The peroxidases and oxidases database
Entry information : CpapPrx13 (evm.model.supercontig_16.92)
Entry ID 8747
Creation 2011-06-28 (Qiang Li)
Last sequence changes 2012-01-05 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-11-30 (Qiang Li)
Peroxidase information: CpapPrx13 (evm.model.supercontig_16.92)
Name (synonym) CpapPrx13 (evm.model.supercontig_16.92)
Class Class III peroxidase     [Orthogroup: Prx013]*
Taxonomy Eukaryota Viridiplantae Streptophyta Caricaceae Carica
Organism Carica papaya    [TaxId: 3649 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CpapPrx13
start..stop		 S start..stop
AlyPrx24 386 2e-135 1..296 34..339
BrPrx24-1Aa_other 384 3e-134 1..296 47..353
CagraPrx53 382 1e-133 1..296 36..341
BstrPrx84 381 3e-133 1..296 36..341
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1489405..1489567 163 N° 2 1488783..1488974 192 N° 3 1488511..1488676 166 N° 4 1487895..1488288 394
complement(join(1487895..1488288,1488511..1488676,1488783..1488974,1489405..1489 567))


exon

Literature and cross-references CpapPrx13 (evm.model.supercontig_16.92)
DNA ref. Phytozome 12:   supercontig_16 (1489567..1487895)
Protein sequence: CpapPrx13 (evm.model.supercontig_16.92)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   306
PWM (Da):   %s   33075.74  
PI (pH):   %s   7.34
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
RIGHGKGELRMMFYHKTCPQVEEVVKxDITWSKVENNPSMAAKLLRLQYHDCFVRGCDASILLDSTSGNTSEKDARPNLSLSGYEVIDDIKAKLEQECPKTVSCADIVALAARDAVSFQFKRSLWNVVTGRQDGRVSLASEAVRDLPSAGANFTTLQQQFAANGLDVTDLVALSGAHTIGGARCxxFARRLFNFSGKDDIDPSLNSDYANFLIRKCSDRTALVEMDPGSSLLFDTDYFKAVKQNKGLFMSDAALLTNPRSAFIVKLFQNPLLFFSQFGASMQKMGQIKGDDSDGVRLGGVIALLIN

