Entry information : CpapPrx13 (evm.model.supercontig_16.92)
Entry ID 8747
Creation 2011-06-28 (Qiang Li)
Last sequence changes 2012-01-05 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-11-30 (Qiang Li)
Peroxidase information: CpapPrx13 (evm.model.supercontig_16.92)
Name (synonym) CpapPrx13 (evm.model.supercontig_16.92)
Class Class III peroxidase     [Orthogroup: Prx013]*
Taxonomy Eukaryota Viridiplantae Streptophyta Caricaceae Carica
Organism Carica papaya    [TaxId: 3649 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CpapPrx13
start..stop
S start..stop
AlyPrx24 386 2.86e-135 1..296 34..339
BrPrx24-1Aa_other 384 3e-134 1..296 47..353
CagraPrx53 382 1.49e-133 1..296 36..341
BstrPrx84 381 2.89e-133 1..296 36..341
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8747' 'complement(join(1487895..1488288,1488511..1488676,1488783..1488974,1489405..1489567))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1489405..1489567 161 N° 2 1488783..1488974 190 N° 3 1488511..1488676 164 N° 4 1487895..1488288 392
complement(join(1487895..1488288,1488511..1488676,1488783..1488974,1489405..1489 567))


exon

Literature and cross-references CpapPrx13 (evm.model.supercontig_16.92)
DNA ref. Phytozome 12:   supercontig_16 (1489567..1487895)
Protein sequence: CpapPrx13 (evm.model.supercontig_16.92)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   306
PWM (Da):   %s   33075.74  
PI (pH):   %s   7.34
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
RIGHGKGELRMMFYHKTCPQVEEVVKxDITWSKVENNPSMAAKLLRLQYHDCFVRGCDASILLDSTSGNTSEKDARPNLSLSGYEVIDDIKAKLEQECPKTVSCADIVALAARDAVSFQF
KRSLWNVVTGRQDGRVSLASEAVRDLPSAGANFTTLQQQFAANGLDVTDLVALSGAHTIGGARCxxFARRLFNFSGKDDIDPSLNSDYANFLIRKCSDRTALVEMDPGSSLLFDTDYFKA
VKQNKGLFMSDAALLTNPRSAFIVKLFQNPLLFFSQFGASMQKMGQIKGDDSDGVRLGGVIALLIN

