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Entry information : VcaCcP01 (84225 / apx3)
Entry ID 8559
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2012-06-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-08-10 (Christophe Dunand)
Peroxidase information: VcaCcP01 (84225 / apx3)
Name (synonym) VcaCcP01 (84225 / apx3)
Class Cytochrome C peroxidase    [Orthogroup: CcP001]
Taxonomy Eukaryota Viridiplantae Chlorophyta Chlorophyceae Volvocaceae Volvox
Organism Volvox carteri    [TaxId: 3067 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VcaCcP01
start..stop		 S start..stop
VauCcP01 652 0 1..375 1..373
VauCcP01-B 591 0 21..375 1..336
VgCcP 563 0 1..370 1..374
VauCcP01-C 555 0 21..375 1..323
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8559' 'join(93..269,528..659,1381..1553,1772..1917,2138..2226,2586..2770,3236..3341,3670..3714,3876..3956)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 93..269 175 N° 2 528..659 130 N° 3 1381..1553 171 N° 4 1772..1917 144
N° 5 2138..2226 87 N° 6 2586..2770 183 N° 7 3236..3341 104 N° 8 3670..3714 43
N° 9 3876..3956 79  
join(93..269,528..659,1381..1553,1772..1917,2138..2226,2586..2770,3236..3341,367 0..3714,3876..3956)


exon

Literature and cross-references VcaCcP01 (84225 / apx3)
Protein ref. UniProtKB:   D8UGR8
DNA ref. GenBank:   NW_003307623.1 (424792..420930)
Cluster/Prediction ref. UniGene:   Vca.8185
Protein sequence: VcaCcP01 (84225 / apx3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   377 (518)
PWM (Da):   %s   40338.32 (55104.5)  
PI (pH):   %s   8.06 (7.07) Peptide Signal:   %s   cut: 0 range:Ymax-517
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATSAPRMLRLGSLLARQAAPSSLLQQQFRTFSDNAAAEAAKAAPEAVKADSGSKGKIRGVQALIFGGLGAGMLYGYSLFTSQPPPSGPLAGPPTLPTGTAPKTSTPGDYAAVRDSISSL
LEAADYDDGSYGPLLVRLAWHASGTYDKSSCTGGSNGATMRFPPECEWAANRGLAIARQLLEPVKAAHPWISYADLWTLAGVVAIEDMGGPSVAWRPGREDYSDGSKIVPDGRLPNATLG
AKHLRDIFHRMGFDDRDIVALSGAHTLGRCHPDRSGFSGPWTNAPTTFSNLYFQELVNNKWRPKKWDGPLQYEDAKTGTLMMLPTDLALLSDRTFKKYVAQYAKDEEAFFKDFAVAFGKL
LELGVPFPSAEKAAATS*

Retrieve as FASTA  
Remarks Complete sequence from genomic and ESTs. Strain="Eve".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTACGTCGGCCCCACGCATGCTGCGGTTGGGATCGTTGCTTGCCCGGCAGGCGGCTCCCTCATCCCTTCTGCAGCAGCAGTTCCGGACGTTTTCCGACAATGCCGCTGCGGAGGCA
GCCAAAGCAGCTCCAGAGGCTGTTAAGGCAGACTCAGGGTCGAAGGGCAAGATTCGGGGGTGCGTGAACTGACTATTCCGTGTCTCTGGATCATCAGGGGTGTTGCCAACGTGGCGAACT
