View Redoxidase 8682

Entry information : CclPrx16 (clementine0.9_014487m)

Entry ID	8682
Creation	2011-06-25 (Qiang Li)
Last sequence changes	2011-10-03 (Qiang Li)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2012-01-04 (Qiang LI)

Peroxidase information: CclPrx16 (clementine0.9_014487m)

Name (synonym)

CclPrx16 (clementine0.9_014487m)

Class

Class III peroxidase [Orthogroup: Prx100]

Taxonomy

Eukaryota Viridiplantae Streptophyta Rutaceae Citrus

Organism

Citrus clementina [TaxId: 85681 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	CclPrx16 start..stop	S start..stop
CsPrx56	707	0	1..350	1..350
CclPrx68	620	0	1..350	1..349
CclPrx05	614	0	1..350	1..350
CsPrx54	613	0	1..350	1..349

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8682' 'complement(join(1057340..1057812,1058021..1058189,1059049..1059240,1059949..1060167))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1059949..1060167	217	N° 2	1059049..1059240	190	N° 3	1058021..1058189	167	N° 4	1057340..1057812	471
complement(join(1057340..1057812,1058021..1058189,1059049..1059240,1059949..1060 167))

Literature and cross-references CclPrx16 (clementine0.9_014487m)

DNA ref.	Phytozome 12: scaffold_31 (1060167..1057340)

Protein sequence: CclPrx16 (clementine0.9_014487m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	350 (324)
PWM (Da):	37981.25 (35383.8)
PI (pH):	8.58 (8.59)	Peptide Signal:	cut: 27 range:27-350

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MATLRYLLAAALVVAIALEGSSPSQAQLSPFFYSSTCPNVTNIIR
GVLQKAFLSDIRIGASLIRLHFHDCFVNGCDASVLLDNTTTIDSEKFAAPNNNSARGFEVIDQMKAAVEKACPRVVSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANQNLPSPFDTLDRLKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQGGNGSVLTNLDVTTPNVFDNKYFSNLRNRKGLLQSDQELFSTPGADTIDIVNVFRKNQAAFFKSFVTSMIRMGNLK
PLTGNEGEIRLNCRRVNGNSNIVTRSSSSEGDTISSF

