Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
188 |
PWM (Da): |
20012.44 |
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PI (pH):
| 10.39 |
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Sequence 308
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MASSLGTVASSRLLSSSKARLCLSSSSSSPSISTLSLSSLRCLSSSPLISRLSLNQRSFVNVSNGGFSTVATAKSAASDPDQLKSAKEDIKELLRTKFCHPILVRLGWHDAGTYNKNIEEWPQRGGANGSLRFEVELKHAANAGLVNALKLIQPIKDKRLGVQKSPMKYGRVDASGPDQCPEEGRLPG |
Retrieve as FASTA
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Remarks |
Partial sequence from genomic. Incorrect prediction from phytozome (A big gap in frame due to the NNNNNNNNN in DNA sequence). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGTCTTCTCTTGGCACCGTCGCTTCATCACGCTTACTCTCCTCCTCTAAAGCCAGACTCTGTCTCTCCTCCTCCTCCTCCTCCCCGTCTATATCTACACTCTCTCTTTCGTCTCTC AGATGTCTCTCTTCCTCCCCTCTCATTTCTCGTCTCTCTCTCAATCAGGTTTCACCTCTCATTTCTATTTTTCTATCTCCCTATCTATGTTTATATTTGTGATATTTGATTGTTGTGATC GTTTCCTTCTAGAATACGTGGTTATGGGTTTATTCATTTGCTTTGCTTGCTTATTTGTATTTATTTTTGGTGATTTTTGAAGAGATCTTTTGTTAACGTGAGCAATGGAGGTTTTAGCAC TGTGGCTACTGCGAAATCTGCAGCTTCTGATCCCGATCAGTTGAAGAGTGCCAAGGAAGACATCAAAGAGCTACTCAGGACTAAGTTTTGCCATCCTATCCTGGTATGATTTTAATTTGG TTTACATACAGTCTACAATAATACACAAACATACTACATGTGCATGTGCTTTTTAGGTGAATTGAACCAGTAATTGATTCGCGAGGTTAATAATTTTGCATTTGATTATTTTCTTTATAA TCTTGTTCATGGGATTTGCCAGCTTTATATTCTTAATTTTCTTGTTTAGTTTAACGCTCTTCGGAATTGCATAACAATTCTAATCTTCGAGTACTTTTCATTCTTTCCTTACTTCTTCTT GGAAAAAAAAAAAAAAAACCGAAGACCAGCTCCTTGATAACAGTACTTTGTTTTCTTAGTTTCCTTACTGTAATATGTTGGACTTATCTTTTCCTGCTGTTGACTGGAAGATTCGAGGAG TAGATTGCAGGAGCTTGTTAAGAACTGAACTGTTTTATCATCTGAAATAATTTTGTACCACAGGTTCGCCTGGGCTGGCATGATGCCGGTACATATAACAAAAACATTGAGGAGTGGCCA CAGAGGGGTGGAGCTAATGGGAGCCTTAGATTTGAAGTTGAACTAAAGCATGCAGCCAATGCCGGTAATTTTTTGACTTTGATATATTATGTGGGTTGGCTGATCCTGCTCTGACTCGGT AGCTGGCTTTTTCAGGTCTTGTGAATGCATTAAAACTAATTCAGCCCATCAAAGATAAGTACTCTGGTGTCACATACGCAGACTTATTTCAGTTGGCCAGTGCCACTGCAGTGGAGGTTC TTATTGTTCCAATTCTTAGATATATATCTGTAGCATTAACTTCTTTTGAACAATTAAAGATCTACTGGTGAACCTTGTTTATTCAGGAGGCTGGGGGTCCAAAAATCCCCCATGAAATAT GGAAGAGTGGATGCATCGGGGCCTGATCAGTGCCCTGAAGAAGGGAGACTTCCTGGTTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGTCTTCTCTTGGCACCGTCGCTTCATCACGCTTACTCTCCTCCTCTAAAGCCAGACTCTGTCTCTCCTCCTCCTCCTCCTCCCCGTCTATATCTACACTCTCTCTTTCGTCTCTC AGATGTCTCTCTTCCTCCCCTCTCATTTCTCGTCTCTCTCTCAATCAGAGATCTTTTGTTAACGTGAGCAATGGAGGTTTTAGCACTGTGGCTACTGCGAAATCTGCAGCTTCTGATCCC GATCAGTTGAAGAGTGCCAAGGAAGACATCAAAGAGCTACTCAGGACTAAGTTTTGCCATCCTATCCTGGTTCGCCTGGGCTGGCATGATGCCGGTACATATAACAAAAACATTGAGGAG TGGCCACAGAGGGGTGGAGCTAATGGGAGCCTTAGATTTGAAGTTGAACTAAAGCATGCAGCCAATGCCGGTCTTGTGAATGCATTAAAACTAATTCAGCCCATCAAAGATAAGAGGCTG GGGGTCCAAAAATCCCCCATGAAATATGGAAGAGTGGATGCATCGGGGCCTGATCAGTGCCCTGAAGAAGGGAGACTTCCTGGTTAG |
Retrieve as FASTA
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