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Entry information : CclPrx40 (clementine0.9_015724m)
Entry ID 8697
Creation 2011-06-25 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: CclPrx40 (clementine0.9_015724m)
Name (synonym) CclPrx40 (clementine0.9_015724m)
Class Class III peroxidase    [Orthogroup: Prx007]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus clementina    [TaxId: 85681 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CclPrx40
start..stop		 S start..stop
CsPrx19 669 0 1..325 1..325
CppPrx13 654 0 4..325 1..322
NnPrx23 499 6.81e-180 1..325 1..326
MePrx24 498 9.02e-180 1..325 1..325
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8697' 'complement(join(1055352..1055764,1055880..1056042,1056143..1056334,1056434..1056643))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1056434..1056643 208 N° 2 1056143..1056334 190 N° 3 1055880..1056042 161 N° 4 1055352..1055764 411
complement(join(1055352..1055764,1055880..1056042,1056143..1056334,1056434..1056 643))


exon

Literature and cross-references CclPrx40 (clementine0.9_015724m)
DNA ref. Phytozome 12:   scaffold_79 (1056643..1055352)
Protein sequence: CclPrx40 (clementine0.9_015724m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325 (302)
PWM (Da):   %s   35529.25 (33106.0) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.9 (9.10) Peptide Signal:   %s   cut: 24 range:24-325
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGRIDYIGVVFLSLFGVVGLSEAQLQLGFYAKSCPRAEKIVLDYV
NKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGA
HTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVK
TGSEGEIRKRCAFVN

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAAGGATAGACTACATTGGTGTCGTATTTTTAAGTCTTTTTGGTGTTGTAGGCCTGAGTGAAGCTCAATTGCAACTGGGATTTTATGCTAAGAGCTGCCCAAGAGCTGAAAAGATT
GTGTTAGACTATGTTAACAAACACATCCACAATGCCCCCTCATTAGCCGCATCTTTCCTCAGAATGCATTTCCATGATTGCTTTGTCAGGGTTAGCACAATATTTCACCTTTTGGAAGCT
TTGCATAAAACTCTTATCTCCGTTTTACATTTTGTTTCTTGCTGACGCGCGCTTCGCTTTGCATCTCAGGGGGCTGTGATGCATCCGTGCTGCTAAACTCAACAGGCAATCCTGAAAGAA
ATGCCGTTCCAAATCAAACATTGACAGGCGCAACCTTTGATTTCATCGAAAGAGTGAAGAGACTAGTCGAAGATGCATGCCCCGGCATAGTTTCTTGTGCAGATATTCTTACGTTAGTTA
CAAGAGACTCTATTGTAGCCACAGTAAGCGTTGCATTTTCATTTTCTTCTTGAGACAAGATAATTAATTAACAAGACTACAGAGCTTCTGTTTCTGTCTAATTTTACTTGCTGTTGACTT
CAGGGGGAGGTCCTTCCTGGAAAGTTCCAACCGGACGAAGAGACGGGCGAGTCTCCATTCGTTCAGAAGCCCAAAACAATATCCCAGCTCCTACTAACAACTTCACCCTTCTTCAACGAA
GTTTTGCTAATCAAGGACTTGATTTGAAGGACCTGGTTCTGCTCTCAGGTAAGCACAACAACTAAAGTGTTTGGTAATTTTTATTTTTTTTCAATCTTTTAAGTCGTGGCACCGCAATTC
TAGATGGAACTAAGCTTGACATAAGGCTTTCATGTTGTTTCAGGTGTGCACACACAATCGGGGTCTCCCACTGCACTTCAGTTTCAAGCCGGCTGTACAATTTCACAGGAGTGGGTGACC
AAGACCCTGCTCTTGACAGTGAATATGCAGCAAATCTCAAGGCAAGAAAGTGCAGAACTCCAAATGATAACACTACATTACTTGAAATGGACCCTGGTAGCCGCAAGACATTTGATCTTA
GCTACTACAATCTTTTGCTTAAGAGAAGGGGTCTCTTTGTATCTGATGCTTCTTTGACTACAAACTCTTTCACTTTGTCTTTGGTTAAGCAACTTCTTCAGGGATCATTGGAAAATTTCT
TTGCTGAATTTGCCAAGTCTGTGGAGAAAATGGGAAGGAATAAGGTTAAGACTGGATCAGAAGGTGAGATCAGGAAGCGTTGCGCTTTTGTCAATTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAAGGATAGACTACATTGGTGTCGTATTTTTAAGTCTTTTTGGTGTTGTAGGCCTGAGTGAAGCTCAATTGCAACTGGGATTTTATGCTAAGAGCTGCCCAAGAGCTGAAAAGATT
GTGTTAGACTATGTTAACAAACACATCCACAATGCCCCCTCATTAGCCGCATCTTTCCTCAGAATGCATTTCCATGATTGCTTTGTCAGGGGCTGTGATGCATCCGTGCTGCTAAACTCA
ACAGGCAATCCTGAAAGAAATGCCGTTCCAAATCAAACATTGACAGGCGCAACCTTTGATTTCATCGAAAGAGTGAAGAGACTAGTCGAAGATGCATGCCCCGGCATAGTTTCTTGTGCA
GATATTCTTACGTTAGTTACAAGAGACTCTATTGTAGCCACAGGAGGTCCTTCCTGGAAAGTTCCAACCGGACGAAGAGACGGGCGAGTCTCCATTCGTTCAGAAGCCCAAAACAATATC
CCAGCTCCTACTAACAACTTCACCCTTCTTCAACGAAGTTTTGCTAATCAAGGACTTGATTTGAAGGACCTGGTTCTGCTCTCAGGTGCACACACAATCGGGGTCTCCCACTGCACTTCA
GTTTCAAGCCGGCTGTACAATTTCACAGGAGTGGGTGACCAAGACCCTGCTCTTGACAGTGAATATGCAGCAAATCTCAAGGCAAGAAAGTGCAGAACTCCAAATGATAACACTACATTA
CTTGAAATGGACCCTGGTAGCCGCAAGACATTTGATCTTAGCTACTACAATCTTTTGCTTAAGAGAAGGGGTCTCTTTGTATCTGATGCTTCTTTGACTACAAACTCTTTCACTTTGTCT
TTGGTTAAGCAACTTCTTCAGGGATCATTGGAAAATTTCTTTGCTGAATTTGCCAAGTCTGTGGAGAAAATGGGAAGGAATAAGGTTAAGACTGGATCAGAAGGTGAGATCAGGAAGCGT
TGCGCTTTTGTCAATTAG

Retrieve as FASTA