Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
364 |
PWM (Da): |
40215.18 |
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PI (pH):
| 4.97 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MRIVISFSISFENRNADTKKALNINSTSNFLHYVCYEYPASDPSLFRIAAGAGALFLSNGGKIEEGDCGEPYDSLQYDFNRDSCPQAEGRIRAMVWYLRKSRSGVAPAFLRLVFRDCSIEGCDSSVLLDEADGVDSEKMSLPSESLNRFYVINIIKEDLEEICPGVVSYSDTLPLAAREGVVLAGGPFYPLHTGRRDSRLALADIATFELPLPNADLPETLASFASRGFDLRETVTFLDAHGIGVIHCIFFKSHLCNLGRINESLDPGFLNLLRSKCRNVHSGSAVAAPFNPLYIGSRDSMQMLTFAVIATNAGLSTFELREMSSLCRRMYLSFLSILCIIQSDYDSVVQLIIYSMYLTLQKL* |
Retrieve as FASTA
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Remarks |
Partial sequence from genomic. Incorrect prediction from phytozome (Both 5' end and 3' end are missing due to 'NNNNN' in DNA). Bad annotation in CAP. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCGAATAGTGATCAGCTTCTCGATCTCTTTCGAGAACCGAAACGCCGATACCAAGAAAGCCTTGAACATCAACTCCACCAGTAATTTCTTGCATTATGTTTGTTACGAGTATCCAGCG TCGGATCCTTCTCTCTTTCGGATAGCCGCCGGCGCTGGGGCCCTGTTCTTGTCCAATGGCGGGAAAATTGAAGAAGGCGACTGTGGCGAGCCTTATGATTCTTTGCAGTACGATTTCAAC CGCGATTCGTGCCCACAAGCTGAGGGCCGTATTCGGGCCATGGTTTGGTATCTCCGAAAATCACGCTCCGGTGTAGCTCCTGCTTTCTTGCGCCTCGTTTTCCGGGATTGCTCCATTGAG GTCCATTTTTATTCAGTCAACTTCAGTCAAATATTATTTTGTGTGTGTGTGTGTGTTTTTTTTTTTTTTTTTTATATATATTCTGATTTTTGTTAAATCTTGAATTTCTTTTTACTTCTT GCTATTTCTAGTTATTTCATCCACTGATATACTCTCCAAACAATCTTGTTTATTCCGCTAATTTTTCACTAGGGTTATCTGATTTATTCACATTTTGATCTGGGTTAAGCAATTATTTTA TGTGCAATTTTGTTAATTGGGTTCTTGCTATTTCAATCAGATTAATTTTGAGTTGAGTTTTCTGTAATTTGGAACTTGTTTAGGGTTGTGATTCTTCAGTTCTACTGGATGAAGCTGATG GAGTAGACTCAGAGAAAATGTCTCTTCCCAGTGAATCTCTCAATCGTTTCTATGTAATCAATATAATCAAAGAGGATCTCGAAGAAATTTGCCCTGGTGTGGTTTCTTATTCGGATACTC TTCCTTTGGCTGCCAGAGAAGGTGTTGTTCTGGTAAATTCCTGTATCATGTGACCATCCAAATCTATGAAATCTGGCTTTCTATCTATGTTTGTACAATCTGTATAGATAATCATTGTGT CTTTGAATTTAGGCTGGTGGTCCATTCTATCCACTGCATACTGGCAGGAGAGACAGCAGGCTTGCTCTTGCAGATATAGCAACATTTGAGCTTCCTTTACCCAATGCTGATCTGCCTGAA