Entry information : GbPrx33
Entry ID 8885
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2015-04-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-05 (Christophe Dunand)
Peroxidase information: GbPrx33
Name GbPrx33
Class Class III peroxidase    [Orthogroup: Prx179]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx33
start..stop
S start..stop
GbPrx48 652 0 1..353 1..357
GbPrx[P]83 518 0 43..350 17..324
GbPrx36 473 6e-169 10..326 8..330
GbPrx20 457 1e-162 1..351 1..356
Literature and cross-references GbPrx33
DNA ref. Phytozome 12:   scaffold08858 (92..490)
Protein sequence: GbPrx33
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   353
PWM (Da):   %s   38507.96  
PI (pH):   %s   4.69
Sequence
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Send to Peroxiscan
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MEKNSRFLGA ILTLMFILSV GAFSAKEFRD DLPEPVEGLS WRFYDESCPN VESIVNATLD SFLEEDITQA AGLLRLYFHD CFVQGCDASI LLDGTVSDPS EQEAAPNLTL RAEAFEIINA  IKAAVEAVCS GVVSCADILT LATRDSIKKA GGPEYAVPLG RRDSLDFANA SVTEQNLPAP TSNVTGMMSI FGAKGFHMTD LVALSGGHSI GISHCASFTN RLYPTLDPTF AKHLYLACPT 
NTTVNTTNLD IRTPNLFDNK YYVNLQYRQA LLTSDEALNL NSTTQHIAKN FSQHQKLFFH SFMLGMLKMS QLGVLTGSEG EIRKNCSVSN SHSDHYSIYS IVDTDEESSL SFM 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no prediction from SymDB, scaffold787) and RNA seq , ).(,gba_locus_40818_iso_1_len_565_ver_2last exon
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGAAGA ATAGCAGGTT TCTCGGTGCT ATTTTAACTT TGATGTTTAT ATTGTCTGTC GGCGCTTTTT CTGCAAAGGA ATTCAGGGAT GATCTGCCGG AGCCAGTTGA AGGTCTTTCA  TGGAGATTCT ACGACGAGAG TTGCCCCAAC GTGGAGTCCA TAGTCAATGC TACTCTCGAC TCTTTCTTGG AAGAAGATAT CACCCAAGCT GCTGGATTGC TCAGACTCTA CTTCCACGAC  TGCTTCGTCC AGGTATAATC GCATATTTTA CATGAAATTT GCTCAATCCG AAATGTTTTT CGTTGATAGC ATGATCATAT GGACATTAAT TTCTTCTGGC AGGGCTGCGA CGCATCCATC  TTGTTAGACG GGACGGTCAG CGATCCAAGT GAGCAGGAGG CTGCTCCAAA CTTGACACTT AGAGCGGAGG CCTTCGAGAT AATTAATGCT ATCAAAGCCG CGGTCGAGGC CGTCTGCAGC  GGCGTTGTAT CGTGTGCTGA CATCCTGACG TTAGCAACTC GCGATTCCAT CAAGAAGGTG AGTAATATTC AATCTTTTTT TTATTGCTTC TCAAGGGCAA TATGCCTAAC ATCAATTTGT  TATGAATTAG GCTGGAGGAC CAGAGTATGC TGTGCCGCTT GGCCGCAGAG ACAGCCTCGA CTTTGCCAAT GCATCAGTTA CTGAACAAAA CCTACCAGCT CCAACTTCGA ATGTAACAGG  AATGATGAGC ATTTTTGGTG CGAAAGGGTT TCATATGACA GATCTTGTGG CGCTTTCAGG TCAGTTGATT TTGCCCAAAA CAGTCTACGT TATATTAAAT CCAGTTTAGA GGTCGTTGAA  TATAGTCGAG ACTGAGCATG ATTAATTATT GTATTTCATG ATTTTTTTTT ACAGGTGGGC ACAGCATCGG CATCAGCCAC TGCGCCTCCT TCACAAATAG ACTGTACCCA ACTCTGGACC  CAACTTTTGC AAAGCATCTA TATTTGGCAT GCCCCACTAA TACCACCGTC AACACCACCA ATCTGGACAT TCGCACTCCA AATCTGTTTG ACAACAAGTA CTACGTCAAT CTACAATACA  GACAAGCCCT CTTGACCTCT GACGAGGCTC TAAACCTCAA CTCCACCACT CAACACATCG CCAAGAACTT CAGTCAGCAC CAGAAATTGT TCTTCCACAG CTTCATGCTT GGAATGCTCA  AGATGTCTCA ACTTGGTGTG CTCACCGGAA GCGAGGGAGA GATCCGCAAG AATTGCTCCG TTTCCAATTC GCATTCCGAT CACTATTCAA TATACTCGAT CGTCGATACA GATGAGGAAT 
CATCATTATC TTTTATGTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGAAGA ATAGCAGGTT TCTCGGTGCT ATTTTAACTT TGATGTTTAT ATTGTCTGTC GGCGCTTTTT CTGCAAAGGA ATTCAGGGAT GATCTGCCGG AGCCAGTTGA AGGTCTTTCA  TGGAGATTCT ACGACGAGAG TTGCCCCAAC GTGGAGTCCA TAGTCAATGC TACTCTCGAC TCTTTCTTGG AAGAAGATAT CACCCAAGCT GCTGGATTGC TCAGACTCTA CTTCCACGAC  TGCTTCGTCC AGGGCTGCGA CGCATCCATC TTGTTAGACG GGACGGTCAG CGATCCAAGT GAGCAGGAGG CTGCTCCAAA CTTGACACTT AGAGCGGAGG CCTTCGAGAT AATTAATGCT  ATCAAAGCCG CGGTCGAGGC CGTCTGCAGC GGCGTTGTAT CGTGTGCTGA CATCCTGACG TTAGCAACTC GCGATTCCAT CAAGAAGGCT GGAGGACCAG AGTATGCTGT GCCGCTTGGC  CGCAGAGACA GCCTCGACTT TGCCAATGCA TCAGTTACTG AACAAAACCT ACCAGCTCCA ACTTCGAATG TAACAGGAAT GATGAGCATT TTTGGTGCGA AAGGGTTTCA TATGACAGAT  CTTGTGGCGC TTTCAGGTGG GCACAGCATC GGCATCAGCC ACTGCGCCTC CTTCACAAAT AGACTGTACC CAACTCTGGA CCCAACTTTT GCAAAGCATC TATATTTGGC ATGCCCCACT  AATACCACCG TCAACACCAC CAATCTGGAC ATTCGCACTC CAAATCTGTT TGACAACAAG TACTACGTCA ATCTACAATA CAGACAAGCC CTCTTGACCT CTGACGAGGC TCTAAACCTC  AACTCCACCA CTCAACACAT CGCCAAGAAC TTCAGTCAGC ACCAGAAATT GTTCTTCCAC AGCTTCATGC TTGGAATGCT CAAGATGTCT CAACTTGGTG TGCTCACCGG AAGCGAGGGA 
GAGATCCGCA AGAATTGCTC CGTTTCCAAT TCGCATTCCG ATCACTATTC AATATACTCG ATCGTCGATA CAGATGAGGA ATCATCATTA TCTTTTATGT GA 

Retrieve as FASTA