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Entry information : CsaPrx61 ( Cucsa.170030.1)
Entry ID 8839
Creation 2011-06-29 (Qiang Li)
Last sequence changes 2016-01-27 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-01-27 (Achraf Jemmat)
Peroxidase information: CsaPrx61 ( Cucsa.170030.1)
Name (synonym) CsaPrx61 ( Cucsa.170030.1)
Class Class III peroxidase    [Orthogroup: Prx028]
Taxonomy Eukaryota Viridiplantae Streptophyta Cucurbitaceae Cucumis
Organism Cucumis sativus    [TaxId: 3659 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsaPrx61
start..stop		 S start..stop
RcPrx53 459 1.84e-164 15..324 14..315
GmPrx65 454 3.83e-162 2..325 12..329
MtPrx19 453 8.49e-162 5..325 14..328
GrPrx39 452 2.32e-161 4..325 10..324
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 308861..309085 223 N° 2 310106..310294 187 N° 3 310445..310607 161 N° 4 310708..311105 396
join(308861..309085,310106..310294,310445..310607,310708..311105)


exon

Literature and cross-references CsaPrx61 ( Cucsa.170030.1)
DNA ref. Phytozome 12:   scaffold01174 (308861..311123)
Protein sequence: CsaPrx61 ( Cucsa.170030.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (294)
PWM (Da):   %s   35719.79 (32372.0) Transmb domain:   %s   i12-34o
PI (pH):   %s   7.66 (6.50) Peptide Signal:   %s   cut: 30 range:30-323
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MIPTMSKWMSLVSIMLLVGVSLRFRSVNGLNMGYYLMSCPFVDPIVKNTVNRALQNDPTLAASLIRMHFHDCFVEGCDGSILIDSTRDNTAEKDSPANLSLRGYEVIDEIKEQLERECPG
VVSCADVIAMAARDAVFWDVNT*QAGGPFYEIPKGRKDGSRSRIEDTVNLPSPFLNASQLINTFAQRGFTPQHCAFYIGAHTLGVARCISFKGRLDGNDPLLSPNFGRALSRTCSNGDNA
LQTFDATPDSFDNVYYNAVSRGAGVLFSDQTLFASPRTRGIVTAYAMNQALFFLDFQQAIIKMGLLDVKEGYRGQVRRNCRRVN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATACCAACAATGTCAAAATGGATGAGTTTAGTAAGCATCATGTTGTTGGTGGGAGTGAGTTTAAGGTTTAGAAGTGTAAATGGGTTGAATATGGGATATTACTTGATGAGTTGTCCC
TTTGTTGATCCTATTGTCAAGAACACGGTCAACCGAGCTCTTCAAAATGATCCCACTCTAGCTGCTTCTCTTATCCGAATGCATTTTCATGATTGTTTCGTTGAGAGGTAGTCAAACTTT
AATTTAAATATATGTTTTACTTTTTCTTTCTCTTTTTTTTCTTTATGATCCATGCTTAAAATATTGATGTTAATATCGTTATTGAGTACTAAGTTTATAGCTATATATCAAAGGATAAGA
TATATATATATATATAGCAAAATTCTATCAAATTTTCAAAAGTAACATATTTGACAAAATATCAATCAAAATCTTTTTAATGAAAAATATCAATTTATTATTTTGCATTTTGTACAATGT
ATCAATCAAAATCTTAAACCTTCTTAAGTGTATATCAATTTAGCACGTACCATCCAAATCATATTGTTTGAAGAATATATTTTACGAGATAAATTAATTTTTTGAATTAAATTCTTAAAT
