View Redoxidase 8687

Entry information : CclPrx23 (clementine0.9_014847m)

Entry ID	8687
Creation	2011-06-25 (Qiang Li)
Last sequence changes	2011-12-13 (Qiang Li)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-01-04 (Qiang LI)

Peroxidase information: CclPrx23 (clementine0.9_014847m)

Name (synonym)

CclPrx23 (clementine0.9_014847m)

Class

Class III peroxidase [Orthogroup: Prx005]

Taxonomy

Eukaryota Viridiplantae Streptophyta Rutaceae Citrus

Organism

Citrus clementina [TaxId: 85681 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	CclPrx23 start..stop	S start..stop
CsPrx25	706	0	1..343	1..343
PtPrx67	486	7.13e-174	1..342	1..350
NtPrx15-1A	466	4.64e-166	1..342	1..354
FvPrx01	464	1.71e-165	1..337	1..347

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8687' 'join(1595963..1596202,1597533..1597718,1598366..1598971)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1595963..1596202	238	N° 2	1597533..1597718	184	N° 3	1598366..1598971	604
join(1595963..1596202,1597533..1597718,1598366..1598971)

Literature and cross-references CclPrx23 (clementine0.9_014847m)

DNA ref.	Phytozome 12: scaffold_34 (1595963..1598971)

Protein sequence: CclPrx23 (clementine0.9_014847m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	343 (317)
PWM (Da):	37537.2 (34911.8)
PI (pH):	8.39 (8.56)	Peptide Signal:	cut: 27 range:27-343

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MATASASSFISLLLISSLLLASFTEAQKPPVAKGLSWTFYDQSCP
KLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVG
LAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCS
VKNSNNLASVVEDVVEEAWSGII*

Retrieve as FASTA

Remarks

Complete sequence from genomic.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCAACTGCTTCAGCTTCTTCTTTCATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGGCACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTAT
GACCAGAGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACGATTGCTTCGTTCAG
AGGTAAAAGAAAAAGAAAATGATACCTCAATTAAGCTGGTGCATCACTTATTTCATGGTGTTAATGTGTTTTTAATAAATGCCCTTTTATTTAAAATGGTGATCATCATTAGTTGATCAT
TTCTTGATTTGAAAAAAAAAAAAAAAAAGCCTAAGCACGTTTCTAACTCATGCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATGTCTCCTCTAACGAAATTGTCTAAA
AAAGAACACAAGAATTTTCAAGCTAAAGGTCATATTTCCCCTTTGGACAATTATCTAGCTTGTCCCCATACGTATTGTAAAATATGACCTAAAAGGTCTATATTCTTAATTTTGTAGCAG
TTGAATACTTGAATCTAAGTTTTTAAGGGTAAAAAATATTTGTGTCTGATATAAAGTAAAACCAAAACAAATTTGAGGATACGCAACACATGAAAAAGTAGAAAATAATTAATAAATAGG
AAAAAAAAAAGGAAAACCATGTCGTTTGACTAAATTGATTCAAATTTCCCTAATATTTTAAAACAGATCTAAACTCTCTTAACTTCTTTTTTTTTTTTTTTTCACTTATCTTATCATTTT
GACATTGGAGGTTATTTGGTGTTGGGAATATCAGTACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACAAAATTATTAGAAAAACCAAGAG
AATTGTCCTAGTTTTTCAATTAATTCTGAATTTTCCAGAATTAAATGCAACATAAACATATATATACTATTTTTTGGAGAATAATAATAAGAGGGTTGTGTGTGTATATATTGCATTAAA
TTATTCAATAAATTCGGAATTTTTTTTCAAAATTAACTAAAAAATTATAACAACTCCCCTACTGTTTCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNGATATTCATATTCTCAATATCAAATAACTATTAAGCTGAAGGTACAGTGGTAAGATCAGTAAAATTTGACACTCAAGGGGATTATTGGATGTATTTTTAAAA
CATCAGGAAGATTTTGATTAGTTTAATTAAATGACAATGAGTTCAACGCCTTTTTCGTTACTACATATATTATAACATGAATATTATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGG
TAGATTGCTCAAACCTAGAGACTAAAGGGGCCATAATTTTACAACTTTCTTTGGGTTTTTATAGGATGGTTGCCTTTTAAAAAGTCTTTTGTTTTGTTTTTGTTTTTTGACAAATTTAGT
GAAATTTTGCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAAATTTGTAGACGATCTTCGTGCT
CGTGTTCACAAGGAGTGTGGCAGAGTTGTTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTGGTATTTATCTTCATTTCTTCTTTCACTCTTTTTGCTTTTC
TAGTCTCAAATCAGGACTTTAACTAACGAGCAAAACAACGTTATTGTTTGATGTGACCCCTTTTTTAAAAGAAGAAAAATTTAGTCATTCATTTATACATCCCATAATATCTAATAAAAA
TGTCAAAGTTGTTAGATCCACCCAAGCCAGGAAAAAGGAGTCGGGTGGTCGGCCAATTAATTAATACCTATTTATGATTAAATGGTCATCTGCACTTATCCGATTATATAGATCCATATT
TAATAACAATTANNNNNNNNNNNNNNNNNNNNNAATTATTACAACAAATAATAATTTTAACATCGAAGCCAAGGTTTAGCTCCGCTTAGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCACGATACATGTAGAAAAATGTTAAAAAGACTAAAAGAGGGACCAAAAAAATTGATTAAATACTTAATTATTTTCTGTTTTTTCTCTGC
TATCNNNNNNNNNNNNNNNNNNNNNNNNNCTTATCATTTTGTCCCTTTTTTTTTTTTCCAAATTTGTGCTCCAAATATTAGCGCTCATAGACATAACATACGATCAATTCATTGGTGTTG
ATGGCAGTCTGGAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCTCAACGATTT
CCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAATCGCCTCTATCCCAAACAAGACCCCACACTGGA
CAAAACATTCGCCAACAATCTCAAAAAGACATGCCCCACTTCGGATTCCAACAACACCACCGTCTTCGACATCCGGTCCCCGAACGTGTTCGACAACAAGTACTACGTTGACTTGATGAA
CCGACAGGGGTTGCTGACGTCGGACCAGGATCTTTACACGGACAAGAGAACGAGGAGCATTGTCACGAGCTTTGCTGTGGACCAGTCACTCTTCTTTCAAGAGTTTGCCAATTCGATGAT
AAAGATGTCGCAGTTGAGTGTGCTCACGGGGAAGCAAGGAGAGATTAGAGCCAAGTGCTCCGTCAAGAATTCCAATAATTTGGCTTCTGTTGTTGAGGATGTAGTTGAAGAGGCTTGGTC
TGGGATTATCTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA