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Entry information : VcaAPx03 (82395)
Entry ID 8562
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2015-12-16 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-12-16 (Achraf Jemmat)
Peroxidase information: VcaAPx03 (82395)
Name (synonym) VcaAPx03 (82395)
Class Ascorbate peroxidase    [Orthogroup: APx2002]
Taxonomy Eukaryota Viridiplantae Chlorophyta Chlorophyceae Volvocaceae Volvox
Organism Volvox carteri    [TaxId: 3067 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VcaAPx03
start..stop		 S start..stop
CreAPx02 526 0 10..326 9..326
RobtAPx04 376 2.29e-131 29..319 1..266
SsAPx04_AU1 378 6.85e-131 29..319 79..344
SpraAPx04 375 1.8e-129 29..326 76..348
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8562' 'join(590452..590658,590741..590822,591454..591527,592084..592113,592334..592421,592844..592993,593798..593955,594359..594435,594736..594853)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 590452..590658 205 N° 2 590741..590822 80 N° 3 591454..591527 72 N° 4 592084..592113 28
N° 5 592334..592421 86 N° 6 592844..592993 148 N° 7 593798..593955 156 N° 8 594359..594435 75
N° 9 594736..594853 116  
join(590452..590658,590741..590822,591454..591527,592084..592113,592334..592421, 592844..592993,593798..593955,594359..594435,594736..594853)


exon

Literature and cross-references VcaAPx03 (82395)
DNA ref. Phytozome 12:   scaffold_37 (590452..594853)
EST ref. GenBank:   FD837211.1 [5' end]
Protein sequence: VcaAPx03 (82395)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326
PWM (Da):   %s   35279.75  
PI (pH):   %s   8.11
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MQTCFPKGTTKRAFVGSCRRRTPTVCVRAAVNVEQLKALRQELFSYINSRGCNPIIVRLGWHDSGTYDKNIAEWPARGGATGSIRFKPEIDHAANKGLAIALGILGPMKKKFPEVSYADL
FQMASAVAVEAAGGPKIPMRYGRKDATSPEQCVPDGRLPGAAHPFADGSTSPAEHLRRVFGRMGLTDQEIVVLSGGHTLGRARPERSGFGADKTKYTDVGPGTSSASPSGSPDRPVTPKP
VGQLGTSWTANWLEFDNSYFTEVKAKRDADLLVLPTDACLFEDDGFRPYAEKYAADQEAFFADYALAQQKLSELGVEWDEGAPVTI*

