Entry information : CsPrx[P]67 (orange1.1g037303m)
Entry ID 8924
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Qiang Li
Last annotation changes 2017-12-14 (Qiang Li)
Peroxidase information: CsPrx[P]67 (orange1.1g037303m)
Name (synonym) CsPrx[P]67 (orange1.1g037303m)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus sinensis    [TaxId: 2711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsPrx[P]67
start..stop
S start..stop
CsPrx[P]72 96 1.57e-28 15..67 1..53
CclPrx101 101 4.62e-28 1..69 72..154
CsPrx35 99 2.32e-27 1..69 72..154
NtPrx36-1A 98 8.03e-27 1..69 73..155
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8924' 'complement(join(129394..129453,129580..129729))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 129580..129729 148 N° 2 129394..129453 58  
complement(join(129394..129453,129580..129729))


exon

Literature and cross-references CsPrx[P]67 (orange1.1g037303m)
DNA ref. Phytozome 12:   scaffold00248 (129729..129394)
Protein sequence: CsPrx[P]67 (orange1.1g037303m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   69 (338)
PWM (Da):   %s   7785.85 (35510.2) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.61 (8.14) Peptide Signal:   %s   cut: 29 range:21-358
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCYASILLDDIDDFKWGKNAWPNRNSAQGYEVIDNIKAEVEKACPLTISYSEGPYWPVRLGRRDGLINS*

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from phytozome (Both 5' and 3' end are missing, very short PS).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGTTGCTATGCCTCAATTCTTCTGGATGACATAGATGATTTCAAGTGGGGGAAAAACGCTTGGCCAAATCGTAATTCAGCTCAAGGATATGAAGTCATTGACAACATAAAAGCAGAAGTT
GAAAAAGCTTGCCCATTAACTATTTCTTAT
GTTGACATTAATTTTGGCTCATGCAACCAAAGAGGCTGTTGTGGTGGTGATTATAGTCTTAGAACTCAAGCCAAAAGAACTCTTTCTTCA
ACTAACTTTCCATTACATATACCTGGTTTAATTTAGTCTCAGAAGGGCCCTATTGGCCAGTTCGATTAGGGCGTAGAGATGGATTAATTAACAGCTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGTTGCTATGCCTCAATTCTTCTGGATGACATAGATGATTTCAAGTGGGGGAAAAACGCTTGGCCAAATCGTAATTCAGCTCAAGGATATGAAGTCATTGACAACATAAAAGCAGAAGTT
GAAAAAGCTTGCCCATTAACTATTTCTTAT
TCAGAAGGGCCCTATTGGCCAGTTCGATTAGGGCGTAGAGATGGATTAATTAACAGCTAG

Retrieve as FASTA