Entry information : SpopCIIAC
Entry ID 8545
Creation 2011-09-27 (Christophe Dunand)
Last sequence changes 2011-09-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-09-04 (Catherine Mathe (Scipio))
Peroxidase information: SpopCIIAC
Name SpopCIIAC
Class Asco Class II type C    [Orthogroup: CIIAC001]
Taxonomy Eukaryota Fungi Ascomycota Dothideomycetes Mycosphaerellaceae Mycosphaerella
Organism Septoria populicola (Mycosphaerella populicola)    [TaxId: 215467 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpopCIIAC
start..stop
S start..stop
MpopCIIAC 524 0 1..334 12..350
CzmCIIAC01 361 9e-126 61..334 27..298
ZcelCIIAC03 346 3e-118 55..334 132..408
MpiCIIAC[P]02 308 2e-104 56..330 46..319
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 200029..201033 1005  
complement(join(200029..201033))


exon

Literature and cross-references SpopCIIAC
DNA ref. JGI genome:   scaffold_16 (201033..200029)
Protein sequence: SpopCIIAC
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   335
PWM (Da):   %s   35062.22  
PI (pH):   %s   5.72
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSLCSHLAVS AFSETIINPG PNGQSKISSA IKTSTSTFPP LVSSKSSASS PTSTTCPDFW TAVVSDLASN MRSNNGQCND ISRASIRFAF HDAATFSSKL PFYAPAAGGA DGSLLLSPTE  IDREDNDGLH DYHAFLSSKL HSYQQTSGYA LSAADLVQIA GATGILACPG GRIGRVFVGR KDSSEASPPH LLPHAFGLGS DHNSLVALFA DKGFSPRDLA ALVGAHSTSI AKFQSRFGLP 
VGTPQDSTPG VWDVGFYGQV LDPPPAIGRF ESDVHLSQNL SGDGAGVHFR GFVGRQREWG DAFASAWEML SLLGLPESER AEMGDCTEVV VGVFL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGCCTGT GCAGCCATCT AGCCGTCAGT GCCTTTTCGG AAACCATCAT CAACCCAGGA CCCAACGGCC AGTCCAAAAT TTCGTCGGCC ATCAAGACGA GTACCAGCAC CTTTCCTCCT  CTCGTCTCAT CGAAATCCTC AGCTTCTTCG CCGACTTCGA CAACATGTCC AGACTTCTGG ACGGCGGTAG TATCCGATCT AGCATCGAAC ATGCGTAGCA ACAACGGACA ATGCAACGAC  ATCTCTCGAG CATCCATCCG CTTCGCCTTC CACGACGCCG CCACCTTCTC CTCCAAACTC CCCTTTTACG CACCCGCCGC AGGCGGCGCA GACGGCTCCC TCCTCCTCTC GCCCACGGAA  ATCGACCGCG AAGACAACGA CGGACTACAC GACTACCACG CCTTTCTCAG CTCCAAATTG CACTCCTACC AACAAACCTC CGGCTACGCC CTCAGCGCCG CAGATCTCGT CCAAATCGCC  GGAGCAACAG GAATTCTCGC CTGTCCCGGC GGCCGCATCG GCCGCGTGTT CGTCGGACGC AAAGATAGCT CCGAAGCTTC TCCTCCCCAT CTTCTCCCGC ACGCCTTCGG GCTCGGATCC  GATCATAATT CTCTCGTAGC CCTCTTCGCC GACAAAGGCT TCTCTCCTCG AGACCTCGCT GCTCTCGTCG GTGCGCATAG TACCTCGATT GCGAAATTCC AATCCCGCTT CGGTCTTCCT  GTGGGCACGC CGCAGGATTC TACTCCGGGC GTGTGGGATG TTGGGTTTTA TGGTCAAGTG CTGGATCCTC CACCGGCGAT TGGAAGGTTT GAAAGTGATG TCCATTTGAG TCAGAATTTG  TCAGGGGATG GCGCTGGAGT GCATTTTCGG GGCTTTGTGG GCAGGCAGCG GGAGTGGGGA GATGCGTTTG CGAGCGCGTG GGAGATGTTG AGTTTGCTTG GTTTGCCGGA GAGTGAGAGA 
GCGGAGATGG GGGATTGTAC GGAGGTGGTT GTTGGGGTGT TTTTG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGCCTGT GCAGCCATCT AGCCGTCAGT GCCTTTTCGG AAACCATCAT CAACCCAGGA CCCAACGGCC AGTCCAAAAT TTCGTCGGCC ATCAAGACGA GTACCAGCAC CTTTCCTCCT  CTCGTCTCAT CGAAATCCTC AGCTTCTTCG CCGACTTCGA CAACATGTCC AGACTTCTGG ACGGCGGTAG TATCCGATCT AGCATCGAAC ATGCGTAGCA ACAACGGACA ATGCAACGAC  ATCTCTCGAG CATCCATCCG CTTCGCCTTC CACGACGCCG CCACCTTCTC CTCCAAACTC CCCTTTTACG CACCCGCCGC AGGCGGCGCA GACGGCTCCC TCCTCCTCTC GCCCACGGAA  ATCGACCGCG AAGACAACGA CGGACTACAC GACTACCACG CCTTTCTCAG CTCCAAATTG CACTCCTACC AACAAACCTC CGGCTACGCC CTCAGCGCCG CAGATCTCGT CCAAATCGCC  GGAGCAACAG GAATTCTCGC CTGTCCCGGC GGCCGCATCG GCCGCGTGTT CGTCGGACGC AAAGATAGCT CCGAAGCTTC TCCTCCCCAT CTTCTCCCGC ACGCCTTCGG GCTCGGATCC  GATCATAATT CTCTCGTAGC CCTCTTCGCC GACAAAGGCT TCTCTCCTCG AGACCTCGCT GCTCTCGTCG GTGCGCATAG TACCTCGATT GCGAAATTCC AATCCCGCTT CGGTCTTCCT  GTGGGCACGC CGCAGGATTC TACTCCGGGC GTGTGGGATG TTGGGTTTTA TGGTCAAGTG CTGGATCCTC CACCGGCGAT TGGAAGGTTT GAAAGTGATG TCCATTTGAG TCAGAATTTG  TCAGGGGATG GCGCTGGAGT GCATTTTCGG GGCTTTGTGG GCAGGCAGCG GGAGTGGGGA GATGCGTTTG CGAGCGCGTG GGAGATGTTG AGTTTGCTTG GTTTGCCGGA GAGTGAGAGA 
GCGGAGATGG GGGATTGTAC GGAGGTGGTT GTTGGGGTGT TTTTG 

Retrieve as FASTA