Retrieve as FASTA  
Remarks Complete sequence from genomic (8 introns) and 3 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAGACCTGCTTCCCGAAGGGCACAACTAAACGGGCTTTCGTCGGCTCATGCCGTCGAAGGACTCCTACGGTGTGCGTTCGTGCGGCTGTCAACGTCGAGCAACTTAAAGCTCTCCGG
CAGGAGCTGTTCAGCTACATCAACAGTCGTGGCTGCAACCCCATCATCGTCCGCCTTGGTTGGCATGACAGCGGCACCTACGACAAGAGGTATGAATGAATTTGGCTTATTTGGGCGTGC
TCTCGCGAAGCAAACCGAGCTTCCATTTTGCGGGATGTCGCCATGCTGCAGAACATCGCCGAATGGCCCGCTCGCGGGGGTGCAACTGGTTCCATTCGCTTCAAACCGGAGATCGATCAT
GCTGCGAATAAGGGGGTAAGCCATGAGGGTTGCATCTCGGTTGGATGCTTGCAACTGGGACGCAAGCAAATGCTGGACTATTTGATTCGGCAATTGGCCTCAGGTTGATTGACTGGCGGC
GGTGAAAGCCAGCGTTTGCATCGCGGGGACGACTGTATCCATCCGATCAATTGTGGAAGTGTCGGAGGTTAAATTTTAGGAGAAATTCTCGGCTGCATTTGACCATACGATAGCTCGCGG
ATAATGTATCATTACATCTTACGATTTCTTGCGTGTGTTTAGGCTCCTGATCGACTGCCTGGATGTTGGTCAGTGTCGGCCCAGAAGCGTCCGCAACGTACTGCGCTCATACCTGAAGTA
AATGGATTTTTGCCTTGGGGTTCACCTAGATCATGTGCCTCCATAAAATTTTCCTTCGCGGAAGAGGTTAACGACGACCAACCGCGACATGGCAAAATGGGATGCTATACTTGCTCAACC
TGGCATTTCCATATGGCTTAACACAGCTTAGACAATGATACCTTCCTTTACAGAGAGTAATATCGTATGGAGATCATTTGATGACATGTCGTCCGCAGCTTGGAGAACCTTTTCGTCTTT
CCAACCCTTTTGGCCCCGATGCTCTGCCGTTGACAATCTTTCCCAGGCCTAGCCATCGCACTGGGCATCCTGGGACCCATGAAGAAGAAGTTCCCCGAAGTGTCCTACGCTGACCTGGTA
TACGGCAGGGAAGGGTCTGAGACTTGGGCGAAGGGGGCATCCGGAATAACCCGGAGTGCGGAATCTCAGAATGACGCAGCTCGACCCACAATTTCAGTAGTCCTCCATGTCCCATAAAAT
CATTCAGATGCAACTCAGCATAGCGAAGCACTCCCATATCTTCACATCAGCTCCCAATCAGATCCCGGCAGTTAAACTCACCAGGTTCCAGGCGTAATTGTTGCGCCGGGTGCTTACCCG
AATGGCGGGGCTCAATCCTTCCTTGGCTCCAACCGCTGTTTTCCAGAACCCGGCTTTGTTTCCCAACTACTCCTTGTTAAGAGCCAGATCGTGCTGTATGTTTGATCTATCAGCGCCCTA
CCTTTTCTCCATGAGAAAGGTTGGTTCTCCTCCAGCCCGGTGTGAACGTTTTTTCCATCCCCATGTGAAAGGGCGTTTAGGACGAACTCCTCTTCAAAGGCTCAACGTCCCTCCCTCCCC
GCTTCCCCTCTTCCCGCCCTTCCCCTTGCTTGTCCCTTGGCTCATTTGCCGGGTCGTGTTCACCGCGGTGCGGTGCAGTTCCAAATGGCCTCTGCGGTGGCTGTGGAGAGGTGAGCGGAT
GGGGGCAAGGGCAGGGTAATGAGTGTGCGCACATTTGCGCTTGCGTAATGGCCTACGTGTGCGTGTTATGTGTGCGTGATCTCTTCCAGGTTCCACCTCTTTCTTTCTTCGCTCCTTGTA
CCTGCCCTTTCCGTCGTCCCTCACCCTCCCTCCTGGCAATCACGTCCTTTTCCTTGTCTCTCCCTGTACCTGCTCTTCGCCCCTTGCCAGGCAGCTGGAGGTCCCAAGATTCCAATGCGC
TATGGCCGCAAGGACGCCACCAGCCCCGAGCAGTGTGTACCGGATGGCCGCCTGCCTGTGGTGGGCCTGGGGGCCTTGGGGTTGTTAGGAGGCCGGGAACCCCCCATCATCAAAGGTCGA
ATTGGGAATTGAGACATTAGAAAGACCGTGGCCGAGAACCGACCCACGGGTCAACGATTTAAGTTCGTGGGGGAAGTACGAGTGGCTCCAGGCCACTAGCCCTGAATCTCTGGCCGTGTT
TATCCTTTCCTGACCCACCCCCATTTATCGTTCCCACCCTTCCACCTGCCTCTCACCACCCTTCCCTCAGCTTTAGGGGAAACTGTGCAGCGGATTAGTAATGCATCTTGATTTCCTCCC
CCTAACCCCCCTGGGCCCTTCGAGGGAACCGAGGTCCCTACCCATACCAGGATGACATGTCCTTGCCCACGCACTCGAGTGGCCCGTCCCGCCCTCCCGTCCTGCCCGGGGTCGACACGC
AGGCGCCGCGCACCCGTTCGCGGATGGCAGCACCAGTCCGGCGGAGCATCTCCGACGAGTGTTCGGCCGCATGGGGCTCACCGACCAGGAGATCGTGGTGCTGAGCGGGGGGCACACGCT
GGGCAGGGCCCGACCTGAGCGCTCCGGCTTCGCGGTGAGGCCGCGTCCGTGTGTATTGTGTTATGCGTATTGTGGGTCAAAACGGAAAGGAAATCCCACCATGCGAATCATAAGTCTGTG
CGTATGTATGTATGGGGGCGAGCCCTGTGGCTTGCTTCAAGGGAAGGCCGGGGGGAATGGGGCCTGAGTTTGTACGACGCGGCGGCACGCCAGGTTAGGCGTATGGAATGCGGCGATGAG
CACCATGCATCAGCAAAACCCACGACGTCAACTTGTCACGTTGTCGCAGCACGCGCACGGTGCTATGGCGGTGTCCACCAGTGGAGCCAGCGGCGCGTCCACCTCCCCGTATCCTCCTCG
GCCCGTATTGGGCCCTAGACCATTTTTACCCCTAATTTTTCTTGCATCGTCAGCCCCCACGCCGCATGCCCCCAGCCAGGGCCTTGGCCCATCAGTTGACAGCAGCCGCGGCTCTCCCGC
ATCTCTCCCCTCTCTCCTGTGTTGCCCTTGTTCACTATGTATAGCTTGCGTGACCTTGCTTGACATGACATGACATAACATAACCTAAACCATCACGCCCTTACGTCTATTCCGGCTATG
CCAATTTCTTTTGCATCACCGCTGCAAACGGGTCGCTTGAATAACATTTACAATAACCTTTCACCCTTTCATCTTATGACGACTTATCATCATCTCACCGTTTCCCGAACGATGTGACAC
CGCCTTCTTTTAAAAATTTCTACACCCTGTTTCACACCATACCCTGTTACATGTTGGGAGCTATTTATTAAAAGCTCGTGACCGGTCCCTGTAAACTCCGATAAAACCTTCTTCGCAGGT
GCTGATAAGACCAAGTACACCGATGTGGGTCCCGGCACGTCGTCCGCCTCGCCATCAGGTTCCCCCGACCGGCCCGTCACACCCAAGCCGGTGGGCCAGCTGGGGACCAGCTGGACAGCC
AACTGGCTGGAGTTCGACAACAGCTACTTCACAGAGAGGTACGTCGTGTGTGGGAAAAAGGGGGGAAAGTCCTCGTTGGCGGCAGGGAAGGGTTGGGAGGTAAGGAGAGAACGAAGACGG
GTGCTGGGGAGAGCGGGTGTTGTACAGAGCTGGGTTGTAAGCGACGGGGGGAGTTAGGGGCTTCAGGAGGGACGAGGCATTCAGTCCCTTATGGTTCCGGGGCGAGCCGTGGTTAGAGCT
TCGGAAGGCTTCGTCGTAAGGAGGGGGTTGGACATGGCCGCCCCTTTGTTGTGGTGTGTCTCGCATGGTCTGACGATTCCACCAACATCATCCTCTGTTCTCANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNATATAAGCTTAGTTAATGCTGCCACTGCTATGGCCACCGCGTTGTTCGGTTGCAGGTCAAGGCCAAGCGGGATGCGGACCTGTTGGTGCTGCCA
ACGGATGCCTGCCTGTTCGAGGATGACGGGTTCAGGTGTGGGAAGGCTGGGAGGCGTACATGAATTAGGGCGGGAACGGGTCGGGACTGTAGTGCGGAGGACTCTGCTGTGATGGGTCCA
AATCTCCTGTGCCAATCAATTGGCTCACCGCCGTTGAATCCGGTTTAGCGTCCTGAGTTTTTACCTTTCTTCGCCCTTCACACGCTTATCAGGTACCTGCCGCCCCGGGCCCCATTTCCA
TGCCCCATACTTTACCTGTCCCTGCTGCCCCTACCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACGTCTCCCCACAGGCCATATGCTGAGAAGTACG
CTGCTGACCAGGAGGCGTTCTTCGCAGACTACGCCCTGGCCCAGCAGAAGCTGTCGGAGCTCGGGGTAGAGTGGGATGAGGGAGCGCCAGTCACCATC