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (Very short 5' end is missing and frame shift before FHDC). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGTCATGGCAAGGGCGAGCTAAGGATGATGTTCTATCACAAGACTTGTCCTCAGGTTGAGGAGGTTGTGAAGGNNGATATTACATGGAGTAAAGTTGAGAATAATCCAAGCATGGCAGCT
AAGCTACTGAGGCTGCAATACCATGACTGTTTTGTTAGGGTAT
GTTCCCTTTTAAATCCTTCTAATCTCTTCAAATTATATATGTAAGAATATATATATAAGTATATTTTGTTGATCCAC
AAGTGTTAATCCAGTTGGTAAAGAATGTTCTACATATTTGATCAATTTATATTAATGTATGGAAGTATTGATCCTAGCAGCACCATCTGATGGGTCCATGGGAGTACATTCTTAATTAAA
ACTACCAAGAGAAGAACATAGTTTTGGCATGTAGAAGCTGGTTCAAAAGTATTCATACTGCTAGAACAGTACACACACACACGAAAGATACAATATTATTTTGTTAGGCTATGTTTCGCT
TGTTTTAACATCAAAAGTTTTTTAGCTTTCTAATCATGATTACTGACTGTCTTATGTGCGTTAATTAGCCAAAAAAATCAATTGTTTCACAGTATACGCGTTCTTGCAGGGATGTGTGAT
GCATCCATATTATTGGATTCAACTAGCGGTAACACATCTGAGAAAGATGCAAGACCAAATCTCTCGTTATCCGGTTACGAGGTCATTGATGACATAAAAGCTAAACTAGAACAGGAATGT
CCCAAAACCGTGTCGTGTGCTGATATCGTTGCCTTGGCAGCTCGTGATGCTGTTTCATTTCAAGTAA
GATACGGCCAATTATTAACTTTTGATGCTTATGGCAGTGGCACTGGTCTCTAA
CATGCATGAATATGTGAACTTATATATGTGTGCGTATGTATATATGCAGTTTAAAAAAGATCGCTATGGAATGTTGTGACTGGGAGGCAAGATGGAAGAGTTTCACTTGCCTCAGAGGCT
GTAAGAGATTTACCATCTGCAGGAGCAAACTTCACCACTCTCCAACAGCAATTTGCAGCTAATGGCCTTGATGTCACAGACCTTGTTGCTTTATCAGGTAT
TCTTTATTTTATTATATTA
TGATTTTTTAATGTTAATTTAGACCTAATTTCGATTACTCTTTAAAAAAATATATTGTTTTTAAATAAAAATATATAAATAAGATAATACATAATCATAATATAACTTTTCAATAAGAAT
TCAGGTAATGTATAATCTAATTCAAACCTATAAATTCATATGAAGAAATCGTGATGAGATATAAATTTAATTTGTATAGGAGCGCGCATACAATTGGAGGTGCACGTTGTGCNNNNTTTG
CGAGGAGACTATTCAATTTCAGTGGAAAAGATGATATTGATCCTTCATTGAATTCAGACTATGCAAATTTCTTGATAAGAAAATGTTCTGATCGGACGGCGTTGGTGGAAATGGATCCCG
GAAGTTCGCTATTGTTTGATACCGATTACTTCAAGGCAGTTAAGCAGAACAAAGGATTGTTTATGTCAGATGCAGCTCTCCTCACTAATCCTCGTTCGGCTTTCATCGTTAAGCTTTTCC
AAAATCCTCTACTTTTCTTTTCCCAGTTTGGAGCTTCAATGCAGAAAATGGGTCAAATTAAAGGAGATGATTCTGATGGGGTGAGATTAGGAGGAGTTATCGCTTTGTTAATTAATTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGTCATGGCAAGGGCGAGCTAAGGATGATGTTCTATCACAAGACTTGTCCTCAGGTTGAGGAGGTTGTGAAGGNNGATATTACATGGAGTAAAGTTGAGAATAATCCAAGCATGGCAGCT
AAGCTACTGAGGCTGCAATACCATGACTGTTTTGTTAGGGTAT
GTGATGCATCCATATTATTGGATTCAACTAGCGGTAACACATCTGAGAAAGATGCAAGACCAAATCTCTCGTTATCC
GGTTACGAGGTCATTGATGACATAAAAGCTAAACTAGAACAGGAATGTCCCAAAACCGTGTCGTGTGCTGATATCGTTGCCTTGGCAGCTCGTGATGCTGTTTCATTTCAAGTAA
AAAGA
TCGCTATGGAATGTTGTGACTGGGAGGCAAGATGGAAGAGTTTCACTTGCCTCAGAGGCTGTAAGAGATTTACCATCTGCAGGAGCAAACTTCACCACTCTCCAACAGCAATTTGCAGCT
AATGGCCTTGATGTCACAGACCTTGTTGCTTTATCAGGTAT
GCATACAATTGGAGGTGCACGTTGTGCNNNNTTTGCGAGGAGACTATTCAATTTCAGTGGAAAAGATGATATTGATCCT
TCATTGAATTCAGACTATGCAAATTTCTTGATAAGAAAATGTTCTGATCGGACGGCGTTGGTGGAAATGGATCCCGGAAGTTCGCTATTGTTTGATACCGATTACTTCAAGGCAGTTAAG
CAGAACAAAGGATTGTTTATGTCAGATGCAGCTCTCCTCACTAATCCTCGTTCGGCTTTCATCGTTAAGCTTTTCCAAAATCCTCTACTTTTCTTTTCCCAGTTTGGAGCTTCAATGCAG
AAAATGGGTCAAATTAAAGGAGATGATTCTGATGGGGTGAGATTAGGAGGAGTTATCGCTTTGTTAATTAATTAG

Retrieve as FASTA