The peroxidases and oxidases database
Entry information : AcoPrx57 (AcoGoldSmith_v1.015186m)
Entry ID 8607
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-12-14 (Qiang Li)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2011-12-14 (Qiang Li)
Peroxidase information: AcoPrx57 (AcoGoldSmith_v1.015186m)
Name (synonym) AcoPrx57 (AcoGoldSmith_v1.015186m)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Ranunculaceae Aquilegia
Organism Aquilegia coerulea     [TaxId: 218851 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AcoPrx57
start..stop		 S start..stop
NtPrx35-1B 216 7e-70 29..238 25..225
LePrx70 216 1e-69 16..238 5..225
NtPrx35-2A 215 2e-69 29..238 25..225
GmPrx273 214 4e-69 25..238 21..225
Literature and cross-references AcoPrx57 (AcoGoldSmith_v1.015186m)
DNA ref. Phytozome 12:   scaffold_20 (3407369..3408278)
Protein sequence: AcoPrx57 (AcoGoldSmith_v1.015186m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   237 (206)
PWM (Da):   %s   25483.82 (22112.2)  
PI (pH):   %s   5.28 (5.28) Peptide Signal:   %s   cut: 32 range:32-237
Sequence 0
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Send to Peroxiscan
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MNPFSLNLTV SSSSNMIFCV FLSLLCVYSS SSELNTDYYL STCPDVHQIS ASVVKKFVSQ NPRMAASLIR LQFHDCFVQV xRC*DCSEFL SLLLNCMYCI GLLIEKNAAP NKNSICGLDV 
IEEIKSKFEE KCPKTVSCAD IITLAARDSV VLSGGPTFEV PLGRKDSLTA NLTASDEDLP APxFDLSELL TFFERKGLHL VDLVALSGAH TIGLAKCNVV TARLYNKSAA SSFDVSLD 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from phytozome (3' end is missing; Stop in frame; Undetermined AA in frame).
DNA ►
Send to BLAST
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ATGAATCCAT TTTCACTAAA CTTAACAGTG TCTTCCTCTT CCAATATGAT TTTCTGTGTG TTCCTCTCCT TGCTGTGTGT TTATAGTTCT TCTTCTGAAC TGAATACTGA TTATTATCTG  TCCACATGTC CTGATGTTCA TCAGATTTCT GCTTCTGTCG TAAAGAAATT TGTCTCACAA AATCCTAGGA TGGCAGCGTC TCTGATACGC CTCCAATTTC ATGACTGTTT TGTCCAGGTC  nnnAGGTGTT AAGATTGTTC TGAATTTTTA AGCTTATTAC TAAACTGTAT GTATTGTATT GGACTACTCA TTGCATTAAA ACCTGTATTA AAGATTAATG GTTGTGTTTT ATCTTCTTGA  ATACAGGGTT GTGATTCTGT TGGATGACTC TAAAAACCAT AATAAGTGAA AAGAACGCTG CTCCTAACAA GAACTCGATC TGTGGACTGG ATGTAATAGA AGAGATCAAG TCCAAATTCG  AAGAAAAATG TCCCAAAACA GTTTCTTGTG CAGATATTAT AACATTGGCA GCTAGAGATT CAGTTGTGTT GGTAAGTACT AAGTAGCATA ACTGGTTTCT TCATAAATCT CTTGTTTAGC  ATTATAATTA ATTTTACTTC AGTCCTGTGA TTGATTTTGA TGTTGTGATA TAACAGAGTG GAGGTCCAAC TTTTGAGGTT CCATTAGGCA GGAAGGATTC CCTCACAGCC AACCTCACTG  CTTCTGATGA AGACCTCCCA GCACCATTnT TTGACCTGTC TGAGCTGTTA ACTTTTTTCG AACGTAAAGG TCTACACCTA GTTGATTTAG TGGCTTTGTC AGGAGCCCAT ACCATAGGGT 
TGGCAAAATG CAATGTTGTG ACGGCAAGGC TCTATAACAA ATCTGCAGCA TCTTCCTTTG ATGTCTCTCT TGAT 

Retrieve as FASTA  
CDS►
Send to BLAST
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ATGAATCCAT TTTCACTAAA CTTAACAGTG TCTTCCTCTT CCAATATGAT TTTCTGTGTG TTCCTCTCCT TGCTGTGTGT TTATAGTTCT TCTTCTGAAC TGAATACTGA TTATTATCTG  TCCACATGTC CTGATGTTCA TCAGATTTCT GCTTCTGTCG TAAAGAAATT TGTCTCACAA AATCCTAGGA TGGCAGCGTC TCTGATACGC CTCCAATTTC ATGACTGTTT TGTCCAGGTC  nnnAGGTGTT AAGATTGTTC TGAATTTTTA AGCTTATTAC TAAACTGTAT GTATTGTATT GGACTACTCA TTGAAAAGAA CGCTGCTCCT AACAAGAACT CGATCTGTGG ACTGGATGTA  ATAGAAGAGA TCAAGTCCAA ATTCGAAGAA AAATGTCCCA AAACAGTTTC TTGTGCAGAT ATTATAACAT TGGCAGCTAG AGATTCAGTT GTGTTGAGTG GAGGTCCAAC TTTTGAGGTT  CCATTAGGCA GGAAGGATTC CCTCACAGCC AACCTCACTG CTTCTGATGA AGACCTCCCA GCACCATTnT TTGACCTGTC TGAGCTGTTA ACTTTTTTCG AACGTAAAGG TCTACACCTA 
GTTGATTTAG TGGCTTTGTC AGGAGCCCAT ACCATAGGGT TGGCAAAATG CAATGTTGTG ACGGCAAGGC TCTATAACAA ATCTGCAGCA TCTTCCTTTG ATGTCTCTCT TGAT 

Retrieve as FASTA