View Redoxidase 8817

Entry information : CsaPrx28 ( Cucsa.093730)

Entry ID	8817
Creation	2011-06-29 (Qiang Li)
Last sequence changes	2014-02-05 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2016-03-31 (Christophe Dunand)

Peroxidase information: CsaPrx28 ( Cucsa.093730)

Name (synonym)

CsaPrx28 ( Cucsa.093730)

Class

Class III peroxidase [Orthogroup: Prx020]

Taxonomy

Eukaryota Viridiplantae Streptophyta Cucurbitaceae Cucumis

Organism

Cucumis sativus [TaxId: 3659 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	CsaPrx28 start..stop	S start..stop
RcPrx30	514	0	11..327	9..325
PpePrx27	508	0	7..323	3..319
PpePrx25	504	0	7..325	3..319
GmPrx48	504	0	3..323	4..325

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8817' 'join(50825..51034,51129..51320,52761..53342)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	50825..51034	208	N° 2	51129..51320	190	N° 3	52761..53342	580
join(50825..51034,51129..51320,52761..53342)

Literature and cross-references CsaPrx28 ( Cucsa.093730)

DNA ref.	Phytozome 12: scaffold00919 (50825..53352)

Protein sequence: CsaPrx28 ( Cucsa.093730)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	327 (304)
PWM (Da):	36501.16 (31908.6)
PI (pH):	6.05 (4.44)	Peptide Signal:	cut: 28 range:28-331

Sequence
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Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MANTFFPLFLFFLLFHFPSLSPAKLQLNFYSNSCPQAEAIVRSVM
HKAFIREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLSLANINSLRSYEVVDEVKETLEKVCPGIVSCADIIIMASRDAVFLTGGPDWPVELGRLDSLTASQEDSDQIMPSPRANATSLIDLFSKYNLSVKDLVALSG
SHSIGKGRCFSIMFRLYNQSGTGRPDPAIEPRFREELFKRCPHGVDENVTLNLDSTPYVFDNQYFKDLVGGRGLLNSDETLYTFGETRKYVRFFSKNQSAFFDAFVEGMSKMGDLQSGRP
GEVRRNCRVVNGQSVII*

Retrieve as FASTA

Remarks

Complete sequence from genomic (introns 1 and 2).