TATCATAAACGAATCACTATTTAGATATTTTAATTATATTAAGCTTTTCGTTGTGAGTGGATATATTTTTACGCATTCATTTTAATTAACATGAATGTGTTGTTTAAAGAGACCTATTCC
AAACATAACAAAAACCACTATTTCTATCTAAGTGTTCTCAGAAGAACCTTTTTTCAAAATATTTTTCAAAAAGTGTGTCCTACTCATCCAATTAACCCTACAATAATTATAGATGTTAGT
TGATATGGAGAAATGAGATATATTGAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTATATATATATATGCATGTGTAGGGATGCGATGGGTCAATATTGATTGATTCAACAAGAGACAACACAGCAGAAAAGGACTCTCCTGCTAACCTTA
GCTTACGAGGGTATGAGGTTATTGATGAGATTAAAGAGCAACTTGAACGCGAATGTCCTGGTGTTGTTTCTTGTGCCGACGTTATCGCTATGGCAGCCAGAGATGCAGTCTTTTGGGGGT
ATTTTTCTTAACATTTTCTAACTCAATCTTGCGGATTTTATATAAGACATACATGCGTACATATATATGTATATGTGATAATTTATATAATCTTCATTTATGGATTATTATTGTTTTTTT
GAAAATAATTATAATTAAAAAAAATAATGATGTGAACACATAACAGGCAGGAGGTCCATTTTACGAGATACCGAAAGGAAGGAAGGACGGAAGCAGATCAAGAATCGAAGACACTGTTAA
CTTACCTTCTCCTTTCTTAAATGCTTCTCAGCTAATTAATACTTTTGCTCAACGTGGCTTTACTCCTCAACACAAATGGTTGCACTTTCCGGTAAGTAGATTAAATATACGAAACAATTT
AGTTCTAAATTGACAGTTTAATTAGCATCTAAACACTTACAAGGACAGTCCATATTGTGCTTTTTATATAGGAGCACATACATTGGGAGTGGCAAGATGCATATCATTCAAAGGGAGACT
TGACGGCAACGACCCTCTTCTAAGTCCAAACTTTGGAAGAGCATTGTCAAGAACATGCAGCAATGGAGACAATGCGCTACAAACATTTGATGCCACACCTGACAGCTTCGACAACGTCTA
TTACAATGCGGTGTCGAGAGGCGCTGGAGTTTTGTTTTCGGACCAGACATTGTTCGCTAGCCCTCGTACGAGAGGCATTGTCACAGCCTATGCCATGAACCAAGCCCTGTTCTTCTTGGA
CTTTCAACAAGCCATCATAAAAATGGGGTTACTTGATGTGAAGGAAGGTTATAGAGGCCAAGTTCGTCGCAATTGCCGTAGAGTTAATTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATACCAACAATGTCAAAATGGATGAGTTTAGTAAGCATCATGTTGTTGGTGGGAGTGAGTTTAAGGTTTAGAAGTGTAAATGGGTTGAATATGGGATATTACTTGATGAGTTGTCCC
TTTGTTGATCCTATTGTCAAGAACACGGTCAACCGAGCTCTTCAAAATGATCCCACTCTAGCTGCTTCTCTTATCCGAATGCATTTTCATGATTGTTTCGTTGAGGGATGCGATGGGTCA
ATATTGATTGATTCAACAAGAGACAACACAGCAGAAAAGGACTCTCCTGCTAACCTTAGCTTACGAGGGTATGAGGTTATTGATGAGATTAAAGAGCAACTTGAACGCGAATGTCCTGGT
GTTGTTTCTTGTGCCGACGTTATCGCTATGGCAGCCAGAGATGCAGTCTTTTGGGATGTGAACACATAACAGGCAGGAGGTCCATTTTACGAGATACCGAAAGGAAGGAAGGACGGAAGC
AGATCAAGAATCGAAGACACTGTTAACTTACCTTCTCCTTTCTTAAATGCTTCTCAGCTAATTAATACTTTTGCTCAACGTGGCTTTACTCCTCAACATTGTGCTTTTTATATAGGAGCA
CATACATTGGGAGTGGCAAGATGCATATCATTCAAAGGGAGACTTGACGGCAACGACCCTCTTCTAAGTCCAAACTTTGGAAGAGCATTGTCAAGAACATGCAGCAATGGAGACAATGCG
CTACAAACATTTGATGCCACACCTGACAGCTTCGACAACGTCTATTACAATGCGGTGTCGAGAGGCGCTGGAGTTTTGTTTTCGGACCAGACATTGTTCGCTAGCCCTCGTACGAGAGGC
ATTGTCACAGCCTATGCCATGAACCAAGCCCTGTTCTTCTTGGACTTTCAACAAGCCATCATAAAAATGGGGTTACTTGATGTGAAGGAAGGTTATAGAGGCCAAGTTCGTCGCAATTGC
CGTAGAGTTAATTAA

Retrieve as FASTA