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (Very short 5' end is missing and frame shift before FHDC). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGTCATGGCAAGGGCGAGCTAAGGATGATGTTCTATCACAAGACTTGTCCTCAGGTTGAGGAGGTTGTGAAGGNNGATATTACATGGAGTAAAGTTGAGAATAATCCAAGCATGGCAGCT
AAGCTACTGAGGCTGCAATACCATGACTGTTTTGTTAGGGTATGTTCCCTTTTAAATCCTTCTAATCTCTTCAAATTATATATGTAAGAATATATATATAAGTATATTTTGTTGATCCAC
AAGTGTTAATCCAGTTGGTAAAGAATGTTCTACATATTTGATCAATTTATATTAATGTATGGAAGTATTGATCCTAGCAGCACCATCTGATGGGTCCATGGGAGTACATTCTTAATTAAA
ACTACCAAGAGAAGAACATAGTTTTGGCATGTAGAAGCTGGTTCAAAAGTATTCATACTGCTAGAACAGTACACACACACACGAAAGATACAATATTATTTTGTTAGGCTATGTTTCGCT
TGTTTTAACATCAAAAGTTTTTTAGCTTTCTAATCATGATTACTGACTGTCTTATGTGCGTTAATTAGCCAAAAAAATCAATTGTTTCACAGTATACGCGTTCTTGCAGGGATGTGATGC
ATCCATATTATTGGATTCAACTAGCGGTAACACATCTGAGAAAGATGCAAGACCAAATCTCTCGTTATCCGGTTACGAGGTCATTGATGACATAAAAGCTAAACTAGAACAGGAATGTCC
CAAAACCGTGTCGTGTGCTGATATCGTTGCCTTGGCAGCTCGTGATGCTGTTTCATTTCAAGTAAGATACGGCCAATTATTAACTTTTGATGCTTATGGCAGTGGCACTGGTCTCTAACA
TGCATGAATATGTGAACTTATATATGTGTGCGTATGTATATATGCAGTTTAAAAGATCGCTATGGAATGTTGTGACTGGGAGGCAAGATGGAAGAGTTTCACTTGCCTCAGAGGCTGTAA
GAGATTTACCATCTGCAGGAGCAAACTTCACCACTCTCCAACAGCAATTTGCAGCTAATGGCCTTGATGTCACAGACCTTGTTGCTTTATCAGGTATTCTTTATTTTATTATATTATGAT
TTTTTAATGTTAATTTAGACCTAATTTCGATTACTCTTTAAAAAAATATATTGTTTTTAAATAAAAATATATAAATAAGATAATACATAATCATAATATAACTTTTCAATAAGAATTCAG
GTAATGTATAATCTAATTCAAACCTATAAATTCATATGAAGAAATCGTGATGAGATATAAATTTAATTTGTATAGGAGCGCATACAATTGGAGGTGCACGTTGTGCNNNNTTTGCGAGGA
GACTATTCAATTTCAGTGGAAAAGATGATATTGATCCTTCATTGAATTCAGACTATGCAAATTTCTTGATAAGAAAATGTTCTGATCGGACGGCGTTGGTGGAAATGGATCCCGGAAGTT
CGCTATTGTTTGATACCGATTACTTCAAGGCAGTTAAGCAGAACAAAGGATTGTTTATGTCAGATGCAGCTCTCCTCACTAATCCTCGTTCGGCTTTCATCGTTAAGCTTTTCCAAAATC
CTCTACTTTTCTTTTCCCAGTTTGGAGCTTCAATGCAGAAAATGGGTCAAATTAAAGGAGATGATTCTGATGGGGTGAGATTAGGAGGAGTTATCGCTTTGTTAATTAATTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGTCATGGCAAGGGCGAGCTAAGGATGATGTTCTATCACAAGACTTGTCCTCAGGTTGAGGAGGTTGTGAAGGNNGATATTACATGGAGTAAAGTTGAGAATAATCCAAGCATGGCAGCT
AAGCTACTGAGGCTGCAATACCATGACTGTTTTGTTAGGGTATGTGATGCATCCATATTATTGGATTCAACTAGCGGTAACACATCTGAGAAAGATGCAAGACCAAATCTCTCGTTATCC
GGTTACGAGGTCATTGATGACATAAAAGCTAAACTAGAACAGGAATGTCCCAAAACCGTGTCGTGTGCTGATATCGTTGCCTTGGCAGCTCGTGATGCTGTTTCATTTCAAGTAAAAAGA
TCGCTATGGAATGTTGTGACTGGGAGGCAAGATGGAAGAGTTTCACTTGCCTCAGAGGCTGTAAGAGATTTACCATCTGCAGGAGCAAACTTCACCACTCTCCAACAGCAATTTGCAGCT
AATGGCCTTGATGTCACAGACCTTGTTGCTTTATCAGGTATGCATACAATTGGAGGTGCACGTTGTGCNNNNTTTGCGAGGAGACTATTCAATTTCAGTGGAAAAGATGATATTGATCCT
TCATTGAATTCAGACTATGCAAATTTCTTGATAAGAAAATGTTCTGATCGGACGGCGTTGGTGGAAATGGATCCCGGAAGTTCGCTATTGTTTGATACCGATTACTTCAAGGCAGTTAAG
CAGAACAAAGGATTGTTTATGTCAGATGCAGCTCTCCTCACTAATCCTCGTTCGGCTTTCATCGTTAAGCTTTTCCAAAATCCTCTACTTTTCTTTTCCCAGTTTGGAGCTTCAATGCAG
AAAATGGGTCAAATTAAAGGAGATGATTCTGATGGGGTGAGATTAGGAGGAGTTATCGCTTTGTTAATTAATTAG

Retrieve as FASTA