Entry information : CsPrx20 (orange1.1g020449m/Cs2g25450)
Entry ID 8908
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2017-12-14 (Qiang Li)
Peroxidase information: CsPrx20 (orange1.1g020449m/Cs2g25450)
Name (synonym) CsPrx20 (orange1.1g020449m/Cs2g25450)
Class Class III peroxidase    [Orthogroup: Prx031]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus sinensis    [TaxId: 2711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsPrx20
start..stop
S start..stop
CclPrx43 659 0 3..326 1..324
IaquPrx45 542 0 1..326 1..329
VvPrx65 529 0 13..326 9..322
PtPrx82 525 0 7..326 3..322
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8908' 'complement(join(691604..692176,692255..692446,692870..693085))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 692870..693085 214 N° 2 692255..692446 190 N° 3 691604..692176 571  
complement(join(691604..692176,692255..692446,692870..693085))


exon

Literature and cross-references CsPrx20 (orange1.1g020449m/Cs2g25450)
DNA ref. Citrus sinensis Annotation Project:   chr2 (24680776..24682614) Phytozome 12:   scaffold00038 (693085..691604)
Protein sequence: CsPrx20 (orange1.1g020449m/Cs2g25450)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (301)
PWM (Da):   %s   35385.42 (32342.0) Transmb domain:   %s   i5-27o
PI (pH):   %s   4.73 (4.79) Peptide Signal:   %s   cut: 26 range:26-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MEMGVMREMMVFLFTILLIMQRGDGQLVENFYSSTCPNVESIVNRVVSTKFSQTFITVPATLRLFFHDCFIVGCDASVLIQSPNGDAEKDAPDNLSLAGDGFDTVVQAKQAVEAQCPGVV
SCADILAIAARDVVVLAGGAPFSVELGRRDGLVSRASSVKGNLPEPTFNLDELNQMFAKHGLSQIDMIALSGAHTLGFSHCDRFANRIYSFSSSSPVDPSLDPAYAQQLMQSCPRNVDPQ
IAINMDPVTPRTFDNMYYQNLVAGKGLFTSDQVLFTDASSQPTVNDFARNPLDFNAAFATAMRKLGRVGVKTGNQGEIRRDCTAFN*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAAATGGGAGTAATGAGAGAGATGATGGTGTTTTTGTTTACAATTCTTTTGATTATGCAGAGAGGCGATGGGCAATTGGTAGAAAATTTCTACTCGTCAACTTGTCCTAATGTTGAA
TCCATTGTGAACAGAGTGGTGTCAACAAAGTTTAGCCAAACGTTCATCACCGTTCCGGCAACTCTCCGGCTCTTTTTCCACGACTGCTTCATCGTG
GTAACTCATTATAACTAGCGTTTA
TCAAATACTAGATGATCATAAGGTTATATTTTCTGGTTTATAGCAGAAGCAATGTTGTTGTTGGNNNNNNNNNNNNNNNNNNNNNAGCAATTAATTTTTAGTAGACGGGTCGTTATTGGA
GGCTATCACACGTTATAGCTTAGACAAGAACAATTACCAAACCATTTTGACTTGAGAACATAATAGCGAATGGCTTAACATGGAGTTAACAGATTCAAGTACCACAAGCTTGGTCTGTAT
CATTTGACAACTCATAGTACAATATAAAGTGGTGGCATGGAAAGAAGAATAGAAAGATGCACACACGTGTTTGACTAGGGTGGCATCTCTTATGGCTTAGGCTACTGTGATAATTAGCGT
GGATTACAATAATTGGCAACTGAGTTGTTTCTTTGACAGGGGGATGTGATGCCTCGGTCCTGATTCAATCGCCAAATGGGGACGCGGAGAAGGATGCCCCAGACAACCTTTCCCTTGCAG
GAGACGGATTTGACACTGTTGTTCAGGCTAAGCAAGCTGTGGAAGCACAGTGCCCCGGCGTAGTCTCTTGCGCAGACATCTTAGCTATTGCTGCAAGGGATGTTGTAGTCCTG
GTAATTA
GCATCATTATTAACTAGCAACCACAATGTTTCCCACTTTGTGAAGTTAAATTTAGTCCGATCAATATGCAGGCGCTGGAGGTGCTCCATTCAGCGTAGAATTGGGAAGACGCGATGGCCT
TGTATCTAGAGCCTCAAGTGTGAAGGGAAATTTGCCAGAACCAACATTCAATCTTGATGAACTCAACCAAATGTTTGCCAAACACGGCCTCAGCCAAATTGACATGATTGCACTCTCAGG
AGCTCACACTTTAGGCTTCTCTCATTGCGACCGCTTTGCAAACCGCATCTACTCATTCTCTTCATCATCTCCTGTCGATCCTTCATTGGATCCAGCTTATGCCCAGCAGTTAATGCAATC
CTGTCCGCGAAATGTTGACCCCCAAATTGCCATCAACATGGATCCTGTAACCCCACGAACATTTGACAATATGTACTACCAGAATCTAGTGGCGGGGAAGGGCTTGTTTACTTCGGATCA
AGTGCTATTCACTGATGCATCATCTCAGCCTACTGTGAATGACTTTGCTAGAAACCCTCTTGACTTTAATGCAGCATTTGCCACAGCTATGAGAAAGCTTGGCAGAGTTGGGGTTAAAAC
CGGTAACCAAGGAGAAATACGAAGAGACTGCACAGCATTTAATTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAAATGGGAGTAATGAGAGAGATGATGGTGTTTTTGTTTACAATTCTTTTGATTATGCAGAGAGGCGATGGGCAATTGGTAGAAAATTTCTACTCGTCAACTTGTCCTAATGTTGAA
TCCATTGTGAACAGAGTGGTGTCAACAAAGTTTAGCCAAACGTTCATCACCGTTCCGGCAACTCTCCGGCTCTTTTTCCACGACTGCTTCATCGTG
GGATGTGATGCCTCGGTCCTGATT
CAATCGCCAAATGGGGACGCGGAGAAGGATGCCCCAGACAACCTTTCCCTTGCAGGAGACGGATTTGACACTGTTGTTCAGGCTAAGCAAGCTGTGGAAGCACAGTGCCCCGGCGTAGTC
TCTTGCGCAGACATCTTAGCTATTGCTGCAAGGGATGTTGTAGTCCTG
GCTGGAGGTGCTCCATTCAGCGTAGAATTGGGAAGACGCGATGGCCTTGTATCTAGAGCCTCAAGTGTGAAG
GGAAATTTGCCAGAACCAACATTCAATCTTGATGAACTCAACCAAATGTTTGCCAAACACGGCCTCAGCCAAATTGACATGATTGCACTCTCAGGAGCTCACACTTTAGGCTTCTCTCAT
TGCGACCGCTTTGCAAACCGCATCTACTCATTCTCTTCATCATCTCCTGTCGATCCTTCATTGGATCCAGCTTATGCCCAGCAGTTAATGCAATCCTGTCCGCGAAATGTTGACCCCCAA
ATTGCCATCAACATGGATCCTGTAACCCCACGAACATTTGACAATATGTACTACCAGAATCTAGTGGCGGGGAAGGGCTTGTTTACTTCGGATCAAGTGCTATTCACTGATGCATCATCT
CAGCCTACTGTGAATGACTTTGCTAGAAACCCTCTTGACTTTAATGCAGCATTTGCCACAGCTATGAGAAAGCTTGGCAGAGTTGGGGTTAAAACCGGTAACCAAGGAGAAATACGAAGA
GACTGCACAGCATTTAATTAG

Retrieve as FASTA