Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
297 |
PWM (Da): |
32844.54 |
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PI (pH):
| 5.4 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MRIVISFPISFENRNADTKKALNINSTSNFLHYVCYEYPASDPSLFRIAAGAGALFLSNGGKIEEGDCGEPYDSLQYDFNRDWCLQAEGRIRAMVWYLRKSRSGVAPAFLRLVFRDCSIEGCDSSVLLDEADGVDSEKMSLPSESLNRFYVINIIKEDLEEIFPGVVSYSDTLALAAREGVVLAGGPFYPLHTGRRDSRLALADIATFELPLPNADLPETLASFASRGFDLRETVTFLDAHGIGVIHCIFFKSHLCNFGRINESLDPGFLNLLRSKCRNVHSGSAVLVNCRLRTQIL |
Retrieve as FASTA
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Remarks |
Partial sequence from genomic. Incorrect prediction from phytozome (Start M and long 3' end are missing). 5'end completed with ESTs. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCGAATAGTGATCAGCTTCCCGATCTCTTTCGAGAACCGAAACGCCGATACCAAGAAAGCCTTGAACATCAACTCCACCAGTAATTTCTTGCATTATGTTTGTTACGAGTATCCAGCG TCGGATCCTTCTCTCTTTCGGATAGCCGCCGGCGCTGGGGCCCTGTTCTTGTCCAATGGCGGGAAAATTGAAGAAGGCGACTGTGGCGAGCCTTATGATTCTTTGCAGTACGATTTCAAC CGCGATTGGTGCCTACAAGCTGAGGGCCGTATTCGGGCCATGGTTTGGTATCTCCGAAAATCACGCTCCGGTGTAGCTCCTGCTTTCTTGCGCCTCGTTTTCCGGGATTGCTCCATTGAG GTCCATTTTTATTCAGTCAACTTCAGTCAAATATTATTTTGTGTGTGTGTGGGTGTGTTTTTTTTTTTTAATATTCTGAGTTTTGTTAAATCTTGAATTTCTTTTTACTTCTTGCTATTT CTAGTTATTTCATCCACTGATATACTCTCCAAACAATCTTGTTTATTCCGCTAATTTTTCACTAGGGTTATCTGATTTATTCACATTTTGATCTGGGTTAAGCAATTATTTTATGTGTAA TTTTGTTAATTGGGTTCTTGCTATTTCAATCAGATTAATTTTGAGTTGAGTTTTCTGTAATTTGGAACTTGTTTAGGGTTGTGATTCTTCAGTTCTACTGGATGAAGCTGATGGAGTAGA CTCAGAGAAAATGTCTCTTCCCAGTGAATCTCTCAATCGTTTCTATGTAATCAATATAATCAAAGAGGATCTCGAAGAAATTTTCCCTGGTGTGGTTTCTTATTCGGATACTCTTGCTTT GGCTGCCAGAGAAGGTGTTGTTCTGGTAAATTCCTGTATCATGTGACCATCCAAGTCTATGAAATCTGGCTTTCTATCTATGTTTGTACATTCTGTATAGATAATCATTGTGTCTTTGAA TTTAGGCTGGTGGTCCATTCTATCCACTGCATACTGGCAGGAGAGACAGCAGGCTTGCTCTTGCAGATATAGCAACATTTGAGCTTCCTTTACCCAATGCTGATCTGCCTGAAACCCTTG CATCTTTTGCATCAAGGGGGTTTGATTTAAGAGAAACTGTTACATTTTTGGGTAGAGAGAAATCCTTATTTCATTTCACGTTCCTTTTTATTTTCATGGAAAAGAGAAATTTCTGATTTT GGTTTGTATTTAATTGCTGCTGCAACTTTTTGCAATTTCCCCGTTCCAGCTGATTGTCTGATAGTTTAGTTCTGATCTCTTTGGTTCAAAATTTGATACTTGAGCTTAGGAGATTTCTTA AGATTTCTAACTTTGTTATGGTTCAGTTTTGTGATAATAACAAGTACTGTTAGTCTGTGATTTTGTTCCCAGATGCTCATGGCATTGGAGTCATCCACTGCATATTCTTCAAGAGTCATC TCTGTAACTTTGGGAGGATTAATGAATCTCTGGATCCCGGTTTTTTGAATCTGTTGAGATCAAAATGCAGAAACGTGCATTCAGGGAGTGCTGTTCTGGTAAATTGCAGACTACGTACCC AAATTTTATAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCGAATAGTGATCAGCTTCCCGATCTCTTTCGAGAACCGAAACGCCGATACCAAGAAAGCCTTGAACATCAACTCCACCAGTAATTTCTTGCATTATGTTTGTTACGAGTATCCAGCG TCGGATCCTTCTCTCTTTCGGATAGCCGCCGGCGCTGGGGCCCTGTTCTTGTCCAATGGCGGGAAAATTGAAGAAGGCGACTGTGGCGAGCCTTATGATTCTTTGCAGTACGATTTCAAC CGCGATTGGTGCCTACAAGCTGAGGGCCGTATTCGGGCCATGGTTTGGTATCTCCGAAAATCACGCTCCGGTGTAGCTCCTGCTTTCTTGCGCCTCGTTTTCCGGGATTGCTCCATTGAG GGTTGTGATTCTTCAGTTCTACTGGATGAAGCTGATGGAGTAGACTCAGAGAAAATGTCTCTTCCCAGTGAATCTCTCAATCGTTTCTATGTAATCAATATAATCAAAGAGGATCTCGAA GAAATTTTCCCTGGTGTGGTTTCTTATTCGGATACTCTTGCTTTGGCTGCCAGAGAAGGTGTTGTTCTGGCTGGTGGTCCATTCTATCCACTGCATACTGGCAGGAGAGACAGCAGGCTT GCTCTTGCAGATATAGCAACATTTGAGCTTCCTTTACCCAATGCTGATCTGCCTGAAACCCTTGCATCTTTTGCATCAAGGGGGTTTGATTTAAGAGAAACTGTTACATTTTTGGATGCT CATGGCATTGGAGTCATCCACTGCATATTCTTCAAGAGTCATCTCTGTAACTTTGGGAGGATTAATGAATCTCTGGATCCCGGTTTTTTGAATCTGTTGAGATCAAAATGCAGAAACGTG CATTCAGGGAGTGCTGTTCTGGTAAATTGCAGACTACGTACCCAAATTTTATAA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CTTTCAGGAA AAAAAAAATT CTGAAACCCC ACACCAAAAA GCTCACAAAC AGAAATCTCC CCCAAAAAGC AAACAAAACA AGAAAAAGAA ATGCCGTATC AATCTTGGAA CTAGCAACAA
TGCGAATAGT GATCAGCTTC CCGATCTCTT TCGAGAACCG AAACGCCGAT ACCAAGAAAG CCTTGAACAT CAACTCCACC AGTAATTTCT TGCATTATGT TTGTTACGAG TATCCAGCGT
CGGATCCTTC TCTCTTTCGG ATAGCCGCCG GCGCTGGGGC CCTGTTCTTG TCCAATGGCG GGAAAATTGA AGAAGGCGAC TGTGGCGAGC CTTATGATTC TTTGCAGTAC GATTTCAACC
GCGATTGGTG CCTACAAGCT GAGGGCCGTA TTCGGGCCAT GGTTTGGTAT CTCCGAAAAT CACGCTCCGG TGTAGCTCCT GCTTTCTTGC GCCTCGTTTT CCGGGATTGC TCCATTGAGG
GTTGTGATTC TTCAGTTCTA CTGGATGAAG CTGATGGAGT AGACTCAGAG AAAATGTCTC TTCCCAGTGA ATCTCTCAAT CGTTTCTATG TAATCAATAT AATCAAAGAG GATCTCGAAG
AAATTTTCCC TGGTGTGGTT TCTTATTCGG ATACTCTTGC TTTGGCTGCC AGAGAAGGTG TTGTTCTGGC TGGTGGTCCA TTCTATCCAC TGCATACTGG CAGGAGAGAC AGCAGGCTTG
CTCTTGCAGA TATAGCAACA TTTGAGCTTC CTTTACCCAA TGCTGATCTG CCTGAAACCC TTGCATCTTT TGCATCAAGG GGGTTTGATT TAAGAGAAAC TGTTACATTT TTGGATGCTC
ATGGCATTGG AGTCATCCAC TGCATATTCT TCAAGAGTCA TCTCTGTAAC TTTGGGAGGA TTAATGAATC TCTGGATCCC GGTTTTTTGA ATCTGTTGAG ATCAAAATGC AGAAACGTGC
ATTCAGGGAG TGCTGTTCTG GTAAATTGCA GACTACGTAC CCAAATTTTA TAA
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Retrieve as FASTA
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