The peroxidases and oxidases database
Entry information : CsPrx01 (orange1.1g043399m/Cs1g12340, 50, 60)
Entry ID 8882
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2017-12-13 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-12-13 (Qiang Li)
Peroxidase information: CsPrx01 (orange1.1g043399m/Cs1g12340, 50, 60)
Name (synonyms) CsPrx01 (orange1.1g043399m/Cs1g12340, 50, 60)
Class Class III peroxidase     [Orthogroup: Prx026]*
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus sinensis    [TaxId: 2711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsPrx01
start..stop		 S start..stop
CclPrx10 572 0 1..287 1..287
CsPrx02 391 8e-136 9..316 16..320
CclPrx09 389 1e-133 9..280 16..286
PtPrx19 266 1e-87 74..285 15..229
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..360 360 N° 2 684..872 189 N° 3 973..1138 166 N° 4 1400..1545 146
N° 5 1637..1870 234  
join(1..360,684..872,973..1138,1400..1545,1637..1870)


exon

Literature and cross-references CsPrx01 (orange1.1g043399m/Cs1g12340, 50, 60)
DNA ref. Citrus sinensis Annotation Project:   chr1 (15375260..15377129) Phytozome 12:   scaffold00266 (81035..82419)
Protein sequence: CsPrx01 (orange1.1g043399m/Cs1g12340, 50, 60)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   364
PWM (Da):   %s   40215.18  
PI (pH):   %s   4.97
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRIVISFSISFENRNADTKKALNINSTSNFLHYVCYEYPASDPSLFRIAAGAGALFLSNGGKIEEGDCGEPYDSLQYDFNRDSCPQAEGRIRAMVWYLRKSRSGVAPAFLRLVFRDCSIEGCDSSVLLDEADGVDSEKMSLPSESLNRFYVINIIKEDLEEICPGVVSYSDTLPLAAREGVVLAGGPFYPLHTGRRDSRLALADIATFELPLPNADLPETLASFASRGFDLRETVTFLDAHGIGVIHCIFFKSHLCNLGRINESLDPGFLNLLRSKCRNVHSGSAVAAPFNPLYIGSRDSMQMLTFAVIATNAGLSTFELREMSSLCRRMYLSFLSILCIIQSDYDSVVQLIIYSMYLTLQKL*

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (Both 5' end and 3' end are missing due to 'NNNNN' in DNA). Bad annotation in CAP.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGAATAGTGATCAGCTTCTCGATCTCTTTCGAGAACCGAAACGCCGATACCAAGAAAGCCTTGAACATCAACTCCACCAGTAATTTCTTGCATTATGTTTGTTACGAGTATCCAGCG
TCGGATCCTTCTCTCTTTCGGATAGCCGCCGGCGCTGGGGCCCTGTTCTTGTCCAATGGCGGGAAAATTGAAGAAGGCGACTGTGGCGAGCCTTATGATTCTTTGCAGTACGATTTCAAC
CGCGATTCGTGCCCACAAGCTGAGGGCCGTATTCGGGCCATGGTTTGGTATCTCCGAAAATCACGCTCCGGTGTAGCTCCTGCTTTCTTGCGCCTCGTTTTCCGGGATTGCTCCATTGAG
GTCCATTTTTATTCAGTCAACTTCAGTCAAATATTATTTTGTGTGTGTGTGTGTGTTTTTTTTTTTTTTTTTTATATATATTCTGATTTTTGTTAAATCTTGAATTTCTTTTTACTTCTT
GCTATTTCTAGTTATTTCATCCACTGATATACTCTCCAAACAATCTTGTTTATTCCGCTAATTTTTCACTAGGGTTATCTGATTTATTCACATTTTGATCTGGGTTAAGCAATTATTTTA
TGTGCAATTTTGTTAATTGGGTTCTTGCTATTTCAATCAGATTAATTTTGAGTTGAGTTTTCTGTAATTTGGAACTTGTTTAGGGTTGTGATTCTTCAGTTCTACTGGATGAAGCTGATG
GAGTAGACTCAGAGAAAATGTCTCTTCCCAGTGAATCTCTCAATCGTTTCTATGTAATCAATATAATCAAAGAGGATCTCGAAGAAATTTGCCCTGGTGTGGTTTCTTATTCGGATACTC
TTCCTTTGGCTGCCAGAGAAGGTGTTGTTCTGGTAAATTCCTGTATCATGTGACCATCCAAATCTATGAAATCTGGCTTTCTATCTATGTTTGTACAATCTGTATAGATAATCATTGTGT
CTTTGAATTTAGGCTGGTGGTCCATTCTATCCACTGCATACTGGCAGGAGAGACAGCAGGCTTGCTCTTGCAGATATAGCAACATTTGAGCTTCCTTTACCCAATGCTGATCTGCCTGAA
ACCCTTGCATCTTTTGCATCAAGGGGGTTTGATTTAAGAGAAACTGTTACATTTTTGGGTAGAGAGAAATCCTTATTTCATTTCATGTTCCTTTTTATTTTCATGGAAAAGAGAAATTTC
TGATTTTGGTTTGTATTTAATTGCTGCTGCAACTTTTTGCAATTTCCCCGTTCCAGCTGGTTGTCTGATAGTTTAGTTCTGATCTCTTTGGTTCAAAATTTGATACTTGAGCTTAGGAGA
TTTCTTAAGATTTCTAACCTTGTTATGGTTCAGTTTTGTGATAATAACAAGTACTGTTAGTCTGTGATTTTGTTCCCAGATGCTCATGGCATTGGAGTCATCCACTGCATATTCTTCAAG
AGTCATCTCTGTAACTTGGGGAGGATTAATGAATCTCTGGATCCCGGTTTTTTGAATCTGTTGAGATCAAAATGCAGAAACGTGCATTCAGGGAGTGCTGTTCTGGTAAATTGCAGACTA
CGTACCCAAATTTTATAAATCAGGCTCACTCTTACCTGTGTAAAACCATTGTTTCTTTTGTCTCTTTGAATTTTAGGCTGCTCCATTCAATCCACTCTATATCGGAAGCAGAGACAGTAT
GCAAATGCTTACTTTTGCTGTTATTGCAACGAATGCTGGTCTGTCCACATTCGAATTAAGAGAAATGTCTTCCCTCTGCAGGCGTATGTATTTATCTTTTCTTTCCATTTTATGCATTAT
TCAATCAGATTATGATAGTGTAGTTCAACTAATCATTTATTCAATGTATTTAACCTTACAGAAGCTCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGAATAGTGATCAGCTTCTCGATCTCTTTCGAGAACCGAAACGCCGATACCAAGAAAGCCTTGAACATCAACTCCACCAGTAATTTCTTGCATTATGTTTGTTACGAGTATCCAGCG
TCGGATCCTTCTCTCTTTCGGATAGCCGCCGGCGCTGGGGCCCTGTTCTTGTCCAATGGCGGGAAAATTGAAGAAGGCGACTGTGGCGAGCCTTATGATTCTTTGCAGTACGATTTCAAC
CGCGATTCGTGCCCACAAGCTGAGGGCCGTATTCGGGCCATGGTTTGGTATCTCCGAAAATCACGCTCCGGTGTAGCTCCTGCTTTCTTGCGCCTCGTTTTCCGGGATTGCTCCATTGAG
GGTTGTGATTCTTCAGTTCTACTGGATGAAGCTGATGGAGTAGACTCAGAGAAAATGTCTCTTCCCAGTGAATCTCTCAATCGTTTCTATGTAATCAATATAATCAAAGAGGATCTCGAA
GAAATTTGCCCTGGTGTGGTTTCTTATTCGGATACTCTTCCTTTGGCTGCCAGAGAAGGTGTTGTTCTGGCTGGTGGTCCATTCTATCCACTGCATACTGGCAGGAGAGACAGCAGGCTT
GCTCTTGCAGATATAGCAACATTTGAGCTTCCTTTACCCAATGCTGATCTGCCTGAAACCCTTGCATCTTTTGCATCAAGGGGGTTTGATTTAAGAGAAACTGTTACATTTTTGGATGCT
CATGGCATTGGAGTCATCCACTGCATATTCTTCAAGAGTCATCTCTGTAACTTGGGGAGGATTAATGAATCTCTGGATCCCGGTTTTTTGAATCTGTTGAGATCAAAATGCAGAAACGTG
CATTCAGGGAGTGCTGTTCTGGCTGCTCCATTCAATCCACTCTATATCGGAAGCAGAGACAGTATGCAAATGCTTACTTTTGCTGTTATTGCAACGAATGCTGGTCTGTCCACATTCGAA
TTAAGAGAAATGTCTTCCCTCTGCAGGCGTATGTATTTATCTTTTCTTTCCATTTTATGCATTATTCAATCAGATTATGATAGTGTAGTTCAACTAATCATTTATTCAATGTATTTAACC
TTACAGAAGCTCTGA

Retrieve as FASTA