View Redoxidase 8826

Entry information : CsaPrx39 (Cucsa.128470.1)

Entry ID	8826
Creation	2011-06-29 (Qiang Li)
Last sequence changes	2012-01-04 (Qiang Li)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2015-10-15 (Christophe Dunand)

Peroxidase information: CsaPrx39 (Cucsa.128470.1)

Name (synonym)

CsaPrx39 (Cucsa.128470.1)

Class

Class III peroxidase [Orthogroup: Prx018]

Taxonomy

Eukaryota Viridiplantae Streptophyta Cucurbitaceae Cucumis

Organism

Cucumis sativus [TaxId: 3659 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	CsaPrx39 start..stop	S start..stop
CsaPrx37	486	2.99e-174	3..338	2..337
CsaPrx38	451	9.18e-161	11..338	14..339
GmPrx332	443	1.25e-157	11..338	10..324
GmPrx192	443	1.25e-157	11..338	10..324

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	487913..488146	232	N° 2	488399..488597	197	N° 3	489017..489597	579
join(487913..488146,488399..488597,489017..489597)

Literature and cross-references CsaPrx39 (Cucsa.128470.1)

DNA ref.	Phytozome 12: scaffold01024 (487913..489597)

Protein sequence: CsaPrx39 (Cucsa.128470.1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	338 (145)
PWM (Da):	36430.6 (15650.8)	Transmb domain:	i9-31o
PI (pH):	9.69 (5.10)	Peptide Signal:	cut: 22 range:22-166

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASSSSQKFNILSKLSTVIFFLYLSTFASAATLKVGFYRSSCPNA
EAIVKKVVNKAISLNPGAAAGLIRLHFHDCFIRGCEGSVLLKSTPGHPTERDHPSNFPSLQGFEIIDEAKAYLESACPNTVSCADILAFAARDSARKVGGINYAVPAGRRDGRISIKEEASRLPSPTFNIEQLTQNFAERGLSKTDMVTLSGA
HSIGAARCLTFSNRLYSFNATHNQDPSMNPKYAAYLKTKCPPLTSNVGGQNAQPLEAALDFTTPNRLDNQYYIGLTKHQGLLSSDQILLSSPSTSKLALVYAKYGSIWASNFKKSMVKMG
SIGVLTGSQGEIRRQCSFV

Retrieve as FASTA

Remarks

Complete sequence from genomic (introns 1 and 2).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTTCTTCTTCTTCTCAAAAGTTCAATATTCTTTCAAAGCTTTCAACCGTTATCTTCTTCCTCTATCTCTCCACTTTTGCTTCTGCTGCAACCCTAAAAGTTGGTTTTTATCGTTCA
TCTTGTCCCAATGCTGAGGCTATCGTTAAGAAAGTTGTAAACAAAGCCATCTCTCTGAACCCCGGTGCGGCGGCCGGCCTCATTCGATTGCACTTCCATGATTGTTTTATTAGGGGGTAT
GTCTCAAAGTTTCCTTAAAACACTTTAGTACTTAAAAGATAAAAAAGATTGTCCGCATTTTGAGTTGCATTCAATTGCATTGTTACACAGTTAGTCGCATGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGCCGTGTTGATGAAGTGGAATGCAAAGAGAGATGTAGGTATAGTTCAGAATGTATTAAAGTATTTTTCACTTGGGTTGATTTCTAAGTCTCTCTTTCTTCACATTTA
AATTTAAGGGTTGTGAAGGTTCTGTGCTGTTGAAATCCACTCCTGGACATCCAACTGAGAGAGATCATCCTTCAAACTTTCCAAGTTTACAAGGTTTCGAGATTATTGATGAAGCCAAGG
CCTATCTTGAGTCTGCTTGTCCCAACACTGTCTCTTGCGCTGACATCCTTGCCTTTGCTGCTCGTGATAGCGCTCGTAAAGTTGGAGAGGTATATCATCATCATTTGATAATTAATCATC
TTCTTTATTGGATTTTAGTTTTTAAAAATTGTGATTAGCACACGAATGTAATTTTTTAACAANNNNNNNNNNNNNNNNNNNNNNCTCGCAAGAAAGTTAATAAAAGAAAAAAAGGAAAAT
GATAGATGAGAGAGCATAGGGTTGATGAGCTTAATTTTAAAATTTTATGAACCAAATCTGATTATGGCCTTCGTGATCTTTAAATTTATCTATCTTTTAGTTAATATTTTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTAAATTACTGTCCGCAGGAATTAATTATGCAGTACCAGCTGGTCGTCGTGATGGACGCATCTCAATAAAAGAAGAGGCCAGTCGTCTTCCTTCTCCCACCTTCAACATT
GAACAACTCACCCAAAATTTTGCTGAGCGAGGGCTATCGAAGACAGATATGGTAACTCTTTCTGGCGCCCACTCGATCGGAGCAGCTCGATGCCTCACCTTCTCCAATAGGCTTTATTCC
TTCAACGCAACCCACAATCAAGACCCTTCCATGAACCCAAAATACGCAGCTTACTTGAAGACCAAATGCCCACCACTAACTAGCAACGTTGGAGGCCAAAATGCTCAGCCGCTCGAGGCG
GCCCTTGACTTTACGACCCCGAATCGTCTAGATAACCAATACTACATCGGCTTGACTAAGCATCAAGGACTATTGAGCTCTGATCAAATATTGTTGAGTAGCCCTTCCACATCAAAATTA
GCGTTGGTTTATGCAAAGTATGGCTCGATATGGGCCTCCAATTTTAAGAAGTCTATGGTTAAAATGGGTTCCATTGGTGTCCTCACTGGATCACAAGGCGAGATTAGGCGTCAGTGCAGC
TTTGTGAAT

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA