Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
237 (206) |
PWM (Da): |
25483.82 (22112.2) |
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PI (pH):
| 5.28 (5.28) |
Peptide Signal:
| cut: 32 range:32-237 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MNPFSLNLTV SSSSNMIFCV FLSLLCVYSS SSELNTDYYL STCPDVHQIS ASVVKKFVSQ NPRMAASLIR LQFHDCFVQV xRC*DCSEFL SLLLNCMYCI GLLIEKNAAP NKNSICGLDV
IEEIKSKFEE KCPKTVSCAD IITLAARDSV VLSGGPTFEV PLGRKDSLTA NLTASDEDLP APxFDLSELL TFFERKGLHL VDLVALSGAH TIGLAKCNVV TARLYNKSAA SSFDVSLD
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic. Incorrect prediction from phytozome (3' end is missing; Stop in frame; Undetermined AA in frame). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAATCCAT TTTCACTAAA CTTAACAGTG TCTTCCTCTT CCAATATGAT TTTCTGTGTG TTCCTCTCCT TGCTGTGTGT TTATAGTTCT TCTTCTGAAC TGAATACTGA TTATTATCTG
TCCACATGTC CTGATGTTCA TCAGATTTCT GCTTCTGTCG TAAAGAAATT TGTCTCACAA AATCCTAGGA TGGCAGCGTC TCTGATACGC CTCCAATTTC ATGACTGTTT TGTCCAGGTC
nnnAGGTGTT AAGATTGTTC TGAATTTTTA AGCTTATTAC TAAACTGTAT GTATTGTATT GGACTACTCA TTGCATTAAA ACCTGTATTA AAGATTAATG GTTGTGTTTT ATCTTCTTGA
ATACAGGGTT GTGATTCTGT TGGATGACTC TAAAAACCAT AATAAGTGAA AAGAACGCTG CTCCTAACAA GAACTCGATC TGTGGACTGG ATGTAATAGA AGAGATCAAG TCCAAATTCG
AAGAAAAATG TCCCAAAACA GTTTCTTGTG CAGATATTAT AACATTGGCA GCTAGAGATT CAGTTGTGTT GGTAAGTACT AAGTAGCATA ACTGGTTTCT TCATAAATCT CTTGTTTAGC
ATTATAATTA ATTTTACTTC AGTCCTGTGA TTGATTTTGA TGTTGTGATA TAACAGAGTG GAGGTCCAAC TTTTGAGGTT CCATTAGGCA GGAAGGATTC CCTCACAGCC AACCTCACTG
CTTCTGATGA AGACCTCCCA GCACCATTnT TTGACCTGTC TGAGCTGTTA ACTTTTTTCG AACGTAAAGG TCTACACCTA GTTGATTTAG TGGCTTTGTC AGGAGCCCAT ACCATAGGGT
TGGCAAAATG CAATGTTGTG ACGGCAAGGC TCTATAACAA ATCTGCAGCA TCTTCCTTTG ATGTCTCTCT TGAT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAATCCAT TTTCACTAAA CTTAACAGTG TCTTCCTCTT CCAATATGAT TTTCTGTGTG TTCCTCTCCT TGCTGTGTGT TTATAGTTCT TCTTCTGAAC TGAATACTGA TTATTATCTG
TCCACATGTC CTGATGTTCA TCAGATTTCT GCTTCTGTCG TAAAGAAATT TGTCTCACAA AATCCTAGGA TGGCAGCGTC TCTGATACGC CTCCAATTTC ATGACTGTTT TGTCCAGGTC
nnnAGGTGTT AAGATTGTTC TGAATTTTTA AGCTTATTAC TAAACTGTAT GTATTGTATT GGACTACTCA TTGAAAAGAA CGCTGCTCCT AACAAGAACT CGATCTGTGG ACTGGATGTA
ATAGAAGAGA TCAAGTCCAA ATTCGAAGAA AAATGTCCCA AAACAGTTTC TTGTGCAGAT ATTATAACAT TGGCAGCTAG AGATTCAGTT GTGTTGAGTG GAGGTCCAAC TTTTGAGGTT
CCATTAGGCA GGAAGGATTC CCTCACAGCC AACCTCACTG CTTCTGATGA AGACCTCCCA GCACCATTnT TTGACCTGTC TGAGCTGTTA ACTTTTTTCG AACGTAAAGG TCTACACCTA
GTTGATTTAG TGGCTTTGTC AGGAGCCCAT ACCATAGGGT TGGCAAAATG CAATGTTGTG ACGGCAAGGC TCTATAACAA ATCTGCAGCA TCTTCCTTTG ATGTCTCTCT TGAT
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Retrieve as FASTA
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