Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
347 |
| PWM (Da): |
38011.56 |
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| PI (pH): |
8.58 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MESIGVSFLS TVPSLVPPVS VRTLHSTRHP VVSGAIRCQK IEADVTGENG FHRRDILKYF GAAIGMELMS SGPFTGTAFA ADLIQRRQRS EFQSSVKETL FTLIKGNPDI VPSILTLALN
DAMTYDKATK SGGPNGSIRL SSELSRPENK GLSAALNLLM EAKKEIDSYS RGGPISFADL IQFAAQSAVK DTFLASAIRK CGGNEEKGRL LYTAYGSNGQ WGLFDKQFGR SDTQEPDPEG
RVPQWEKASV QEMKDKFLAI GFGPRQLAVM SAFLGPDQTA TEALLATDPD VSKWVQKYQR SRETVSQTDY EVDLITTLTK LSSLGQKINY EAYTYPVQKV DLSKLKL*
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic and ESTs. Incorrect prediction from phytozome (Both 5' and 3' end are missing due to frame shift and N in the sequence). |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGAGTCCA TTGGAGTTTC TTTTCTCTCA ACAGTCCCTT CTTTGGGTTC CCCCCGTGTC TGTCCGGACT CTACACTCTA CCAGACACCC AGTTGTGGCA GTAGTCTACT TGATTCGTCT
CTTTCAACTT CCTCTCTCCC TCTCTCTCTC TCTCnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnTTGGTAT GGTAAGAGCA TTTCTGTTGA TTTCTTTCTT ATTAATGTAC TATTAGTAAT TTCATCTGTC TGTGTCGGCA CTCTCATTTC ATTTAGTTGG ACTCATTATT
AGGGAATTCA AATGTATATG ATATTTAAAA AAGGGCAGAG CGCCTTGTTG CTTCCTTTTT CCTGATTATG AGCATGGGGG GATTACTTTC TTTTCCTCTA GTTATATCCT AGTGGTGTGG
TGTCCTGGAG TTGTTGCTTC TCTGTGGCCT CTGGGTTCAT TCCACTCCAT CGTACCGGAA AAATAAAAGA TTCCATGAAT GGACAACGGA TAATATTGGT AGATAGATGG AACTGAAGAA
TCGCTAAGAA TAGGACGTTG GAGATAGAAA TAGCCATTCA ACAATAGGAG TCAGATTGCT GTTAGGCCAC AAAGCTGGAA CCATATGCTA TTAGTACTTC TTTCTAGATG CAACTCTTTG
AGAAATGTTT GACTTCATGA ATTGGAATTA TGTGATCATA AGTTTCTGCC AGTTATGATC TTTGCTTAGG AATTAATGAG CTCGGGCCCA TTTACTGGGA CTGCATTTGC TGCTGATTTG
ATACAACGCC GTCAGCGTTC TGAATTTCAA TGTGAGTTTT ATAAGTTTAC TTTTCCATGC CTGAATTAAC AATTTCTTGC TGATTTGATG ATTCTATTTT TCTGTTTTTT TTTCTTTTTC
TTAACAGCAA GTGTTAAGGA AACACTTTTT ACGCTTATAA AGGTAAGTCT ATTTTATCTT CTCATGAGTC CAAGTACCAT AACGTGTAAA TGTGTATATA TGTATCTATT GTTTACCATC
CTTTCAGTGT ACACTGACCT TCGATCTTTT TCTGCATTAA TTCAAGGGAA ATCCTGATAT TGTTCCATCA ATACTAACTT TGGCATTGAA TGATGCCATG ACTTATGATA AGGTCAGATA
GAAAACTTTT CCTTGTAAAC ATCAATATGG ATGCTACAAT TTTTTTTTTT TTAACTTTGT TATGGAAACA GAAAGTTCAT TGATGAATTG CTGATAATTT TCTAGGCTAC AAAATCTGGG
GGCCCAAATG GATCAATACG GCTCAGGTAT TTGCCACATT AATCATCATC TCAAATGAGC TAGTGTGAAT TAGCTACAAT CTAGATACCG TTTTGTTTTT CAATTTTCTG GCTTGTAGGT