GCCATGGCCATCTGGGAGTTGCCAGAGCGGAAAAACTCAGAAGGAATTGCCCTGCGGAATGATGTAAAATTGTAGGCTATTCTACAGGTCATTTCGATGGTCAAGCCAGTCATATGTCCT
GTCCAAAGTCCATCGGGTATCACTTGCTCGCCTTTGTTGACTGTCTCTCCCTCTTTTCCTTACACGACTATTTGCAGGGAGTCCAGGCGCTGATTTTTGGCGGTCTAGGCGCTGGCATGT
TGTACGGGTACTCGCTTTTCACGTCGCAGCCTCCTCCATCTGGACCCCTGGCCGGGCCTCCAACGCTGCCCACCGGGACTGCCCCGAAGAGGTGAGGCCACTTGCTCTGTCGCCTTGGCC
CTCACAGATCAGCATGGTCGGCGTCTGGCGATGTAGTTCTCGGTTCTCCTCCTGAAACACACTGTCGGAGCTTCTGCTGTTGGGTGCCGGATAGGCCTGTCGCGTCTGTGGCCAGTCTTC
GAGAGGTGGTCCAGGACAGACATTTTGCCAGATGCATGGCGGCCGGGATCAGGTTGGGATCGTTTGCTGATTGGGGGATCGTGCGACAGGCGCAGTGTTCTTCTATCTTTCATTTTGTAT
GGGGCCGGTCTTAACACGACTTAACACACCGGTTGGTGGCACCGCGTCCCCTATCCCTGCCCGCCGATGCTCGCGCTGCCCAGCGAGCAGCTTTATTGGCAACAGCCACACGGCGCTGCC
ATCACAAGCCCCCACGCGCAACACATTTCGCGTCTGGGTGCTTTTCGCCCCTGTGCTCCTACCTCAACCAATCCTGTGCCCATGTTCCCATGAACACCCCCTTGCGCTCCCTCTCACGGT
GTTGACTACACCGGGGGCATGCCAGCCACCAACACCAGCAACCCTTTCGTCCGCCACCTTCACTGATAGTACTAGGCCACCGCGGGCCAGTCCTTTGACCCTGACCATTCTGTTTTGTCT
TCCTCAGCCTTCACACCTTGCAGACTTGCCCGTGCGTTTCCTTCCTTAACTTGGTTGTTGCCAAATTTTCGCCTCGCATGTATTCCCCACAGACTTCGACTCCGGGTGACTACGCTGCGG
TTCGTGATTCCATCTCTTCCCTCCTAGAAGCTGCGGATTATGACGACGGTTCATACGGCCCGCTGCTGGTACGGCTTGCTTGGCACGCATCTGGCACGTACGACAAGAGTAGTTGCACCG
GCGGCTCCAACGGCGCGACCATGAGAGGTGAGATGTCGGCTAACTTAAGGTGGGATGTGGTATGGTGTCGTACACGCACGTGGCATAGTGGACGTCTGTTACTGGAAGGGGCGTGAGGGC
GAGCACGGAGGATGCATGAGCCTCTCGCGTGTATCTGAGTCCGGGAGTTGCCTGGTGGTTTTAGGCGGCATCAGTATCTGGATTGACATTCTCTGTTTGTACCTTCTCACCGTTTCTGAT
GACAGGTTCCCTCCCGAATGCGAGTGGGCTGCCAATCGCGGTCTGGCCATTGCCCGCCAGCTGTTGGAGCCGGTGAAGGCGGCCCACCCCTGGATCAGCTACGCGGACTTGTGGACGCTG
GCGGGAGTAGTGGCCATCGAGGACATGGGGGGGGTGAGGCGGGGTGGGGGACCGGGGGTGAGGCGGGGTGGGGGACCGGGGCCGGGGGAATTAGAAAATGTGGGGCATTGTTGGAGTGCA
TGTGGGTTGCTCTTGGTGGGAGCGTACCATACCTGCTGTTGATTAGGTTAAGCCGTTCAAAAGCCGCCTCCTGACCCGACATCCAAAGCTCTATGCAACCCTTCCCAACCGCCCTCCATT
CCCACTGCTCCAGGTCCCTCGGTGGCATGGCGACCAGGCCGGGAGGACTACTCGGACGGATCCAAGATTGTGCCGGATGGCCGACTGCCGAATGCGACTCTGTGGTGCGTGGCGATCTCC
CGAGGGGGTTTAGAAAGGGGGGTTGCTGAGTCAGCGGCCGAGTCAGCAAGGAGTAGAACATTGTAAGGAGAGAAGGGGTAATCCGAGGGACAAGGTAATCTGAGGACGTCTGGGAACTCC
CGCGGTGTATTTGTGTGCCGTACTGCTCCCCCGATGTGCACGGGATATGTGTACCTCGAGTTGGGGGATTCACATCGTCCGCCCTCGCTGCGCCGCAACTCCCTGTGACCTATCCCCCTC
ATTTGCCGGTAGACTACGTTTCCGGGCTCATTTCCACCGCCTCGCGTTCCTGCTAACAGTCCTGCGCGCCCACTCAACTACTCGCTTCCCTCACCTCGGCCAGGGCGCCAAGCACCTCCG
GGACATTTTCCACCGCATGGGGTTTGACGACCGGGACATTGTGGCCCTCAGCGGGGCGCATACGCTGGGTCGCTGCCACCCGGACCGCAGCGGTTTCTCCGGGCCTTGGACCAACGCCCC
