Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
345 (323) |
PWM (Da): |
36562.85 (34256.5) |
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PI (pH):
| 10.04 (9.90) |
Peptide Signal:
| cut: 23 range:23-345 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MGAPLLRRRL LLSLALLAAC CAAVGTAAAA KAKAPRLSPN YYRHSCPRVQ RIVSDVIAAK QRANPSTAAG TLRLFFHDCF VNGCDASVLV SPLSSTAAPE RRREITLSLP GDAFDAVARA
KAALESACPG VVSCADVLAL AARDLVGILG GPRFPVALGR RDSARSEARD VEGNLPRTNM SARAMVRLFA GKGLSAREMV ALAGAHTVGF SHCAEFAHRI YGYRGPGAAG AGAGHDPRLN
PEFARALQRS CAGYRTDPTV SIFNDIVTPS EFDEAYYKNL PHGLGLLASD AAIWEYPPTR VFAQRYSANR TAFFEDFAAA MQRLGAVGVK TGRQGVVRRR CDALD
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Retrieve as FASTA
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Remarks |
Complete sequence from DNA (no intron) and 8 ESTs. 1 base is missing in phytozome version (cf ESTs). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGCGCGC CGCTGCTCCG CCGCCGCCTC CTGCTGTCCC TCGCGCTCCT GGCCGCCTGC TGCGCCGCGG TGGGGACAGC GGCGGCGGCG AAAGCGAAAG CGCCCAGGCT GTCGCCCAAC
TACTACCGCC ACAGCTGCCC GCGGGTGCAG CGGATCGTGT CGGACGTCAT CGCGGCGAAG CAGCGCGCCA ACCCGTCGAC GGCGGCGGGC ACGCTGCGGC TCTTCTTCCA CGACTGCTTC
GTCAACGGCT GCGACGCCTC CGTGCTGGTC TCCCCGCTCT CCTCCACCGC GGCCCCGGAG CGCCGGCGGG AGATCACCCT CTCCCTGCCC GGGGACGCGT TCGACGCCGT GGCCCGCGCC
AAGGCGGCGC TGGAGTCCGC CTGCCCCGGC GTGGTGTCCT GCGCCGACGT CCTGGCGCTG GCGGCGCGGG ACCTCGTGGG GATCCTTGGC GGGCCACGGT TCCCCGTCGC GCTGGGCCGC
CGCGACTCCG CCCGCTCCGA GGCGCGCGAC GTGGAGGGCA ACCTGCCACG CACCAACATG TCGGCGCGCG CCATGGTGCG GCTCTTCGCG GGCAAGGGGC TCTCGGCCCG GGAGATGGTG
GCGCTGGCCG GCGCCCACAC CGTGGGCTTC TCCCACTGCG CCGAGTTCGC GCACCGCATC TACGGATACC GGGGCCCGGG CGCCGCCGGC GCCGGGGCCG GCCACGACCC GCGGCTCAAC
CCGGAGTTCG CCCGCGCGCT GCAGCGCTCC TGCGCGGGGT ACCGGACCGA CCCCACCGTC TCCATCTTCA ACGACATCGT CACGCCCAGT GAGTTCGACG AGGCATACTA CAAGAACCTG
CCCCACGGGC TGGGCCTGCT CGCCTCCGAC GCCGCCATCT GGGAGTACCC GCCCACCAGG GTGTTCGCGC AGCGGTACTC CGCCAACCGC ACCGCCTTCT TCGAGGACTT CGCCGCCGCC
ATGCAGAGGC TCGGCGCCGT CGGCGTCAAG ACCGGGCGCC AGGGCGTCGT CAGACGCCGC TGCGACGCGC TCGACTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGCGCGC CGCTGCTCCG CCGCCGCCTC CTGCTGTCCC TCGCGCTCCT GGCCGCCTGC TGCGCCGCGG TGGGGACAGC GGCGGCGGCG AAAGCGAAAG CGCCCAGGCT GTCGCCCAAC
TACTACCGCC ACAGCTGCCC GCGGGTGCAG CGGATCGTGT CGGACGTCAT CGCGGCGAAG CAGCGCGCCA ACCCGTCGAC GGCGGCGGGC ACGCTGCGGC TCTTCTTCCA CGACTGCTTC
GTCAACGGCT GCGACGCCTC CGTGCTGGTC TCCCCGCTCT CCTCCACCGC GGCCCCGGAG CGCCGGCGGG AGATCACCCT CTCCCTGCCC GGGGACGCGT TCGACGCCGT GGCCCGCGCC
AAGGCGGCGC TGGAGTCCGC CTGCCCCGGC GTGGTGTCCT GCGCCGACGT CCTGGCGCTG GCGGCGCGGG ACCTCGTGGG GATCCTTGGC GGGCCACGGT TCCCCGTCGC GCTGGGCCGC
CGCGACTCCG CCCGCTCCGA GGCGCGCGAC GTGGAGGGCA ACCTGCCACG CACCAACATG TCGGCGCGCG CCATGGTGCG GCTCTTCGCG GGCAAGGGGC TCTCGGCCCG GGAGATGGTG
GCGCTGGCCG GCGCCCACAC CGTGGGCTTC TCCCACTGCG CCGAGTTCGC GCACCGCATC TACGGATACC GGGGCCCGGG CGCCGCCGGC GCCGGGGCCG GCCACGACCC GCGGCTCAAC
CCGGAGTTCG CCCGCGCGCT GCAGCGCTCC TGCGCGGGGT ACCGGACCGA CCCCACCGTC TCCATCTTCA ACGACATCGT CACGCCCAGT GAGTTCGACG AGGCATACTA CAAGAACCTG
CCCCACGGGC TGGGCCTGCT CGCCTCCGAC GCCGCCATCT GGGAGTACCC GCCCACCAGG GTGTTCGCGC AGCGGTACTC CGCCAACCGC ACCGCCTTCT TCGAGGACTT CGCCGCCGCC
ATGCAGAGGC TCGGCGCCGT CGGCGTCAAG ACCGGGCGCC AGGGCGTCGT CAGACGCCGC TGCGACGCGC TCGACTGA
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Retrieve as FASTA
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