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ACAAGTTTTT AAACCTAAGT CGTTGCTTGC AAATTGTATC AGAAATTCTC TCAAAACTTT TTGTCATTCT AATGAATTCT CACAAACCAA TCTCAACCTA GAGGATATAA AGGTCTCCGA CGAGTAATGT CTCAAATTTG GTGATTTGTA GATTCAGAGA CGTCGTCAAG AGTAAATTCC TCTATTCTAT AGTTCTCTAA TCTATAATTT GTTTAAACAT ATGTTTAACC TTAGTTAAAA TTATAAGAAA ATTTGTTTAT GCAATTGTTT AACAATTTAC AATAATTTTA AGTTTCAAAT TAAATTAATG TAAGATCTCC CATTGCTTTC GTTTCGTTCC TTCAATAAAA CAAGTACATA GATTAACTTA CTCTATTTAG ACGAACCAAC GCATTCACCA AAACATTACT ACAAGACTAC ATGCATCCCT CCCAACAACT ATCTAACCTC AAGTAACACC CCACTCCAAA ACTCTGAATT CCTCCATCAT TGCTCAAATT CACAATCTCT CCCCCAATAA CACACACACA CACCACATCT CAAAGAAAGA AAGAAAACAA AATCCTTTTG AAAGAAACAA GAAACCACCC AGGCCTAAGC CTTTTTCCAA CAGAAACCCA AATTAGGACC TTCATTCATT GGAGGGAGGA AGAAATTGCC TATTTAAAAG TTTTCTTTAC ACAAACTAAA CCATATGTCA ACATTTGGAA TCATATGTAT CCTAAACTCG TGGTTCCCAC CTTCCATTTC CCTTACAAAA ATATTAACTT AACATTTTAT AATAAAGCTT AATCAATCCC ATAATTACTT TACAATTTTA GAAAAGTAAA TGGAATCTCC ATAATGCCCC CATTCACCAC TCATACTTCG ACACGCGTTC ATTATTAATT TATTTGACAA AAATATTTAG AAAAAAACAG TCAAAGTAAA TATTACCAAA TATGACAAAT AATTAGTAAT ATCAAATGGT TATAAGATTA TAAAAAACTA TCAATTTTTA ATTTGCTACT TTCATAAAAG GAATGAAGCA TTAATGTGTC AAATAGGAAA TAGGAAATAG TTTTATTTAT ATTTTAAATT TCAATTAGTC AATTTATCGT TACTCATTTT CAAACAAATG TCTATGTTTA TTTATTAATT TAGAAGGATT ATGAATGACA ATTTCAAATT TACTTTTAAG TGATGAAATA TAGTGAAATT TAATTTAAAC ATCACTCTAA CTATTTTAAA TTTATTAACC TACGTAAATA CAAAAATAAG TATTTAGTGA AAATTAATAA ATATTTAGTG AAAATTTGAG GTTAAGAACG TAGATATTCA ACCAAATTGA AACAAAATAT AAATGTAAAA ATAAAAGTCT AATATTTTAG TGGAGTTTTT CAAAAAATAT AAAAAAGTAC AACGAGGAAA TAGTAAAAAA TAGTAAATTC GACGAAATAT TTTCCAAAAT TTTGCTATAA CTTATAAATA TTTTAATTTA TTTTACTATT TTAAAAAATG ACCAAACTAT TTACTATGCA ATTTAAATAG ATTGTCCATT GCCATTTTTT TTTTATAATT CATCTATTTT AATTTTATTA AAAACTAAAT TAAAATCAAA ATATGAAAAA GTTGGTAGAA AAGTTGTAAC CTCAATCTTA GGAATTAAAT AAAAGGGACA TTGCAAAAAT AGCAAAAAAA AAAATTTATG ATAATAAAAT TCACTTCATT ACATTTTTAA ATTATAAAAA TAATTTTAAA AGTACATAAA TTTATTTTTA GTCCTCCAAT AGCTCTATAT GCAGGTTCTA ATATTCCTAA TTTTGTCATA GCTAAAGTTG ATGCATGAAA GGAGGCAAGG ACCAAAGAAA TGGCAATTAT TGGCCATCCT TAGCCCATAT AGCCTTTGTC GTCTATAACT TGCCATTGCC ATTGCTATTG
TGCTCTGCTA TAAGAAAGCT TTCCAACCTA AACAACTTTT TTAGTGAATA CTGAATGAAT TCTATTCCCA ACGCGCAACC A