Retrieve as FASTA

Remarks

Complete sequence from genomic.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCACTCTGCGTTATCTTCTTGCAGCTGCTCTTGTAGTTGCTATTGCTCTTGAGGGATCATCACCATCTCAAGCTCAACTGTCTCCCTTTTTTTATTCTTCCACATGCCCTAATGTA
ACCAACATAATTCGAGGGGTGCTTCAGAAAGCTTTCTTGTCCGATATTCGTATCGGTGCCAGCCTTATCAGGCTTCATTTCCATGACTGTTTTGTTAATGTATCAATCTCTAATCTTTGT
TTTTTTCTTCTATTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTTTAGTGGCTTTAAACAAAATATAGTTTTACTTAAAACCTAAAGAACA
GTTTGAATATGTCATTTTTAAAAATCCAAAACCCTTTTTATATATCTTTTGTTTTAATTGCTTTTACTTGTATGCTGCTTGTGCATCCTTGTTCTGCCCGCATATTCATAAATTTAAAGA
GACTTTTTCCCCCTAAAAGATCTGATTTTTTCAATTCATAGGACGATTTTTTCCTTTCTAATTTCGATGCACCGAAGGCCGTGTAATTTTTCAAAAAGACACTTATATATGTGATTTTCA
TACATTAGAAATTAAAATCAAATAAAGACTTAGCCTAAATCAAGGATTAAAATCCTCTAGTGATCTATTTCTTGTTGAGTGCTTTTGATGATGCCTTGAGTCTATTATTAATATAGTTTA
AAATTTAACTACTCCAACTGAAAAGCTTAAGTCGGGAGTAAATCCTAGTCTTGAAAACATATTTGACGATAAGACAATTACAATAAGAAGAGTTTGCGTTACTTTTTATTTATTTGTCAT
GAGATAAGAAGGAATCCATCAACTTATTAAATTAACGATACAACGACACTTAACATGACAAATTATTAATTAACAATATCATTTCAGGGGGCTGTGATGCATCAGTTTTGTTGGACAACA
CTACAACCATAGACAGTGAGAAATTTGCTGCGCCAAATAATAATTCGGCGAGGGGTTTTGAAGTTATTGATCAGATGAAAGCTGCCGTTGAAAAGGCCTGTCCAAGGGTTGTTTCCTGTG
CTGATATTCTTACTATTGCAGCTGAACAATCTGTTGCTTTGGTACGAATTTTTATTAACAACTCCACTTCTTTAATAATAAAATAATTAGGGTAATTATCCATCAACCACTTGTTCNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGAATTCTATTCGAATTATATTATTTTGCACATATACACTTCCGTCTCCAAATTGTTAAGAGAACTCATGGAATATTGTATAAATGAC
TTTTTATCCCCAAATGTAAAATAACAATTATTCATCGACTACTTTTTTTTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGAACTCTACTTAAAGTTATATT
ATTTTGCACGTCCACTTTTGTTTTTTCGTCGTGAAATGATAATTTTACCTTTATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGATACGTGGATAA
TTACTCAAAAAATAATTCTCACGGAAAAATGGAAAAATTTTGAATCCACGTTTTTATTCTTGCATTTTTGCATGTGCATTTCAACGAGAAAACTACAAAAGTCTAAGATGTCATTGTCCT
ACCACGTGGTAATTGATTTAAAAGTTGTGATGGGATTCGTCATGGAACCGATCACTTTTAAGATCCCATCGTTTTCAACTATGACGTTGGATTTCATTACACGACAAAGCTTGATCCAAA
ATTTTATGGCGACGTGATAAGACTACCACATTATTAGCCAAATGATCCGACCCAAACACACACAAATTGAAAGCCCGAAAGATTAATTGTCTATTTCTGATTTTGATAAAATTTGCTTAT
TATACATCTCTTAAGTTTATTGCTGATCGTGAGTAATGAACTGAATGGTTTTGGTTACAGTCTCAGGGGGTCCTTCGTGGACAAATCTATTGGGAAGAAGAGACAGCAGAACAGCAAACA
GAACTCTTGCAAATCAGAATCTTCCATCACCGTTTGATACTCTTGACAGGCTCAAAGCTAGTTTTAGAAATGTCGGCCTCAACGATAATTTTGATCTTGTTGCACTCTCCGGTAATTATT
TTGCTTCTCGCCCTTTAATTTTAAGTAAAGTTATGAGAGTAAATTTTTAGAGGTCCAGGATTCCACGTGGAGCGGTCATCTAAATAAAGGTGGTCATGCTACAGCAAATTATGTTATTAT
CACTAAGCGAATTATAATATTATTCCTTGTATGAATAGAGCAAGATTACAAGGATTTGCCGTGCATGTATAATTTTCAGGAGAGCTCACACATTTGGAAGGGCTCAGTGCCGATTTTTCA
GCGTAAGATTATTCAATTTCAACAACACTGGCAATCCAGACCCAACCCTAGACGCAACCTTCTTACAACAACTGAGGCAACTATGCCCACAAGGTGGAAACGGCAGCGTTCTAACAAATT
TAGACGTCACAACACCTAATGTTTTCGACAACAAATACTTCTCCAATCTCAGAAACCGCAAAGGCCTTCTGCAGAGTGATCAAGAGCTGTTTTCGACTCCCGGTGCCGATACCATTGACA
TTGTCAATGTCTTTCGCAAGAACCAGGCTGCTTTCTTTAAAAGCTTTGTGACTTCAATGATAAGAATGGGGAATTTGAAGCCACTGACGGGAAATGAAGGGGAGATTAGATTGAACTGCA
GGAGGGTCAATGGAAACAGCAATATCGTAACAAGATCATCATCGTCAGAGGGTGATACGATCAGCTCTTTCTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA