Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
226 |
| PWM (Da): |
24771.94 |
|
| PI (pH):
| 5.96 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
DDGLLLHE*N GVALLGDVRx SWVGVPILQA LFVKEHNAVC DAIKEEHPNL SDEELYGYAR LVTSAVIAKV HTVDWTVELL KTKTMRAGMR ANWYGLLGKK IEDTFGHIGG PTLGGLVGLK
KPINHGIPYS LTEEFTSVTL KLRDPTGQPD ANKSPTYLKD IDIGELVGLK GEEQLSKIGF EKKILSMGYQ ACGALELWNY PSFFRDLIPQ NLDRTNRSDR IDLASLE
|
Retrieve as FASTA
|
|
| Remarks |
Pseudogene from genomic. Partial and stop in frame. Incorrect prediction from phytozome. join(155877534..155877664,155877836..155877980,155878140..155878275,155878286..155878350,155878653..155878854) |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GATGATGGTC TTCTTTTGCA TGAGTAGAAT GGTGTGGCAT TATTGGGTGA TGTTCGCAnn AGTTGGGTTG GGGTTCCGAT CTTACAAGCT CTTTTTGTTA AGGAACACAA TGCAGTGTGT
GATGCAATAA AGGTAAGAGA AGCATCACTA TTATTATCTA TTTGTTTAGT TTATATGAAG AATTTGATGT TCTTGATTTC TTTCCACCGT ATCGATAAAG CTGTTGTTTA TTAATTACCA
AGACATTATT TTTTTATGCT AAAATATGAA GAAACAATTA AAAATGCTCT TTTAATATCT CAAGAAGAAC ATCCCAACCT ATCAGACGAA GAATTATATG GGTATGCTAG ATTGGTCACT
TCTGCTGTCA TTGCAAAGGT TCACACTGTT GATTGGACTG TCGAGCTTCT CAAGACTAAG ACCATGAGAG CTGGAATGCG TGCAAATTGG TGAGGATATA TTATCTCATT TTCTCATATT
TGTTGAAAGA AAACAATTAA CGCTGGTATT ACTTTTCCAA GTGGAAATTT TATTTACATC TGCATATTCA AATTAATTAA TTAGTGAGAT TGTGTACAAA TTTACCTCAT TCTAATTCTT
TTGTGAAGGT ATGGTTTATT GGGTAAGAAA ATAGAAGATA CATTTGGTCA CATAGGAGGA CCGACATTAG GTGGGCTCGT GGGATTGAAG AAGCCGATCA ACCATGGCAT ACCTTATTCT
TTGACTGAAG AGTTTACCAG TGTTTACAGA ATGCACTCTT AAGCTCAGGG ATCCGACCGG CCAACCCGAT GCAAATAAGT CCCCAACGTA CCTGAAAGAG TGAGTAGACA ATTTATATAT
GTTTGGCATC CATTCCTCTC ATTTTTATGT AGAATTAAAT CAGACAGAAA AGAGTGATAC AGATTATAAA GAATTGAACA AAAAAAGTTA AGACATTCTT CTATTAGATA TCGACTCTTA
CATAATGCAT TACTGAACCA GACTTTAGAC ACTGAACTTG ACACAACAAA CAACTACTCT TAAAAATGTA GCTAGAATGT ATAAGTTTTC TGCTCGATTA GCACATTTTA GTACAACTAA
CATAAACACC GAGTTAAATT CTTTCTTGTG TCGAAACATA GCATCGATAT TGGAGAGTTG GTTGGTCTTA AGGGGGAAGA ACAACTATCA AAAATAGGGT TTGAAAAGAA AATATTATCA
ATGGGATATC AAGCTTGTGG TGCACTTGAA CTATGGAACT ACCCAAGTTT CTTCAGGGAC CTCATACCAC AAAATTTGGA TCGTACCAAT CGATCTGACA GGATCGACCT TGCTTCCCTA
GAA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GATGATGGTC TTCTTTTGCA TGAGTAGAAT GGTGTGGCAT TATTGGGTGA TGTTCGCAnn AGTTGGGTTG GGGTTCCGAT CTTACAAGCT CTTTTTGTTA AGGAACACAA TGCAGTGTGT
GATGCAATAA AGGAAGAACA TCCCAACCTA TCAGACGAAG AATTATATGG GTATGCTAGA TTGGTCACTT CTGCTGTCAT TGCAAAGGTT CACACTGTTG ATTGGACTGT CGAGCTTCTC
AAGACTAAGA CCATGAGAGC TGGAATGCGT GCAAATTGGT ATGGTTTATT GGGTAAGAAA ATAGAAGATA CATTTGGTCA CATAGGAGGA CCGACATTAG GTGGGCTCGT GGGATTGAAG
AAGCCGATCA ACCATGGCAT ACCTTATTCT TTGACTGAAG AGTTTACCAG TGTTACTCTT AAGCTCAGGG ATCCGACCGG CCAACCCGAT GCAAATAAGT CCCCAACGTA CCTGAAAGAC
ATCGATATTG GAGAGTTGGT TGGTCTTAAG GGGGAAGAAC AACTATCAAA AATAGGGTTT GAAAAGAAAA TATTATCAAT GGGATATCAA GCTTGTGGTG CACTTGAACT ATGGAACTAC
CCAAGTTTCT TCAGGGACCT CATACCACAA AATTTGGATC GTACCAATCG ATCTGACAGG ATCGACCTTG CTTCCCTAGA A
|
Retrieve as FASTA
|
|