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCAATACCTTCTTCCCTCTCTTCCTCTTCTTCCTCCTCTTCCACTTTCCATCCCTTTCTCCGGCCAAACTCCAGCTCAATTTCTACTCCAACTCATGCCCTCAGGCCGAAGCCATA
GTCCGTTCTGTGATGCACAAAGCTTTCATCAGAGAACCTCGTAGTGTCGCCTCCGTTATGCGTTTCCAGTTTCACGATTGCTTTGTTAATATGTAATTGATCCCCCCAACTGTTCGTTCT
TTTGGATTTTGCTTTTTTTCTTTACCTGTTTGGCTTCTGAATCGGCGTTTCCTTTGTCTAATTCAGGGCTGTGATGCTTCTATGTTGCTAGATGATACGCCGACGATGCTTGGAGAGAAA
CTCTCTCTTGCTAACATTAATTCGCTTAGATCTTACGAAGTCGTTGATGAAGTGAAAGAGACTTTGGAGAAGGTTTGTCCTGGCATTGTTTCTTGTGCAGATATCATAATTATGGCATCC
AGAGACGCTGTCTTTTTGTGGTGAGTACTTCCGTTTCTTCTACCTCTGTTTTTTGTGCTATGAAATTCTTATTGGAGCCTGAGATTTGTTTTTCTTGATGTTTATCTTCTTTGCTTCGTT
TTTCACTCTCAATCCTTCTCCTAAAATCCACAAATCGAAATTCCGAAAACACAAGAAAGAGGAACGAATCAACCAACACTGCCTTTCAATTTAACATTTCAGTTCCATTAATTCCACTTA
ATTGTTTGAAATTTTTGCTACCAAACAACAGTCCAAATTTGAGTGAACTCCATTTTTTAAAACGATTTAATATAGAATTTGAATACTTCGTGATAATCGTTGGATTTTAATTTAAAAAGA
AATATTTAGGATAAGAAGTAGAACATTGAATTGAAAAGTAAGAATTTATAGAATCAGAGAGTATTTCTACCGTATAAGAAAGAGCGGAGTAATGTGTATATATGTATTATAAAAATCGAA
CTATTGTTATATCTTTTACCCTACAACAAAAGAAAGTTGTATGAGACATAGAAAATCAGACCGACATGATGTGACACCATTTTTCAACTTAAAACACACGAGAGAATATTTTTAGCATAT
GATATTTTTTTATCTTCGAAAGAGAGAAATCAACTTTCATGCATGTTTCCTAATTCAGTCGATCTAAGATGGGGTAGAATTATTATTTTCATTTTTAAATTGGGTTCATTTTCTCTTAAT
TCCATGTTCATAGTTTTCTCATTCTTAGTAAAAAATACTCCTAAAATATAGACAATCAAACATCGTCCTAAACAATGGTTGTGAAATGATGTATATAAGCTTAAGTTTAAAAAATCAAAA
TTCAAAGAGTTACCAAATGAGGTGTAAGTGATGAGAAAAGTATCACAACTATTTGTATGGTTCATAAGTTGTTTGAAAAGAGTTAAGTGGGATTGATACCTTGTACTGAATTAGTAAGGT
ACCCAATAATAATAGTAGCTTGTTAATAAAGCAGAGTTGGACAGTAACCCTTGCATAAGCAAGTAACTTCCAATGGTTTAAAAGCTCCACCAACAATCCTGCCAAAAATTCATAACAAAC
TGGTCCATCCCCATCCTCCCACCCCAACTACTTTTCCAAATGTCATCCTCTTGCTCATTTTGTCAAGAATTCACGTCCAAAGAAATCAAAATATAACCACTTTTATTATTGATTGTTTTT
AACCCTATCGAATCTAAATTCATTAAGCTAAAATAAACATAACTCAATCGATTCACATTTGAATTATCAACTTAGAATGTTCGATCTTTCACTTATATGTCATAAACAAGAAAGAAATAA
ATTCATTAAGTCTGAAGGAATATATTCAATCTGAAAACAAAAATAAGATAATAGGATGAAGTTATGAGCTATTTCTCTAATTTATAATTAATTTTGAGATGAAATTCACATTTTTATGAA
CATAACTTGTATTTATTCAGACAGGCGGCCCTGATTGGCCAGTAGAACTGGGACGGCTGGACAGTTTAACAGCAAGCCAAGAGGACTCGGACCAAATCATGCCAAGTCCAAGAGCCAATG
CAACTTCTCTCATTGACCTTTTCAGCAAATACAACCTCTCCGTCAAAGATTTGGTAGCTCTTTCAGGTTCGCACTCAATTGGCAAAGGCCGATGTTTCTCCATCATGTTTCGACTCTACA
ACCAATCCGGCACAGGACGACCAGACCCAGCAATCGAGCCTAGGTTCAGAGAAGAGCTCTTCAAGCGATGCCCTCATGGCGTGGATGAAAATGTGACACTCAACCTTGATTCCACACCTT
ACGTTTTTGACAATCAGTACTTCAAGGACTTGGTTGGTGGGAGGGGTTTGTTGAATTCTGATGAAACTCTTTACACATTCGGTGAAACTAGAAAGTACGTGAGGTTCTTTAGCAAAAATC
AAAGTGCATTTTTTGATGCATTTGTGGAAGGTATGTCGAAGATGGGCGACTTGCAATCTGGCCGGCCGGGGGAAGTGAGAAGGAACTGTCGGGTAGTGAATGGCCAATCTGTGATCATAT
AA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA