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Entry information : CclPrx53 (clementine0.9_016390m)
Entry ID 8709
Creation 2011-06-25 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: CclPrx53 (clementine0.9_016390m)
Name (synonym) CclPrx53 (clementine0.9_016390m)
Class Class III peroxidase    [Orthogroup: Prx015]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus clementina    [TaxId: 85681 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CclPrx53
start..stop		 S start..stop
CppPrx09 644 0 1..312 1..312
CsPrx11 642 0 1..312 1..312
MePrx02 516 0 5..312 6..316
GhPrx23 513 0 1..312 1..317
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8709' 'complement(join(3001180..3001562,3001654..3001816,3001913..3002101,3002210..3002413))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3002210..3002413 202 N° 2 3001913..3002101 187 N° 3 3001654..3001816 161 N° 4 3001180..3001562 381
complement(join(3001180..3001562,3001654..3001816,3001913..3002101,3002210..3002 413))


exon

Literature and cross-references CclPrx53 (clementine0.9_016390m)
DNA ref. Phytozome 12:   scaffold_25 (3002413..3001180)
Protein sequence: CclPrx53 (clementine0.9_016390m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   312 (290)
PWM (Da):   %s   33373.76 (31076.6)  
PI (pH):   %s   8.57 (8.40) Peptide Signal:   %s   cut: 23 range:23-312
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFRVAFLTSLLILSMSSSGNALSLNYYEKTCPDAEWIIAAAVKA
AAAKDKTVPAALLRMHFHDCFIRGCDASVLLNSKGSNKAEKDGPPNVSLHAFYVIDNAKKQVEALCPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRTSKASETVQLPAPTFNISQLQQSFSQRGLSMEDLAALSGGH
TLGFAHCSSFQSRINMNNADPTINPSFAESLRNICPIHNQAKNAGANMDASSATFDNTYYKLILQGKSLFASDQALLSHPETKNLVSKFASSHQSFNEAFVKSMIKMSSINGGQEVRKDC
RVVN

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATTTCGAGTTGCATTCTTGACCTCACTCCTCATACTTTCAATGTCTTCATCAGGAAATGCACTGAGTTTGAATTACTATGAGAAAACATGCCCTGATGCTGAGTGGATCATTGCG
GCTGCTGTCAAGGCTGCAGCTGCAAAAGATAAAACTGTCCCTGCAGCATTACTTCGGATGCATTTTCACGACTGTTTTATTAGGGTATTAAGTTTCCTATTGATCTCACTCGTTAAAATT
GATTTTTTATTTTTTTTTTGACGATTCAAAGTTCATTTTGGTCTAAATCGCTTGCATTTCTTTTCTGTTAAGGGGGATGTGATGCATCAGTCCTGTTAAATTCAAAGGGGAGCAACAAGG
CAGAAAAGGATGGACCTCCTAATGTTTCTTTGCATGCATTCTATGTCATTGATAACGCAAAGAAACAAGTAGAAGCATTGTGCCCCGGTGTTGTCTCGTGTGCTGATATTTTGGCATTGG
CCGCCAGAGATGCTGTTGTCCTCGTAAGATACTGCAACTAATATACTTTCTATTAACCAATTAATTTTTCCCCTTAAAATTGATCATCTTTGGATTGCTTATTTGATTTAATCTCACAGT
CTCTGGAGGTCCAACTTGGGACGTGCCTAAAGGAAGAAAAGATGGAAGAACATCCAAGGCTAGTGAAACAGTACAATTGCCCGCTCCGACCTTCAACATTTCTCAATTACAGCAGAGTTT
CTCCCAGCGAGGTCTATCAATGGAGGACCTAGCAGCTCTTTCAGGTAAACATGCCCCACCTGCCACGGTCATCCATATAGCAAATTGCATTTATGAGCAGACAATGACAATGTTTTGGTT
ATGACTCTTTTGTAGGAGAGGGCATACTCTAGGATTTGCTCACTGTTCCTCCTTCCAAAGCAGAATAAACATGAACAATGCCGACCCTACAATAAATCCTTCATTTGCAGAGAGCTTGAG
GAATATTTGTCCAATCCACAACCAGGCAAAGAATGCTGGTGCTAACATGGATGCTTCTTCAGCAACTTTTGATAATACATACTACAAGCTTATCCTGCAGGGAAAGAGCTTGTTTGCTTC
AGACCAAGCTCTGCTCAGTCACCCAGAGACCAAAAATTTAGTTTCTAAATTTGCCAGCTCACACCAATCTTTCAATGAAGCTTTTGTGAAGTCTATGATCAAAATGAGTAGCATCAATGG
AGGACAGGAGGTCCGGAAAGATTGTAGGGTGGTAAACTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATTTCGAGTTGCATTCTTGACCTCACTCCTCATACTTTCAATGTCTTCATCAGGAAATGCACTGAGTTTGAATTACTATGAGAAAACATGCCCTGATGCTGAGTGGATCATTGCG
GCTGCTGTCAAGGCTGCAGCTGCAAAAGATAAAACTGTCCCTGCAGCATTACTTCGGATGCATTTTCACGACTGTTTTATTAGGGGATGTGATGCATCAGTCCTGTTAAATTCAAAGGGG
AGCAACAAGGCAGAAAAGGATGGACCTCCTAATGTTTCTTTGCATGCATTCTATGTCATTGATAACGCAAAGAAACAAGTAGAAGCATTGTGCCCCGGTGTTGTCTCGTGTGCTGATATT
TTGGCATTGGCCGCCAGAGATGCTGTTGTCCTCTCTGGAGGTCCAACTTGGGACGTGCCTAAAGGAAGAAAAGATGGAAGAACATCCAAGGCTAGTGAAACAGTACAATTGCCCGCTCCG
ACCTTCAACATTTCTCAATTACAGCAGAGTTTCTCCCAGCGAGGTCTATCAATGGAGGACCTAGCAGCTCTTTCAGGAGGGCATACTCTAGGATTTGCTCACTGTTCCTCCTTCCAAAGC
AGAATAAACATGAACAATGCCGACCCTACAATAAATCCTTCATTTGCAGAGAGCTTGAGGAATATTTGTCCAATCCACAACCAGGCAAAGAATGCTGGTGCTAACATGGATGCTTCTTCA
GCAACTTTTGATAATACATACTACAAGCTTATCCTGCAGGGAAAGAGCTTGTTTGCTTCAGACCAAGCTCTGCTCAGTCACCCAGAGACCAAAAATTTAGTTTCTAAATTTGCCAGCTCA
CACCAATCTTTCAATGAAGCTTTTGTGAAGTCTATGATCAAAATGAGTAGCATCAATGGAGGACAGGAGGTCCGGAAAGATTGTAGGGTGGTAAACTAA

Retrieve as FASTA