Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
226 |
PWM (Da): |
24848.81 |
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PI (pH):
| 9.39 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
LSLPGDAFDV IVRAKTALEL ACPNTVSCAD ILAVATRDLL TMLGGPYYGV VLGRKDGRVS QSRLIRNRLP LPSMPISQLI DLFASRGFSV QEMVALSGAH TVGFSHCKEF SSRIGNDSHY
NPRFAAGLQK ACAGYPKDPT LSVFNDIMTP NKFDNLYFQN LPKGLGLLES DHGLYGDPRT RELVELYAKD QAKFFQDFAR AMQKLSLYGV KTGRRGEIRR RCDAIN
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Retrieve as FASTA
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Remarks |
Partial sequence from genomic. Incorrect prediction from phytozome (only last exon in supercontig_14 due to undetermined sequence, exons 2 to 4 in contig_45132-contig_45132 (114..794)). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CTATCTCTCC CCGGAGATGC CTTCGACGTT ATCGTCCGAG CCAAGACCGC CCTCGAGCTT GCTTGCCCCA ACACTGTTTC CTGCGCCGAC ATCCTCGCCG TTGCCACCCG TGACCTCCTC
ACAATGCTTG GAGGTCCCTA CTACGGTGTC GTTTTGGGTC GTAAGGACGG CCGCGTCTCC CAGTCCCGTC TCATCCGAAA TAGACTCCCC CTTCCTTCGA TGCCCATTTC CCAACTCATC
GACCTCTTCG CTTCCCGCGG GTTCAGTGTC CAGGAGATGG TAGCTCTGAG CGGCGCCCAC ACCGTCGGGT TCTCGCACTG CAAGGAGTTC AGCTCCCGAA TCGGGAACGA TAGCCATTAC
AACCCGAGAT TCGCGGCCGG ATTGCAGAAA GCCTGTGCTG GTTATCCCAA GGACCCGACC CTATCGGTGT TCAACGATAT AATGACACCC AACAAGTTCG ACAATCTGTA TTTCCAGAAC
CTGCCCAAGG GTCTGGGGCT CTTGGAGTCG GATCACGGGC TTTACGGTGA CCCGAGGACG AGAGAACTCG TGGAATTGTA CGCCAAAGAT CAGGCAAAGT TTTTCCAGGA TTTTGCTCGA
GCGATGCAGA AACTCAGCCT TTATGGAGTG AAGACCGGGA GGAGAGGGGA GATCAGGCGC AGGTGTGACG CCATCAACTA A
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CTATCTCTCC CCGGAGATGC CTTCGACGTT ATCGTCCGAG CCAAGACCGC CCTCGAGCTT GCTTGCCCCA ACACTGTTTC CTGCGCCGAC ATCCTCGCCG TTGCCACCCG TGACCTCCTC
ACAATGCTTG GAGGTCCCTA CTACGGTGTC GTTTTGGGTC GTAAGGACGG CCGCGTCTCC CAGTCCCGTC TCATCCGAAA TAGACTCCCC CTTCCTTCGA TGCCCATTTC CCAACTCATC
GACCTCTTCG CTTCCCGCGG GTTCAGTGTC CAGGAGATGG TAGCTCTGAG CGGCGCCCAC ACCGTCGGGT TCTCGCACTG CAAGGAGTTC AGCTCCCGAA TCGGGAACGA TAGCCATTAC
AACCCGAGAT TCGCGGCCGG ATTGCAGAAA GCCTGTGCTG GTTATCCCAA GGACCCGACC CTATCGGTGT TCAACGATAT AATGACACCC AACAAGTTCG ACAATCTGTA TTTCCAGAAC
CTGCCCAAGG GTCTGGGGCT CTTGGAGTCG GATCACGGGC TTTACGGTGA CCCGAGGACG AGAGAACTCG TGGAATTGTA CGCCAAAGAT CAGGCAAAGT TTTTCCAGGA TTTTGCTCGA
GCGATGCAGA AACTCAGCCT TTATGGAGTG AAGACCGGGA GGAGAGGGGA GATCAGGCGC AGGTGTGACG CCATCAACTA A
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Retrieve as FASTA
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