Entry information : RcoAPx03 (RcApx3)
Entry ID 8548
Creation 2011-02-24 (Christophe Dunand)
Last sequence changes 2011-02-24 (Christophe Dunand)
Sequence status partial
Reviewer Achraf Jemmat
Last annotation changes 2015-11-09 (Achraf Jemmat)
Peroxidase information: RcoAPx03 (RcApx3)
Name (synonym) RcoAPx03 (RcApx3)
Class Ascorbate peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Rubiaceae Rubia
Organism Rubia cordifolia    [TaxId: 339321 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RcoAPx03
start..stop
S start..stop
CanAPx03 202 5.17e-67 1..105 113..217
CanAPx05 201 6.31e-67 1..105 112..216
LeAPx05 201 9.72e-67 1..105 113..217
StAPx05 199 8.22e-66 1..105 113..217
Literature and cross-references RcoAPx03 (RcApx3)
Literature Shkryl,Y.N., Veremeichik,G.N., Bulgakov,V.P., Gorpenchenko,T.Y., Aminin,D.L. and Zhuravlev,Y.N. Decreased ROS level and activation of antioxidant gene expression in Agrobacterium rhizogenes pRiA4-transformed calli of Rubia cordifolia. Planta 232 (5), 1023-1032 (2010)
mRNA ref. GenBank:   GU949550.1
Protein sequence: RcoAPx03 (RcApx3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   105 (315)
PWM (Da):   %s   11641.1 (34411.9)  
PI (pH):   %s   8.98 (5.39) Peptide Signal:   %s   cut: 23 range:23-337
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

FVPGRKDSKI SPREGRLPDA KKGVPHLKEI FYRMGLSSKD IVALSGGHTL GKAHPERSGF DGPWTKEPLK FDNSYFVELL KGESEGLLKL PSDFALLEDP EFRHF 

Retrieve as FASTA  
Remarks
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTTGTTCCAG GCAGAAAGGA TTCAAAGATT TCCCCGAGGG AAGGGAGGCT CCCTGATGCT AAAAAAGGTG TTCCACACTT GAAGGAAATT TTCTATAGGA TGGGTTTGTC CAGCAAAGAT  ATTGTGGCCT TATCAGGCGG CCACACTCTG GGAAAGGCCC ATCCAGAGAG ATCAGGATTT GATGGTCCAT GGACTAAGGA ACCACTGAAA TTTGATAATT CATACTTTGT TGAGCTGCTT 
AAAGGAGAAA GTGAAGGGCT GCTGAAACTT CCATCTGATT TCGCTTTACT TGAAGATCCT GAATTTCGCC ATTTT 

Retrieve as FASTA