Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
406 (385) |
PWM (Da): |
43548.12 (41301.8) |
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PI (pH):
| 9.21 (9.23) |
Peptide Signal:
| cut: 22 range:22-406 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MAVLPISVIF LAFISIPYSI ANPNSPNASP KPSPVASPKP SPRASPKPSP VASPKPSPLA SPKPSPVASP KPSPLASPKP SPAASPNPRP LASPMPSAKP ALRADYYKAT CPDFEKIVRE
FVHQKQTQSP STAAGALRVF MHDCFVDGCD GSVLISSNAF NVAERDSDIN LSLPGDAFDV VIKIKNALED ACPGVVSCAD ILTASTRNLV VMAGGPRFNV SFGRKDGLVS QAARIPGNLP
TNNMTMDEIL KMFASKGFSI QEYVALMGAH TIGFAHCKEF SDRLFKFAPN QPTDPELNPK YAEALKAACK NHEQNITMTA FNDVMSPGKF DNSYFRGLPR GLGLLRVDNM LVKDPRTKPL
VDQYASNEVK FFADFAAAME KLSLLEVKTD PKDGNVRRRC DAFNDA
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic and 10 ESTs. Very long PS confirmed with ESTs. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCCGTGC TTCCTATCTC CGTTATCTTC CTTGCATTTA TCTCCATTCC CTACTCCATT GCCAATCCTA ATTCTCCCAA TGCCAGTCCC AAACCGAGTC CTGTAGCTAG TCCTAAGCCA
AGCCCTCGTG CTAGTCCCAA ACCAAGTCCT GTAGCTAGTC CTAAGCCAAG TCCTCTTGCT AGTCCCAAAC CAAGTCCTGT AGCTAGTCCT AAGCCAAGTC CTCTCGCTAG TCCGAAACCA
AGTCCTGCAG CTAGTCCTAA CCCAAGGCCC CTCGCTAGTC CCATGCCTTC TGCTAAGCCG GCCCTCCGCG CGGACTACTA TAAGGCGACA TGCCCAGACT TTGAAAAAAT CGTCCGTGAG
TTCGTGCACC AGAAGCAAAC ACAGAGCCCC AGCACAGCTG CGGGTGCCCT CCGGGTTTTC ATGCACGACT GCTTTGTGGA CGGGTGCGAT GGGTCCGTCC TCATCTCGTC GAATGCATTC
AACGTGGCGG AGCGTGACAG TGACATCAAT CTTTCCCTAC CCGGCGACGC ATTTGATGTT GTCATCAAGA TAAAGAATGC CCTTGAGGAT GCCTGCCCTG GCGTGGTGTC ATGCGCTGAC
ATCTTAACCG CCTCCACTCG TAACCTGGTT GTTATGGCAG GGGGACCTCG TTTCAATGTG TCATTCGGCC GCAAGGATGG GCTTGTCTCT CAAGCGGCCA GGATCCCAGG GAATTTACCA
ACCAATAACA TGACAATGGA CGAAATTCTC AAAATGTTTG CAAGCAAGGG ATTCTCCATT CAGGAATATG TTGCATTGAT GGGTGCCCAC ACCATAGGTT TCGCTCACTG CAAGGAGTTT
TCTGACAGGC TCTTTAAATT CGCCCCGAAT CAGCCAACAG ACCCTGAATT GAACCCAAAG TATGCCGAGG CTTTGAAAGC CGCCTGCAAA AATCACGAAC AAAACATCAC GATGACTGCT
TTCAACGATG TGATGTCACC TGGCAAGTTT GATAACTCTT ATTTCAGGGG TTTGCCCAGA GGCTTGGGGC TGTTGAGAGT AGATAATATG CTGGTCAAGG ATCCTAGGAC CAAGCCCCTG
GTGGATCAGT ATGCTAGCAA TGAGGTTAAA TTCTTCGCTG ATTTTGCTGC TGCTATGGAG AAACTTAGTC TTCTTGAAGT CAAGACTGAT CCCAAGGATG GAAACGTCAG ACGCCGCTGC
GATGCTTTCA ATGATGCTTA A
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCCGTGC TTCCTATCTC CGTTATCTTC CTTGCATTTA TCTCCATTCC CTACTCCATT GCCAATCCTA ATTCTCCCAA TGCCAGTCCC AAACCGAGTC CTGTAGCTAG TCCTAAGCCA
AGCCCTCGTG CTAGTCCCAA ACCAAGTCCT GTAGCTAGTC CTAAGCCAAG TCCTCTTGCT AGTCCCAAAC CAAGTCCTGT AGCTAGTCCT AAGCCAAGTC CTCTCGCTAG TCCGAAACCA
AGTCCTGCAG CTAGTCCTAA CCCAAGGCCC CTCGCTAGTC CCATGCCTTC TGCTAAGCCG GCCCTCCGCG CGGACTACTA TAAGGCGACA TGCCCAGACT TTGAAAAAAT CGTCCGTGAG
TTCGTGCACC AGAAGCAAAC ACAGAGCCCC AGCACAGCTG CGGGTGCCCT CCGGGTTTTC ATGCACGACT GCTTTGTGGA CGGGTGCGAT GGGTCCGTCC TCATCTCGTC GAATGCATTC
AACGTGGCGG AGCGTGACAG TGACATCAAT CTTTCCCTAC CCGGCGACGC ATTTGATGTT GTCATCAAGA TAAAGAATGC CCTTGAGGAT GCCTGCCCTG GCGTGGTGTC ATGCGCTGAC
ATCTTAACCG CCTCCACTCG TAACCTGGTT GTTATGGCAG GGGGACCTCG TTTCAATGTG TCATTCGGCC GCAAGGATGG GCTTGTCTCT CAAGCGGCCA GGATCCCAGG GAATTTACCA
ACCAATAACA TGACAATGGA CGAAATTCTC AAAATGTTTG CAAGCAAGGG ATTCTCCATT CAGGAATATG TTGCATTGAT GGGTGCCCAC ACCATAGGTT TCGCTCACTG CAAGGAGTTT
TCTGACAGGC TCTTTAAATT CGCCCCGAAT CAGCCAACAG ACCCTGAATT GAACCCAAAG TATGCCGAGG CTTTGAAAGC CGCCTGCAAA AATCACGAAC AAAACATCAC GATGACTGCT
TTCAACGATG TGATGTCACC TGGCAAGTTT GATAACTCTT ATTTCAGGGG TTTGCCCAGA GGCTTGGGGC TGTTGAGAGT AGATAATATG CTGGTCAAGG ATCCTAGGAC CAAGCCCCTG
GTGGATCAGT ATGCTAGCAA TGAGGTTAAA TTCTTCGCTG ATTTTGCTGC TGCTATGGAG AAACTTAGTC TTCTTGAAGT CAAGACTGAT CCCAAGGATG GAAACGTCAG ACGCCGCTGC
GATGCTTTCA ATGATGCTTA A
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Retrieve as FASTA
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