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Entry information : CclPrx09 (clementine0.9_009253m)
Entry ID 8659
Creation 2011-06-25 (Qiang Li)
Last sequence changes 2012-01-03 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: CclPrx09 (clementine0.9_009253m)
Name (synonym) CclPrx09 (clementine0.9_009253m)
Class Class III peroxidase    [Orthogroup: Prx022]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus clementina    [TaxId: 85681 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CclPrx09
start..stop		 S start..stop
CsPrx02 599 0 1..293 1..293
CsPrx02 195 3.52e-58 371..464 286..379
MePrx84 477 1.96e-167 2..464 11..421
RcPrx65 461 2.49e-161 59..462 26..400
LePrx106 437 4.91e-152 3..462 5..413
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8659' 'join(1256720..1257088,1257610..1257798,1257894..1258059,1259707..1260377)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1256720..1257088 367 N° 2 1257610..1257798 187 N° 3 1257894..1258059 164 N° 4 1259707..1260377 669
join(1256720..1257088,1257610..1257798,1257894..1258059,1259707..1260377)


exon

Literature and cross-references CclPrx09 (clementine0.9_009253m)
DNA ref. Phytozome 12:   scaffold_33 (1256720..1260377)
Protein sequence: CclPrx09 (clementine0.9_009253m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   464 (441)
PWM (Da):   %s   49903.61 (47193.2)  
PI (pH):   %s   4.75 (4.58) Peptide Signal:   %s   cut: 24 range:24-464
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MMRRVSFLVFLLCIVISFKNQNADTKKGLNITTTSTTSRSFSYEY
AASDPSAFQVVAGALFLSDDGKLEEGGEPYRSMEYDFYRDSCPQAEGTIRAMVRYLHKSRSDVAPALLRLVFHDC
FIEGCDASILLDDAEGVDSEKKSPPNESLKGYDVINIIKEELEEICPGVVSCADILALAAREGVVLAGGPFYPLYTGRKDSRLAFADIATLELPSPNADLSETLASFASRGFDLRETVTL
LGAHSIGVIHCKFFNNRLHNFGRSNEPDPSLDPDFLNLLRSKCRNISSTSPTPSPPFADSPSSSAAPSADFDGSVSSSSAPSPNFDGSFSSSAAPSPNFNGSPKSTTALSPAFDASPSSP
TASIFSLEALLASTFDEPGINVTYDGHQGGFGTVYYRSLLQNRGVLYADQQLMAGEETGIWVRAYASDVSLFRRDFALAMMKLSNLRVLTGPMGQIRLNCSKGA

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from phytozome (Major prob of prediction: 100 extra aa after VALS, 1 3'EST confirmed this extra seq, but all other EST stop just after the VALS!!!!!)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATGCGAAGGGTGAGCTTCCTCGTGTTCCTTCTGTGCATCGTGATCTCTTTCAAGAACCAAAACGCCGATACCAAGAAAGGCTTAAACATCACCACTACGAGCACTACCTCGCGTTCT