ACCAGTTACT GGTTACCTGA GATTCCAATA TGCTACATAT ATTTCCTAGA GAGAGTTAAG TAAGATCATA ACAAAATAAA TTCAAAGATA TTCAGATTCT TGTGAATCGT GAATTGAACA
CGTTCCTTAA ATAATCAACC TGGTTTTTGC AGGGAACAAG TTTGCTTCCG CAATCAATTT CAGGTTTTCA AAGCATGATT AATTTAGTCT TTTTGGAAAC AAAATTTAAA AATTTCTTTT
CCATCAATTT TCTTGCATGA AGCTCTGAGT TAAGCAGACC TGAGAATAAG GGGCTTTCTG CTGCTTTAAA TTTATTAATG GAAGCGAAGA AAGAGATCGA CTCATATTCT AGGGGTGGAC
CAATTTCCTT TGCAGATCTC ATTCAATTTG CAGGTAAAAT AACTAGCACA AGCAAAATTT GAATTATGCC ATGTTTGTTA TGGTCATCTA ACACAGAGGT GTGTGAGATA GAGGTCTAGC
AGGCCTGAAT AGGTTTTGTT CATTCTATGT AGCACAAAGT GCTGTTAAGG ACACGTTTCT TGCATCTGCA ATTCGCAAAT GTGGTGGGAA TGAAGAAAAG GGGAGATTAT TATACACTGC
ATATGGGTCA AATGGGCAGG TTCGTTTGTT AATGATTTGT GTCTTACAAT AATTGTCATT CTTTACATGT TGGATTCATG CAGCAAAAGT AGGAGTTTAT TTCTCAGTTT AGTGTACTTC
ATGGAACTCC TTCAGATTAG TTTGTGCCAA TCAATCACCA ATCCACCATA AGCAGATGTT GTTTTTCTTT TCCCACTGGG CGGTCCTAAG TTGGAGGTGT TCCCTAGCCG ACCATAAACT
ATTCTTAGCC ATTGCTAATT GCTATCTTGA AATGATCATG GTGACCTTAC AGGCCCCTTT GATCCGTACA ACCTTGTTTA CAATTTCTGA TGGTAGCTTT GCAGTTTCAT TGTGGTCCAA
GTAAAGGTTT TTGTACCCTC AAATGGGGCA GAATTATAGT TTGAGGGGCC TGAACATAAT AGCAGAAGTA ACAATGATCT TAATGAGGTG CTTCTAATGG AATATACATT GTCCATGTGC
TCAATTCATC TTGTAATATT TAGTTGACTG GGATGATGAT CAGGTTGTTC TTGCATATGA AGTTTGGCTT ATGGGTGCGT TCCTTATTTG TTCATACAGT GGGGCCTATT TGATAAACAA
TTTGGAAGGA GTGATACACA GGAACCAGAT CCAGAGGGAA GGGTTCCTCA GTGGGAGAAA GCAAGTGTAC AGGAAATGAA AGACAAGTTC TTGGCAATTG GATTTGGTCC ACGCCAGGTA
AATTTGTCAA ATATATATGC TTGTATTGAG ATCTTGTAAC CTCAAAAAAT CGAAACAAGC ATTCAAGATG GCTCATCATA TTCAAATGAG TAAAGTCAGC AGTGTAAAGG ACTTCCTGAG
CAATTGTTAC GCATATGCTG CTTAAAGATA TTTGAGACAG AACACTATTC TATAATTGTA TTGGTTTTTA CTTTAAAACA GCACAGCCAA GTTATTAGAA CGAGCTTAAG TTTTTATACT
TAGGCAAGTA CAGGTTATGC ACAGTCCATT CGCTGCTACT GCAAGAAATA ACAAGCGACA AATTTACTAA CTGCCTAAGT TTATTTGCTG AAGTTGCTCG CTCATATTTA TCCTCCAAAT
CTCCTTTGAA TTGGTCTCTT ATCCTGGTCA TTTTTCTTTA AGGGATCTAT TCTATGCTCT CATGTCCGCA TCAGGTAACT GATTTCTCAT GAAAGGCACT AATCAAATTC ACATGTTCTA
TTCTTTTTTC CTTGTTGACC AGCTAGCTGT CATGTCCGCA TTCTTGGGTC CTGATCAGAC TTGGCAACCG ATCCAGATGT CTCTAAATGG GTTCAAAAAT ATCAGCGAAG CCGTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGAGTCCA TTGGAGTTTC TTTTCTCTCA ACAGTCCCTT CTTTGGTTCC CCCCGTTTCT GTCCGGACTC TACACTCTAC CAGACACCCA GTTGTGGAAT TAATGAGCTC GGGCCCATTT
