Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
228 |
| PWM (Da): |
25128.07 |
|
| PI (pH):
| 6.16 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
DDSLLLHAEN GVALLGDVRN SWVGISILQA LFVKEHNAVC DAIKEEHTNL SDEELYRYAR LVTSVVIAKV HTIDWTVELL KTKTMRDGMH ANWYGLLGKK IxKDTFGHIG GPTLGGLVGL
KKPINHGVPY CLTEEFTSVT LKLRDPTGQP DANNSPPYLK DIDIGELVGL KGEEQLSKIG FEKKILSMGY QACGALELWN YPSFFRDLIP QNLDRTNRSD RIDLAALE
|
Retrieve as FASTA
|
|
| Remarks |
Pseudogene from genomic Short part. incorrect prediction from Phytozome.
complement(join(13984199..13984400,13984704..13984768,13984779..13984915,13985075..13985220,13985395..13985526)) |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GATGACAGTC TTCTTTTGCA TGCGGAGAAT GGTGTGGCAT TATTGGGCGA TGTTCGCAAC AGTTGGGTTG GGATTTCGAT CTTACAAGCT CTTTTTGTTA AGGAACACAA TGCAGTGTGT
GATGCAATAA AGGTAAGAGA AGCATCACTA TTATTATCAT CTATTTGTTT AGTTTATATG AAGAATTTGA TGTTCTTGAT TTCTTTCCAC CGTACCGATA AAGCTGTTGT TTATTAATTA
CCAAGACATT AATTTTTTAT GCTAAAATAT GAAGAAACAA TTAAAAATGT TCTTTTAATA TCTCAGGAAG AACATACCAA CCTATCAGAC GAAGAATTAT ATCGGTATGC CAGATTGGTC
ACTTCTGTTG TCATTGCAAA GGTTCACACT ATTGATTGGA CTGTCGAGCT TCTCAAGACT AAGACCATGA GAGATGGAAT GCACGCAAAT TGGTGAGGAT ATATTATCTC GTTTTCTCAT
ATTTGTTGAA AGAAAACAAT TAACACTGGT ATTACTTTTC CAAGTGGAAA TTTTATTTAC ATCTGCAAAT TCAAATTAAT TAATTAGTGA GATTGTGTAC AAATTTACCT CGTTCTAATT
CTTTTGTGAA GGTATGGTTT ATTGGGTAAG AAAATAAnnA AAGATACATT TGGTCACATA GGAGGACCGA CGTTAGGTGG GCTTGTGGGA TTGAAGAAGC CGATCAACCA TGGCGTACCT
TATTGTTTGA CTGAAGAGTT TACCAGTGTT TACAGAATGC ACTCTTAAGC TCAGGGATCC GACCGGCCAA CCCGATGCAA ATAATTCCCC ACCGTACCTG AAAGAGTGAG TAGACAATTT
ATATATGTTT GGCATCCATT CCTCTCATTT TTATGTAGAA TTAAAGCAGT CAGAAAAGAG TGATACAAAT TATAAAGAAT TGAACAAAAA AAGTTAAGAT ATTCTTCTAT TAGATATCGA
CTCTTACATA ATGCATTACT GAACCAGACT TTAGACACTG AACTTGACAC AACAAACAAC TACTCTTAAA AATGTAGCTA GAATGTTTAA GTTTTCTGCT CGGTTAGCAC ATTTTTAGTA
TAACTAACAT AAACACTGAC TCAAATTCTT TCTTGTGTCG AAAAATAGCA TCGATATTGG AGAGTTGGTT GGTCTCAAGG GGGAAGAACA ACTATCAAAA ATAGGGTTTG AAAAGAAAAT
ATTATCAATG GGATATCAAG CTTGTGGTGC ACTTGAACTA TGGAACTACC CAAGTTTCTT CAGGGACCTC ATACCACAAA ATTTGGATCG TACCAATCGA TCTGACAGGA TCGACCTTGC
TGCCCTAGAA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GATGACAGTC TTCTTTTGCA TGCGGAGAAT GGTGTGGCAT TATTGGGCGA TGTTCGCAAC AGTTGGGTTG GGATTTCGAT CTTACAAGCT CTTTTTGTTA AGGAACACAA TGCAGTGTGT
GATGCAATAA AGGAAGAACA TACCAACCTA TCAGACGAAG AATTATATCG GTATGCCAGA TTGGTCACTT CTGTTGTCAT TGCAAAGGTT CACACTATTG ATTGGACTGT CGAGCTTCTC
AAGACTAAGA CCATGAGAGA TGGAATGCAC GCAAATTGGT ATGGTTTATT GGGTAAGAAA ATAAnnAAAG ATACATTTGG TCACATAGGA GGACCGACGT TAGGTGGGCT TGTGGGATTG
AAGAAGCCGA TCAACCATGG CGTACCTTAT TGTTTGACTG AAGAGTTTAC CAGTGTTACT CTTAAGCTCA GGGATCCGAC CGGCCAACCC GATGCAAATA ATTCCCCACC GTACCTGAAA
GACATCGATA TTGGAGAGTT GGTTGGTCTC AAGGGGGAAG AACAACTATC AAAAATAGGG TTTGAAAAGA AAATATTATC AATGGGATAT CAAGCTTGTG GTGCACTTGA ACTATGGAAC
TACCCAAGTT TCTTCAGGGA CCTCATACCA CAAAATTTGG ATCGTACCAA TCGATCTGAC AGGATCGACC TTGCTGCCCT AGAA
|
Retrieve as FASTA
|
|