Entry information : CsPrx38 (orange1.1g039892m/Cs6g20170)
Entry ID 8871
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2011-12-05 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2017-12-14 (Qiang Li)
Peroxidase information: CsPrx38 (orange1.1g039892m/Cs6g20170)
Name (synonym) CsPrx38 (orange1.1g039892m/Cs6g20170)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus sinensis    [TaxId: 2711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsPrx38
start..stop
S start..stop
CclPrx36 616 0 1..306 1..306
PpePrx18 478 2e-171 23..306 22..305
RcPrx41 476 9e-171 1..321 1..318
GhPrx27 475 4e-170 4..306 10..305
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 541021..542049 1029  
complement(join(541021..542049))


exon

Literature and cross-references CsPrx38 (orange1.1g039892m/Cs6g20170)
DNA ref. Citrus sinensis Annotation Project:   chr6 (19763010..19764403) Phytozome 12:   scaffold00015 (542049..541021)
Protein sequence: CsPrx38 (orange1.1g039892m/Cs6g20170)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   343 (319)
PWM (Da):   %s   38574.33 (35891.0)  
PI (pH):   %s   6.65 (6.66) Peptide Signal:   %s   cut: 25 range:25-343
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTKPQQALCI LIFSFSFLAN LTESRLSIDY YSKSCPRFSQ IMQDTITNKQ ITSPTTAAAT LRLFFHDCLL NGCDSSILIT STPFNKAERD ADINLSLPGD AFDVITRAKT ALELQCPNTV  SCSDILAVAT RDLVTMVGGP YYNVYLGRKD VRVSKAADVE GNLPKPTMPM SQIIDVFAKR KFSVQEMVAL SGAHTIGFSH CNEFSGNIYN YSRIPYYDAH YNPRFAEALQ KACADYQKNP 
TLSVFNDIMS PNKFDNLYYQ NLPKGLGLLE SDHGLFNDPR TKPYVELYAR DQNEFFKALL ELWRSLVFMV LRPEEEERLG AGVMLLTESI KKYSSLWSCF SLL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACAAAAC CTCAGCAAGC TCTCTGCATT CTCATCTTCT CATTCTCATT TCTTGCAAAC CTCACAGAAT CTAGACTCAG CATCGACTAC TACTCAAAAT CATGCCCAAG ATTCAGCCAA  ATCATGCAAG ATACAATCAC CAACAAGCAA ATCACAAGCC CCACCACCGC CGCCGCCACC CTCCGCCTCT TCTTCCACGA CTGTCTCCTC AACGGCTGCG ACTCCTCCAT CCTCATAACC  TCAACCCCCT TCAACAAGGC CGAGCGTGAT GCTGACATCA ATCTCTCCCT CCCCGGCGAC GCATTTGACG TCATCACCCG TGCGAAGACA GCCCTTGAGC TTCAGTGTCC CAACACTGTC  TCCTGCTCCG ACATCCTCGC CGTTGCCACT CGTGATCTGG TCACAATGGT GGGTGGCCCG TATTACAATG TCTATTTGGG CCGTAAAGAT GTGAGGGTCT CAAAAGCCGC TGATGTTGAA  GGGAACCTTC CAAAGCCAAC CATGCCCATG TCACAGATTA TTGATGTATT TGCAAAAAGA AAATTTTCAG TTCAAGAAAT GGTGGCTCTG AGTGGTGCTC ACACTATTGG ATTCTCTCAT  TGCAACGAAT TTAGTGGTAA TATTTATAAT TACAGCAGGA TACCTTATTA TGATGCTCAT TATAATCCAA GATTTGCCGA GGCTTTGCAG AAGGCTTGCG CTGATTATCA AAAGAACCCT  ACTTTGTCTG TGTTCAATGA TATTATGAGT CCCAACAAGT TTGATAACTT GTACTATCAA AATCTGCCTA AAGGGTTGGG GCTTTTGGAG TCAGATCATG GGTTGTTTAA TGATCCAAGA  ACAAAGCCTT ATGTGGAGCT TTATGCGAGA GATCAAAATG AGTTCTTTAA GGCTTTGCTA GAGCTATGGA GAAGCTTAGT CTTTATGGTA TTAAGACCGG AAGAAGAGGA GAGGTTAGGC 
GCAGGTGTGA TGCTTTTAAC TGAAAGCATT AAAAAATATT CGAGCTTGTG GAGTTGTTTT TCATTGTTG 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACAAAAC CTCAGCAAGC TCTCTGCATT CTCATCTTCT CATTCTCATT TCTTGCAAAC CTCACAGAAT CTAGACTCAG CATCGACTAC TACTCAAAAT CATGCCCAAG ATTCAGCCAA  ATCATGCAAG ATACAATCAC CAACAAGCAA ATCACAAGCC CCACCACCGC CGCCGCCACC CTCCGCCTCT TCTTCCACGA CTGTCTCCTC AACGGCTGCG ACTCCTCCAT CCTCATAACC  TCAACCCCCT TCAACAAGGC CGAGCGTGAT GCTGACATCA ATCTCTCCCT CCCCGGCGAC GCATTTGACG TCATCACCCG TGCGAAGACA GCCCTTGAGC TTCAGTGTCC CAACACTGTC  TCCTGCTCCG ACATCCTCGC CGTTGCCACT CGTGATCTGG TCACAATGGT GGGTGGCCCG TATTACAATG TCTATTTGGG CCGTAAAGAT GTGAGGGTCT CAAAAGCCGC TGATGTTGAA  GGGAACCTTC CAAAGCCAAC CATGCCCATG TCACAGATTA TTGATGTATT TGCAAAAAGA AAATTTTCAG TTCAAGAAAT GGTGGCTCTG AGTGGTGCTC ACACTATTGG ATTCTCTCAT  TGCAACGAAT TTAGTGGTAA TATTTATAAT TACAGCAGGA TACCTTATTA TGATGCTCAT TATAATCCAA GATTTGCCGA GGCTTTGCAG AAGGCTTGCG CTGATTATCA AAAGAACCCT  ACTTTGTCTG TGTTCAATGA TATTATGAGT CCCAACAAGT TTGATAACTT GTACTATCAA AATCTGCCTA AAGGGTTGGG GCTTTTGGAG TCAGATCATG GGTTGTTTAA TGATCCAAGA  ACAAAGCCTT ATGTGGAGCT TTATGCGAGA GATCAAAATG AGTTCTTTAA GGCTTTGCTA GAGCTATGGA GAAGCTTAGT CTTTATGGTA TTAAGACCGG AAGAAGAGGA GAGGTTAGGC 
GCAGGTGTGA TGCTTTTAAC TGAAAGCATT AAAAAATATT CGAGCTTGTG GAGTTGTTTT TCATTGTTG 

Retrieve as FASTA