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAGACCTGCTTCCCGAAGGGCACAACTAAACGGGCTTTCGTCGGCTCATGCCGTCGAAGGACTCCTACGGTGTGCGTTCGTGCGGCTGTCAACGTCGAGCAACTTAAAGCTCTCCGG
CAGGAGCTGTTCAGCTACATCAACAGTCGTGGCTGCAACCCCATCATCGTCCGCCTTGGTTGGCATGACAGCGGCACCTACGACAAGAACATCGCCGAATGGCCCGCTCGCGGGGGTGCA
ACTGGTTCCATTCGCTTCAAACCGGAGATCGATCATGCTGCGAATAAGGGCCTAGCCATCGCACTGGGCATCCTGGGACCCATGAAGAAGAAGTTCCCCGAAGTGTCCTACGCTGACCTG
GTATTCCAAATGGCCTCTGCGGTGGCTGTGGAGGCAGCTGGAGGTCCCAAGATTCCAATGCGCTATGGCCGCAAGGACGCCACCAGCCCCGAGCAGTGTGTACCGGATGGCCGCCTGCCT
GGCGCCGCGCACCCGTTCGCGGATGGCAGCACCAGTCCGGCGGAGCATCTCCGACGAGTGTTCGGCCGCATGGGGCTCACCGACCAGGAGATCGTGGTGCTGAGCGGGGGGCACACGCTG
GGCAGGGCCCGACCTGAGCGCTCCGGCTTCGGTGCTGATAAGACCAAGTACACCGATGTGGGTCCCGGCACGTCGTCCGCCTCGCCATCAGGTTCCCCCGACCGGCCCGTCACACCCAAG
CCGGTGGGCCAGCTGGGGACCAGCTGGACAGCCAACTGGCTGGAGTTCGACAACAGCTACTTCACAGAGGTCAAGGCCAAGCGGGATGCGGACCTGTTGGTGCTGCCAACGGATGCCTGC
CTGTTCGAGGATGACGGGTTCAGGTGGCCATATGCTGAGAAGTACGCTGCTGACCAGGAGGCGTTCTTCGCAGACTACGCCCTGGCCCAGCAGAAGCTGTCGGAGCTCGGGGTAGAGTGG
GATGAGGGAGCGCCAGTCACCATC

Retrieve as FASTA