ACTGGGACTG CATTTGCTGC TGATTTGATA CAACGCCGTC AGCGTTCTGA ATTTCAATCA AGTGTTAAGG AAACACTTTT TACGCTTATA AAGGGAAATC CTGATATTGT TCCATCAATA
CTAACTTTGG CATTGAATGA TGCCATGACT TATGATAAGG CTACAAAATC TGGGGGCCCA AATGGATCAA TACGGCTCAG CTCTGAGTTA AGCAGACCTG AGAATAAGGG GCTTTCTGCT
GCTTTAAATT TATTAATGGA AGCGAAGAAA GAGATCGACT CATATTCTAG GGGTGGACCA ATTTCCTTTG CAGATCTCAT TCAATTTGCA GCACAAAGTG CTGTTAAGGA CACGTTTCTT
GCATCTGCAA TTCGCAAATG TGGTGGGAAT GAAGAAAAGG GGAGATTATT ATACACTGCA TATGGGTCAA ATGGGCAGTG GGGCCTATTT GATAAACAAT TTGGAAGGAG TGATACACAG
GAACCAGATC CAGAGGGAAG GGTTCCTCAG TGGGAGAAAG CAAGTGTACA GGAAATGAAA GACAAGTTCT TGGCAATTGG ATTTGGTCCA CGCCAGCTAG CTGTCATGTC CGCATTCTTG
GGTCCTGATC AGACTGCAAC CGAGGCCCTA CTGGCAACCG ATCCAGATGT CTCTAAATGG GTTCAAAAAT ATCAGCGAAG CCGTGAAACA GTGTCCCAGA CAGATTACGA GGTTGATCTA
ATTACTACTC TCACAAAATT AAGTTCCCTG GGACAAAAGA TCAATTACGA GGCATACACA TATCCAGTCC AAAAAGTGGA TCTAAGCAAG CTAAAATTGT AG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CGGCCGGAAA TTCCCGGGTA TTCGGCATTA CGGCCGGGGG CTAGACAGAA ACAGATTACA ATGGAGTCCA TTGGAGTTTC TTTTCTCTCA ACAGTCCCTT CTTTGGTTCC CCCCGTTTCT
GTCCGGACTC TACACTCTAC CAGACACCCA GTTGTGGAAT TAATGAGCTC GGGCCCATTT ACTGGGACTG CATTTGCTGC TGATTTGATA CAACGCCGTC AGCGTTCTGA ATTTCAATCA
AGTGTTAAGG AAACACTTTT TACGCTTATA AAGGGAAATC CTGATATTGT TCCATCAATA CTAACTTTGG CATTGAATGA TGCCATGACT TATGATAAGG CTACAAAATC TGGGGGCCCA
AATGGATCAA TACGGCTCAG CTCTGAGTTA AGCAGACCTG AGAATAAGGG GCTTTCTGCT GCTTTAAATT TATTAATGGA AGCGAAGAAA GAGATCGACT CATATTCTAG GGGTGGACCA
ATTTCCTTTG CAGATCTCAT TCAATTTGCA GCACAAAGTG CTGTTAAGGA CACGTTTCTT GCATCTGCAA TTCGCAAATG TGGTGGGAAT GAAGAAAAGG GGAGATTATT ATACACTGCA
TATGGGTCAA ATGGGCAGTG GGGCCTATTT GATAAACAAT TTGGAAGGAG TGATACACAG GAACCAGATC CAGAGGGAAG GGTTCCTCAG TGGGAGAAAG CAAGTGTACA GGAAATGAAA
GACAAGTTCT TGGCAATTGG ATTTGGTCCA CGCCAGCTAG CTGTCATGTC CGCATTCTTG GGTCCTGATC AGACTGCAAC CGAGGCCCTA CTGGCAACCG ATCCAGATGT CTCTAAATGG
GTTCAAAAAT ATCAGCGAAG CCGTGAAACA GTGTCCCAGA CAGATTACGA GGTTGATCTA ATTACTACTC TCACAAAATT AAGTTCCCTG GGACAAAAGA TCAATTACGA GGCATACACA
TATCCAGTCC AAAAAGTGGA TCTAAGCAAG CTAAAATTGT AGAGAAGCTG TATCTAATCG ACCAGAGCTG CCACTTTGTG AATGTGGCAA CAGTTTTGTC TTATGGGAGC TTCCATTTTC
TTCAGGATGG TCCAGCATAT GCTTTATATC TCAGTTGACA TCTTGAGATC ATCAAAGCGG AGCACTCAGA TATTAATCTT GTTTAAAGCA A
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Retrieve as FASTA
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