Entry information : AcoPrx62 (AcoGoldSmith_v1.016792m)
Entry ID 8610
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-14 (Qiang Li)
Peroxidase information: AcoPrx62 (AcoGoldSmith_v1.016792m)
Name (synonym) AcoPrx62 (AcoGoldSmith_v1.016792m)
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Eukaryota Viridiplantae Streptophyta Ranunculaceae Aquilegia
Organism Aquilegia coerulea     [TaxId: 218851 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AcoPrx62
start..stop
S start..stop
NnPrx75 520 0 1..322 9..330
RcPrx21 514 0 15..322 27..334
CroPrx25 509 0 6..323 20..334
HaPrx56 509 0 3..322 10..329
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8610' 'join(177635..177829,177938..178138,178270..178435,178568..178974)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 177635..177829 193 N° 2 177938..178138 199 N° 3 178270..178435 164 N° 4 178568..178974 405
join(177635..177829,177938..178138,178270..178435,178568..178974)


exon

Literature and cross-references AcoPrx62 (AcoGoldSmith_v1.016792m)
DNA ref. Phytozome 12:   scaffold_17 (177635..178974)
Protein sequence: AcoPrx62 (AcoGoldSmith_v1.016792m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322 (304)
PWM (Da):   %s   34946.07 (32759.9)  
PI (pH):   %s   4.47 (4.41) Peptide Signal:   %s   cut: 19 range:19-322
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MFLLLVNLFLLHPYLSSAQLRQDFYANVCPNVENIVKEAVTTKFLQTFTTVPATLRLFFHDCFVQGCDASVMIASTPNNEAEKDHPENLSLAGDGFDTVIKAKAAVDAVPGCTNQVSCAD
ILAMATRDVIALSGGPSYAVELGRLDGLSSTSSSVGGKLPKPDFNLNQLNSMFSDNGISQIDMIALSAAHTLGFSHCDQFSNRLYNFSTSNKVDPTLNKTYAAQLMLQCPQKVDPEVAID
MDPSTPQEFDNVYFTNLQQGMGLFTSDQVLFTDDRSKPTIDTWASDTTAFEKAFVTAMTNLGRVGVKTGSQGNIRSDCSVFN*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTTCTGCTGCTAGTAAATCTATTTCTTCTCCATCCTTACTTGAGTTCAGCTCAACTTAGACAGGATTTTTATGCTAATGTGTGTCCAAATGTCGAAAACATCGTCAAAGAAGCCGTT
ACTACAAAGTTTTTGCAGACATTTACAACAGTCCCAGCAACTCTTCGTCTATTCTTCCATGATTGTTTTGTTCAG
AGGTTAGACAAACTTTTTGTAGTCTCAGACATACATACATGTATT
CTTATAATGTCTTGTAACTTCAAAGTTTAAAGTTTCAATATACAGTATGCTTGTATTATGTATAGGGTTGTGATGCATCAGTTATGATTGCCTCAACGCCTAATAACGAAGCTGAGAAAG
ACCATCCAGAGAATTTATCACTAGCCGGAGATGGATTTGATACAGTGATTAAGGCCAAGGCAGCAGTAGATGCAGTTCCAGGTTGTACAAACCAAGTTTCTTGTGCTGATATACTTGCTA
TGGCTACAAGAGATGTCATAGCTTTG
TGGTAATTGACTGATCACTAATCTCTCTCCATATGTAAACTTGTTGCACCATTAGGGTTGATAAGATTGTGTGCATTAATTTGAGCATGCTGAT
TGTTGGATTAATTGATCATATTCATTTCTATAAATACAGTCTGGAGGACCATCTTATGCAGTTGAGCTAGGAAGACTAGATGGGTTAAGTTCAACTTCCTCAAGTGTTGGTGGGAAATTA
CCTAAACCTGATTTCAATCTAAATCAACTCAATTCCATGTTTAGTGATAATGGAATTTCACAGATTGACATGATTGCTCTCTCAG
AGGTATATTAAATCTTTAAACTTATGGTTAATTGT
GATTAAGATAGCTAAATCACATGCATTGCATTAATCCCAAGAATAAGTCATTTGATTTTCTTTATGGGCCTAACAGAACTCTATAATTTCCTTTTGCAGCGGCCCATACATTGGGCTTTT
CTCATTGTGACCAGTTCTCAAATCGTCTTTACAACTTCAGCACATCAAATAAAGTGGATCCAACACTTAACAAGACTTATGCAGCCCAATTAATGTTGCAATGCCCACAGAAAGTGGATC
CTGAAGTAGCCATCGATATGGATCCAAGTACTCCACAGGAGTTTGATAATGTGTACTTCACGAATCTACAACAAGGCATGGGCCTTTTTACTTCGGACCAAGTTCTTTTCACAGATGATA
GATCCAAGCCCACTATTGATACTTGGGCTAGTGATACTACTGCTTTCGAAAAAGCATTTGTGACTGCTATGACCAATTTGGGTCGTGTTGGGGTTAAGACTGGATCACAAGGGAACATTC
GAAGTGATTGCTCAGTTTTCAACTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTTCTGCTGCTAGTAAATCTATTTCTTCTCCATCCTTACTTGAGTTCAGCTCAACTTAGACAGGATTTTTATGCTAATGTGTGTCCAAATGTCGAAAACATCGTCAAAGAAGCCGTT
ACTACAAAGTTTTTGCAGACATTTACAACAGTCCCAGCAACTCTTCGTCTATTCTTCCATGATTGTTTTGTTCAG
GGTTGTGATGCATCAGTTATGATTGCCTCAACGCCTAATAACGAA
GCTGAGAAAGACCATCCAGAGAATTTATCACTAGCCGGAGATGGATTTGATACAGTGATTAAGGCCAAGGCAGCAGTAGATGCAGTTCCAGGTTGTACAAACCAAGTTTCTTGTGCTGAT
ATACTTGCTATGGCTACAAGAGATGTCATAGCTTTG
TCTGGAGGACCATCTTATGCAGTTGAGCTAGGAAGACTAGATGGGTTAAGTTCAACTTCCTCAAGTGTTGGTGGGAAATTACCT
AAACCTGATTTCAATCTAAATCAACTCAATTCCATGTTTAGTGATAATGGAATTTCACAGATTGACATGATTGCTCTCTCAG
CGGCCCATACATTGGGCTTTTCTCATTGTGACCAGTTC
TCAAATCGTCTTTACAACTTCAGCACATCAAATAAAGTGGATCCAACACTTAACAAGACTTATGCAGCCCAATTAATGTTGCAATGCCCACAGAAAGTGGATCCTGAAGTAGCCATCGAT
ATGGATCCAAGTACTCCACAGGAGTTTGATAATGTGTACTTCACGAATCTACAACAAGGCATGGGCCTTTTTACTTCGGACCAAGTTCTTTTCACAGATGATAGATCCAAGCCCACTATT
GATACTTGGGCTAGTGATACTACTGCTTTCGAAAAAGCATTTGTGACTGCTATGACCAATTTGGGTCGTGTTGGGGTTAAGACTGGATCACAAGGGAACATTCGAAGTGATTGCTCAGTT
TTCAACTAG

Retrieve as FASTA