ACCCTTGCATCTTTTGCATCAAGGGGGTTTGATTTAAGAGAAACTGTTACATTTTTGGGTAGAGAGAAATCCTTATTTCATTTCATGTTCCTTTTTATTTTCATGGAAAAGAGAAATTTC TGATTTTGGTTTGTATTTAATTGCTGCTGCAACTTTTTGCAATTTCCCCGTTCCAGCTGGTTGTCTGATAGTTTAGTTCTGATCTCTTTGGTTCAAAATTTGATACTTGAGCTTAGGAGA TTTCTTAAGATTTCTAACCTTGTTATGGTTCAGTTTTGTGATAATAACAAGTACTGTTAGTCTGTGATTTTGTTCCCAGATGCTCATGGCATTGGAGTCATCCACTGCATATTCTTCAAG AGTCATCTCTGTAACTTGGGGAGGATTAATGAATCTCTGGATCCCGGTTTTTTGAATCTGTTGAGATCAAAATGCAGAAACGTGCATTCAGGGAGTGCTGTTCTGGTAAATTGCAGACTA CGTACCCAAATTTTATAAATCAGGCTCACTCTTACCTGTGTAAAACCATTGTTTCTTTTGTCTCTTTGAATTTTAGGCTGCTCCATTCAATCCACTCTATATCGGAAGCAGAGACAGTAT GCAAATGCTTACTTTTGCTGTTATTGCAACGAATGCTGGTCTGTCCACATTCGAATTAAGAGAAATGTCTTCCCTCTGCAGGCGTATGTATTTATCTTTTCTTTCCATTTTATGCATTAT TCAATCAGATTATGATAGTGTAGTTCAACTAATCATTTATTCAATGTATTTAACCTTACAGAAGCTCTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCGAATAGTGATCAGCTTCTCGATCTCTTTCGAGAACCGAAACGCCGATACCAAGAAAGCCTTGAACATCAACTCCACCAGTAATTTCTTGCATTATGTTTGTTACGAGTATCCAGCG TCGGATCCTTCTCTCTTTCGGATAGCCGCCGGCGCTGGGGCCCTGTTCTTGTCCAATGGCGGGAAAATTGAAGAAGGCGACTGTGGCGAGCCTTATGATTCTTTGCAGTACGATTTCAAC CGCGATTCGTGCCCACAAGCTGAGGGCCGTATTCGGGCCATGGTTTGGTATCTCCGAAAATCACGCTCCGGTGTAGCTCCTGCTTTCTTGCGCCTCGTTTTCCGGGATTGCTCCATTGAG GGTTGTGATTCTTCAGTTCTACTGGATGAAGCTGATGGAGTAGACTCAGAGAAAATGTCTCTTCCCAGTGAATCTCTCAATCGTTTCTATGTAATCAATATAATCAAAGAGGATCTCGAA GAAATTTGCCCTGGTGTGGTTTCTTATTCGGATACTCTTCCTTTGGCTGCCAGAGAAGGTGTTGTTCTGGCTGGTGGTCCATTCTATCCACTGCATACTGGCAGGAGAGACAGCAGGCTT GCTCTTGCAGATATAGCAACATTTGAGCTTCCTTTACCCAATGCTGATCTGCCTGAAACCCTTGCATCTTTTGCATCAAGGGGGTTTGATTTAAGAGAAACTGTTACATTTTTGGATGCT CATGGCATTGGAGTCATCCACTGCATATTCTTCAAGAGTCATCTCTGTAACTTGGGGAGGATTAATGAATCTCTGGATCCCGGTTTTTTGAATCTGTTGAGATCAAAATGCAGAAACGTG CATTCAGGGAGTGCTGTTCTGGCTGCTCCATTCAATCCACTCTATATCGGAAGCAGAGACAGTATGCAAATGCTTACTTTTGCTGTTATTGCAACGAATGCTGGTCTGTCCACATTCGAA TTAAGAGAAATGTCTTCCCTCTGCAGGCGTATGTATTTATCTTTTCTTTCCATTTTATGCATTATTCAATCAGATTATGATAGTGTAGTTCAACTAATCATTTATTCAATGTATTTAACC TTACAGAAGCTCTGA |
Retrieve as FASTA
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