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Entry information : SbPrx39 (Sobic.002G391700.1 [2.1] / SB02G040710 [1.4])
Entry ID 866
Creation 2010-01-11 (Christophe Dunand)
Last sequence changes 2010-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Messaoudi
Last annotation changes 2014-08-04 (Messaoudi)
Peroxidase information: SbPrx39 (Sobic.002G391700.1 [2.1] / SB02G040710 [1.4])
Name (synonym) SbPrx39 (Sobic.002G391700.1 [2.1] / SB02G040710 [1.4])
Class Class III peroxidase    [Orthogroup: Prx255]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum bicolor    [TaxId: 4558 ]
Cellular localisation N/D
Tissue type Callus
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SbPrx39
start..stop		 S start..stop
SiPrx142 433 2.58e-153 42..368 1..320
TaPrx61-2A 337 6.56e-115 1..364 1..345
TaPrx61-1A 336 1.41e-114 1..364 1..345
TaPrx100-1A 332 8.52e-113 1..368 1..363
Gene structure Fichier Exons►


exon

Literature and cross-references SbPrx39 (Sobic.002G391700.1 [2.1] / SB02G040710 [1.4])
Literature Cordonnier-Pratt, M.-M. et al., unpublished.
DNA ref. Phytozome 12:   chromosome_2 (74612795..74611689)
Protein sequence: SbPrx39 (Sobic.002G391700.1 [2.1] / SB02G040710 [1.4])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   368 (346)
PWM (Da):   %s   38314.1 (36171.9) Transmb domain:   %s   i7-29o
PI (pH):   %s   5.03 (4.89) Peptide Signal:   %s   cut: 23 range:23-368
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDAKLAALIA LLALLGPVAC HGATVICLGG WVRPVPSLLG GLVCPGNLLP NPSLNPIPAP SSSVLKVGYY NNSSNSNACP NAEDIVRKVV EDAVSKDPGT GAGLIRLFFH DCFVRGCDAS  VLLRNTSGGS TSEQTEMFGL PNVNSLRGFE VIDAAKAALE SACPGVVSCA DTLAFAARDA SSVLSGGRIS SAFAMPAGRL DGRVSLANET TDNLPGPFCD LDALTNFFAA KGLDRDDMVT  LSGAHTIGQA RCAFVSNRTD MNATLAKDLR RDKCRSGGNT KVALDYKTPD TMDVQYYQNV NDDDVVLDSD AALSSPATKP LVDTYAAGSS LSLWETKFAA AMVKMGSIEV KTSPGADAEI 
RKKCSIYN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, no intron). No EST.
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