TTTTCTTATGAGTATGCGGCGTCGGATCCTTCTGCGTTTCAGGTAGTGGCTGGGGCCCTGTTCTTGTCCGATGACGGGAAACTTGAAGAAGGTGGCGAGCCTTACCGTTCTATGGAGTAC
GATTTTTACCGCGATTCTTGCCCGCAAGCCGAGGGTACTATTCGGGCTATGGTCCGGTATCTCCACAAATCCCGCTCCGATGTCGCCCCCGCTTTGTTGCGCCTCGTTTTCCATGATTGC
TTCATTGAGAGGTCCAGTTTTCTTCAATCAATTCTTGTTGTGTTTTTTATTGGTTTTAGTGCTAAGCGTTTCATTTCTTGTTGGATATCAACCTAATCGGATGTTGATTTTGATGTGAAT
TTATTATATCTTGATACTTGATCTTTACTATAATGTTGGTGAATATCTCATCGGACGTCGAGTTTGATCAGTGTTTGGTTATTTGATTTTGATGTGAATTTGTTGAACCTTGGATATTTA
ATCTGGGTTTTGTTGAATTTTGTAGTTCGTTTGCTTCTTGTTATTTTCCATATAATTTACTAGCTCTTTGCTAGTTGGATCTGGGTCATTGATTACTTAGTTTCATCCACTGTTATACAA
TCTCCAAACAATCTAGTTTATTCTGATAATCTTTCAGTAGGGTTATCTGATTTATTCACAGTTTGATCTGGGTTTAGCAATTATCTAATGCGTATTTTTGTTGATTGGGTTGTTCTTACG
TCAGTCTGATTGATTTTGAGTTGAATTTCTCTGTAATTTGGAAATTGATTAGGGTTGTGATGCTTCAATTCTACTGGATGATGCTGAAGGAGTGGACTCGGAGAAAAAGTCTCCACCCAA
TGAATCTCTCAAGGGCTACGATGTAATCAACATAATCAAGGAGGAGCTTGAAGAAATATGCCCTGGTGTGGTTTCATGTGCAGATATTCTTGCTTTGGCTGCCAGAGAAGGCGTTGTTCT
GTGGTAAATTCCTGTCTCATGTGACTACTCAAACTTTATTAAATCAGGCTCTACCTTTATATAATTTGTTTAGATAATCATTTTGTCCATGAATTTAGGCTGGTGGTCCATTCTATCCAC
TGTATACTGGAAGGAAGGACAGTAGGCTTGCTTTCGCGGATATAGCAACACTTGAGCTTCCTTCACCCAATGCTGATCTGTCCGAAACCCTTGCATCTTTTGCATCAAGGGGGTTTGATT
TAAGAGAAACTGTTACTCTATTGGGGGTATAGATTTCCTTATTTCATTTCATTTCCCTTTTTCCTTTCATGAAAAAGTAGAAATTTCTGATTTCAGTTTGTATTGAATTTACTCTTGAAT
TTTTTTTTTTTTTTTTGGTTATTTCTGCGTTTGAGCTGATTGTCTGATAGTCTTGTTCTGATCTCTTTTGTTCATAATTTGATGTACTAGAGAGGACAATATTTCCACCTAATTCTACAG
TTTAGCTTAGTAGAGGTGTCTTATTTTCCTTCTCATTTGTACTACCTTTTATTTCCTATTCCTTGGTACTCAAATTAGAATATTCTTATCATTATCAATCCTTCATTATGTTATGATACG
GATGGTAATACCTTACTAGGGATGGCAATNNNNNNNNNNNNNNNNNNNNCCAATCTCCCCATACCCATCCCCGATGTTTTGCATATGTCCCCGTCCCCTCCCCGTCCCCGTCAAAATTGC
TTGAGAGAATCTCCATCCCCTCCCCGAATAATAACAGGGGATCCCCGAGGGTCCCCGGTCCCCGAATAATTAATAGTCTAATACATTTTTTATTTTCGATTTTAAATTAATCATATNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTGCAACAACTGCACAATCTCCATTGTTTACATAATCATTAAAACCTGTCATCCATTTGGTTGCTTTCTTATAAGAATCCC
CTGTAGATCTAGTAGAAGAACTACTACCAGTATAATCAAAGCAATAAACAGTTGGTGAAAACTTCAATTAATACTCTTCAACTAATTCCCGGCAAAGGGTGACCACTTTCCCAACATACA
ACTATTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGAAATGGGTAGGGGATGGGGAT
TCCACCTCATCCCCGTCCCCTCCCCGAATAAAAAGTTGGGTAAAAAATTTTCCCCGTCCCCTCCCCGAAAAAAAAATTGGGTATAAAATTATCCCCGTACCCTCCCCGAATGGGGAAAAT
CCCCGAGGGTACCCATCCCCGTGGGGATTTTTGCCATCCCTATACCTTACACCTAGTATGATGACTTTTCTCTTAGAATGTATTGATTGGTCCTTGATTGGTGATTTTGTACTACAGATT