CACCACCTTCTCCAACCTGTACTTCCAGGAGCTCGTCAACAACAAATGTGGTGAGAGGAGCGGGGGAGGGAAGAGGAAGGGTCGGATCTGGGCGGCAGAGTCAGGGGGGTTGGATTGGAA
CGCTATTAGTCAGGAGGCGGGAGGCGCCGACATGGTTAGGGGCCCTCTAGAGGGTTCATAGAGGGGGAGGGGGCAGGGGGCTGTGGGAGCGGAAGATGGCCGTGGGGGGCTCATGACGCG
AATGGACGCCCATGCACGTATTGATCGTCGCTGTTCACTTTGCACACGGCACAGCACGTTCATAAACGGTGCACTATACCCAATCATTATTATTGTTCCGGGCTGTTCCTAACTTGTACT
GTAGTTGATACCGCCTGTGTGCCGTTTTCAAGGATTCAACCGCCGCATGTATGTCTGATGACTTGCCGCACACCGCACCTCACTTGGGGTCCTCACCCAGCCTAACACGACCCGACCCGG
GTCCGCCGCTGTCCCCGATGTCTGTCTGCGTCCAGGCGCCCTAAGAAGTGGGACGGTCCTCTGCAGTACGAGGACGCCAAGACCGGCACCCTGATGATGCTGCCCACTGACCTGGCCTTG
CTGTCGGACAGGACCTTCAAGAGGTGCGGTTGCGGAGCGGGGGGCCTGGGGTTCGCTTTGTGATTTGGTGACTTACGTAACTGTAGTTCAGCTATGGAGCAGCACTTCGGTTGACGGCAG
CAGCAGCAAATTGTGTAATGTGAAGTCACAGCCATCAGTCCCTTTCCCGACCTCAGGCGGACACGGGGTACACGTGCTTAGATGTTGGCCGAGACTTTCTATTCGTAATTCCTGGTGTGA
TGTTTTTGAATCTAGTTTCTGAATCTACGTTCGCTCGTTCGAAAGTCCACCCGTGTCCCGATGCTACTGACCCAGCGACCCGCTGACCCGCTGCCACCACCCGGAGTGCAGAAATACGTC
GCTCAGTACGCCAAGGATGAAGAGGCGTTTTTCAAGAGGTACGCCCTCTTACACACAGCTGCTTAATCCCGTCTCGTGGTTTCCTCCCGGTTGGGTTCCTGACGAGCGACAGAAAGCAGT
GCCACCATCATCATCGTCGTCGTCATCGCATTTGGAAACACCTCTTGAATCCCTTTCTCCCCCATGGACTGCCCGCCAGGACTTTGCCGTGGCGTTTGGCAAGCTGCTGGAGCTGGGAGT
ACCGTTCCCTTCGGCGGAGAAGGCGGCCGCCACGTCTTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTACGTCGGCCCCACGCATGCTGCGGTTGGGATCGTTGCTTGCCCGGCAGGCGGCTCCCTCATCCCTTCTGCAGCAGCAGTTCCGGACGTTTTCCGACAATGCCGCTGCGGAGGCA
GCCAAAGCAGCTCCAGAGGCTGTTAAGGCAGACTCAGGGTCGAAGGGCAAGATTCGGGGAGTCCAGGCGCTGATTTTTGGCGGTCTAGGCGCTGGCATGTTGTACGGGTACTCGCTTTTC
ACGTCGCAGCCTCCTCCATCTGGACCCCTGGCCGGGCCTCCAACGCTGCCCACCGGGACTGCCCCGAAGACTTCGACTCCGGGTGACTACGCTGCGGTTCGTGATTCCATCTCTTCCCTC
CTAGAAGCTGCGGATTATGACGACGGTTCATACGGCCCGCTGCTGGTACGGCTTGCTTGGCACGCATCTGGCACGTACGACAAGAGTAGTTGCACCGGCGGCTCCAACGGCGCGACCATG
AGGTTCCCTCCCGAATGCGAGTGGGCTGCCAATCGCGGTCTGGCCATTGCCCGCCAGCTGTTGGAGCCGGTGAAGGCGGCCCACCCCTGGATCAGCTACGCGGACTTGTGGACGCTGGCG
GGAGTAGTGGCCATCGAGGACATGGGGGGTCCCTCGGTGGCATGGCGACCAGGCCGGGAGGACTACTCGGACGGATCCAAGATTGTGCCGGATGGCCGACTGCCGAATGCGACTCTGGGC
GCCAAGCACCTCCGGGACATTTTCCACCGCATGGGGTTTGACGACCGGGACATTGTGGCCCTCAGCGGGGCGCATACGCTGGGTCGCTGCCACCCGGACCGCAGCGGTTTCTCCGGGCCT
TGGACCAACGCCCCCACCACCTTCTCCAACCTGTACTTCCAGGAGCTCGTCAACAACAAATGGCGCCCTAAGAAGTGGGACGGTCCTCTGCAGTACGAGGACGCCAAGACCGGCACCCTG
ATGATGCTGCCCACTGACCTGGCCTTGCTGTCGGACAGGACCTTCAAGAAATACGTCGCTCAGTACGCCAAGGATGAAGAGGCGTTTTTCAAGGACTTTGCCGTGGCGTTTGGCAAGCTG
CTGGAGCTGGGAGTACCGTTCCCTTCGGCGGAGAAGGCGGCCGCCACGTCTTAG

Retrieve as FASTA