGCA GACGGCTCCC TCCTCCTCTC GCCCACGGAA ATCGACCGCG AAGACAACGA CGGACTACAC GACTACCACG CCTTTCTCAG CTCCAAATTG CACTCCTACC AACAAACCTC CGGCTACGCC CTCAGCGCCG CAGATCTCGT CCAAATCGCC GGAGCAACAG GAATTCTCGC CTGTCCCGGC GGCCGCATCG GCCGCGTGTT CGTCGGACGC AAAGATAGCT CCGAAGCTTC TCCTCCCCAT CTTCTCCCGC ACGCCTTCGG GCTCGGATCC GATCATAATT CTCTCGTAGC CCTCTTCGCC GACAAAGGCT TCTCTCCTCG AGACCTCGCT GCTCTCGTCG GTGCGCATAG TACCTCGATT GCGAAATTCC AATCCCGCTT CGGTCTTCCT GTGGGCACGC CGCAGGATTC TACTCCGGGC GTGTGGGATG TTGGGTTTTA TGGTCAAGTG CTGGATCCTC CACCGGCGAT TGGAAGGTTT GAAAGTGATG TCCATTTGAG TCAGAATTTG TCAGGGGATG GCGCTGGAGT GCATTTTCGG GGCTTTGTGG GCAGGCAGCG GGAGTGGGGA GATGCGTTTG CGAGCGCGTG GGAGATGTTG AGTTTGCTTG GTTTGCCGGA GAGTGAGAGA
GCGGAGATGG GGGATTGTAC GGAGGTGGTT GTTGGGGTGT TTTTG

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA