Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
353 (331) |
| PWM (Da): |
38507.96 (36115.7) |
Transmb domain: |
i7-25o |
| PI (pH): |
4.69 (4.60) |
Peptide Signal: |
cut: 23 range:23-353 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MEKNSRFLGA ILTLMFILSV GAFSAKEFRD DLPEPVEGLS WRFYDESCPN VESIVNATLD SFLEEDITQA AGLLRLYFHD CFVQGCDASI LLDGTVSDPS EQEAAPNLTL RAEAFEIINA
IKAAVEAVCS GVVSCADILT LATRDSIKKA GGPEYAVPLG RRDSLDFANA SVTEQNLPAP TSNVTGMMSI FGAKGFHMTD LVALSGGHSI GISHCASFTN RLYPTLDPTF AKHLYLACPT
NTTVNTTNLD IRTPNLFDNK YYVNLQYRQA LLTSDEALNL NSTTQHIAKN FSQHQKLFFH SFMLGMLKMS QLGVLTGSEG EIRKNCSVSN SHSDHYSIYS IVDTDEESSL SFM
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (no prediction from SymDB, scaffold787) and RNA seq , ).(,gba_locus_40818_iso_1_len_565_ver_2last exon |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGAGAAGA ATAGCAGGTT TCTCGGTGCT ATTTTAACTT TGATGTTTAT ATTGTCTGTC GGCGCTTTTT CTGCAAAGGA ATTCAGGGAT GATCTGCCGG AGCCAGTTGA AGGTCTTTCA
TGGAGATTCT ACGACGAGAG TTGCCCCAAC GTGGAGTCCA TAGTCAATGC TACTCTCGAC TCTTTCTTGG AAGAAGATAT CACCCAAGCT GCTGGATTGC TCAGACTCTA CTTCCACGAC
TGCTTCGTCC AGGTATAATC GCATATTTTA CATGAAATTT GCTCAATCCG AAATGTTTTT CGTTGATAGC ATGATCATAT GGACATTAAT TTCTTCTGGC AGGGCTGCGA CGCATCCATC
TTGTTAGACG GGACGGTCAG CGATCCAAGT GAGCAGGAGG CTGCTCCAAA CTTGACACTT AGAGCGGAGG CCTTCGAGAT AATTAATGCT ATCAAAGCCG CGGTCGAGGC CGTCTGCAGC
GGCGTTGTAT CGTGTGCTGA CATCCTGACG TTAGCAACTC GCGATTCCAT CAAGAAGGTG AGTAATATTC AATCTTTTTT TTATTGCTTC TCAAGGGCAA TATGCCTAAC ATCAATTTGT
TATGAATTAG GCTGGAGGAC CAGAGTATGC TGTGCCGCTT GGCCGCAGAG ACAGCCTCGA CTTTGCCAAT GCATCAGTTA CTGAACAAAA CCTACCAGCT CCAACTTCGA ATGTAACAGG
AATGATGAGC ATTTTTGGTG CGAAAGGGTT TCATATGACA GATCTTGTGG CGCTTTCAGG TCAGTTGATT TTGCCCAAAA CAGTCTACGT TATATTAAAT CCAGTTTAGA GGTCGTTGAA
TATAGTCGAG ACTGAGCATG ATTAATTATT GTATTTCATG ATTTTTTTTT ACAGGTGGGC ACAGCATCGG CATCAGCCAC TGCGCCTCCT TCACAAATAG ACTGTACCCA ACTCTGGACC
CAACTTTTGC AAAGCATCTA TATTTGGCAT GCCCCACTAA TACCACCGTC AACACCACCA ATCTGGACAT TCGCACTCCA AATCTGTTTG ACAACAAGTA CTACGTCAAT CTACAATACA
GACAAGCCCT CTTGACCTCT GACGAGGCTC TAAACCTCAA CTCCACCACT CAACACATCG CCAAGAACTT CAGTCAGCAC CAGAAATTGT TCTTCCACAG CTTCATGCTT GGAATGCTCA
AGATGTCTCA ACTTGGTGTG CTCACCGGAA GCGAGGGAGA GATCCGCAAG AATTGCTCCG TTTCCAATTC GCATTCCGAT CACTATTCAA TATACTCGAT CGTCGATACA GATGAGGAAT
CATCATTATC TTTTATGTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGAGAAGA ATAGCAGGTT TCTCGGTGCT ATTTTAACTT TGATGTTTAT ATTGTCTGTC GGCGCTTTTT CTGCAAAGGA ATTCAGGGAT GATCTGCCGG AGCCAGTTGA AGGTCTTTCA
TGGAGATTCT ACGACGAGAG TTGCCCCAAC GTGGAGTCCA TAGTCAATGC TACTCTCGAC TCTTTCTTGG AAGAAGATAT CACCCAAGCT GCTGGATTGC TCAGACTCTA CTTCCACGAC
TGCTTCGTCC AGGGCTGCGA CGCATCCATC TTGTTAGACG GGACGGTCAG CGATCCAAGT GAGCAGGAGG CTGCTCCAAA CTTGACACTT AGAGCGGAGG CCTTCGAGAT AATTAATGCT
ATCAAAGCCG CGGTCGAGGC CGTCTGCAGC GGCGTTGTAT CGTGTGCTGA CATCCTGACG TTAGCAACTC GCGATTCCAT CAAGAAGGCT GGAGGACCAG AGTATGCTGT GCCGCTTGGC
CGCAGAGACA GCCTCGACTT TGCCAATGCA TCAGTTACTG AACAAAACCT ACCAGCTCCA ACTTCGAATG TAACAGGAAT GATGAGCATT TTTGGTGCGA AAGGGTTTCA TATGACAGAT
CTTGTGGCGC TTTCAGGTGG GCACAGCATC GGCATCAGCC ACTGCGCCTC CTTCACAAAT AGACTGTACC CAACTCTGGA CCCAACTTTT GCAAAGCATC TATATTTGGC ATGCCCCACT
AATACCACCG TCAACACCAC CAATCTGGAC ATTCGCACTC CAAATCTGTT TGACAACAAG TACTACGTCA ATCTACAATA CAGACAAGCC CTCTTGACCT CTGACGAGGC TCTAAACCTC
AACTCCACCA CTCAACACAT CGCCAAGAAC TTCAGTCAGC ACCAGAAATT GTTCTTCCAC AGCTTCATGC TTGGAATGCT CAAGATGTCT CAACTTGGTG TGCTCACCGG AAGCGAGGGA
GAGATCCGCA AGAATTGCTC CGTTTCCAAT TCGCATTCCG ATCACTATTC AATATACTCG ATCGTCGATA CAGATGAGGA ATCATCATTA TCTTTTATGT GA
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Retrieve as FASTA
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