ATTCCTTTCTACCTAACAGTTTGTGCTTGTGATAACCTGATCCGAGTATTTAATTTCATAAATATTCAAGGAAATTTGTTCAGAGATTTCTTAGATTCCTAACCTTGTTATGGTTCAGTT
TTATGATGATAACCAGTTTTGATCTGTGATTGTGGTCGTTTCCAGCCTCCTAGCTGTTTAACTGTCTATTCTAAGTAATGTAATTTGATTATTTCTTCTTTCTTTGTTTGCAGGTGCCCA
TAGCATTGGTGTTATCCACTGCAAATTCTTCAACAATCGTCTGCATAACTTCGGCCGGAGTAATGAACCTGACCCATCTCTGGATCCTGATTTTCTGAACCTACTGAGATCAAAATGCAG
AAACATTTCATCAACATCGCCAACACCCTCACCTCCCTTTGCTGACTCCCCATCATCATCGGCAGCTCCATCAGCTGACTTTGATGGCTCAGTTTCTTCTTCATCAGCTCCCTCACCTAA
CTTCGATGGCTCATTTTCCTCATCAGCAGCTCCATCACCAAACTTCAATGGCTCACCAAAATCAACAACAGCTTTATCACCTGCCTTTGATGCCTCACCCTCATCACCCACAGCATCAAT
ATTTTCGTTGGAGGCCTTGTTAGCTTCAACATTTGACGAACCTGGAATAAATGTGACTTATGATGGACATCAAGGAGGTTTCGGCACTGTGTACTATCGCAGTCTTTTGCAGAATAGAGG
AGTTCTCTATGCTGATCAGCAGCTTATGGCCGGCGAAGAAACTGGGATCTGGGTGAGAGCATATGCTTCAGATGTCTCCTTGTTTCGCAGAGACTTTGCCTTGGCCATGATGAAGCTCTC
AAATCTCCGAGTCTTGACAGGACCAATGGGCCAGATCCGTCTTAATTGTTCAAAAGGGGCATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATGCGAAGGGTGAGCTTCCTCGTGTTCCTTCTGTGCATCGTGATCTCTTTCAAGAACCAAAACGCCGATACCAAGAAAGGCTTAAACATCACCACTACGAGCACTACCTCGCGTTCT
TTTTCTTATGAGTATGCGGCGTCGGATCCTTCTGCGTTTCAGGTAGTGGCTGGGGCCCTGTTCTTGTCCGATGACGGGAAACTTGAAGAAGGTGGCGAGCCTTACCGTTCTATGGAGTAC
GATTTTTACCGCGATTCTTGCCCGCAAGCCGAGGGTACTATTCGGGCTATGGTCCGGTATCTCCACAAATCCCGCTCCGATGTCGCCCCCGCTTTGTTGCGCCTCGTTTTCCATGATTGC
TTCATTGAGGGTTGTGATGCTTCAATTCTACTGGATGATGCTGAAGGAGTGGACTCGGAGAAAAAGTCTCCACCCAATGAATCTCTCAAGGGCTACGATGTAATCAACATAATCAAGGAG
GAGCTTGAAGAAATATGCCCTGGTGTGGTTTCATGTGCAGATATTCTTGCTTTGGCTGCCAGAGAAGGCGTTGTTCTGGCTGGTGGTCCATTCTATCCACTGTATACTGGAAGGAAGGAC
AGTAGGCTTGCTTTCGCGGATATAGCAACACTTGAGCTTCCTTCACCCAATGCTGATCTGTCCGAAACCCTTGCATCTTTTGCATCAAGGGGGTTTGATTTAAGAGAAACTGTTACTCTA
TTGGGTGCCCATAGCATTGGTGTTATCCACTGCAAATTCTTCAACAATCGTCTGCATAACTTCGGCCGGAGTAATGAACCTGACCCATCTCTGGATCCTGATTTTCTGAACCTACTGAGA
TCAAAATGCAGAAACATTTCATCAACATCGCCAACACCCTCACCTCCCTTTGCTGACTCCCCATCATCATCGGCAGCTCCATCAGCTGACTTTGATGGCTCAGTTTCTTCTTCATCAGCT
CCCTCACCTAACTTCGATGGCTCATTTTCCTCATCAGCAGCTCCATCACCAAACTTCAATGGCTCACCAAAATCAACAACAGCTTTATCACCTGCCTTTGATGCCTCACCCTCATCACCC
ACAGCATCAATATTTTCGTTGGAGGCCTTGTTAGCTTCAACATTTGACGAACCTGGAATAAATGTGACTTATGATGGACATCAAGGAGGTTTCGGCACTGTGTACTATCGCAGTCTTTTG
CAGAATAGAGGAGTTCTCTATGCTGATCAGCAGCTTATGGCCGGCGAAGAAACTGGGATCTGGGTGAGAGCATATGCTTCAGATGTCTCCTTGTTTCGCAGAGACTTTGCCTTGGCCATG
ATGAAGCTCTCAAATCTCCGAGTCTTGACAGGACCAATGGGCCAGATCCGTCTTAATTGTTCAAAAGGGGCATAA

Retrieve as FASTA