Entry information : CsPrx[P]68 (orange1.1g038024m)
Entry ID 8925
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2011-12-13 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2017-12-14 (Qiang Li)
Peroxidase information: CsPrx[P]68 (orange1.1g038024m)
Name (synonym) CsPrx[P]68 (orange1.1g038024m)
Class Class III peroxidase     [Orthogroup: Prx017]*
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus sinensis    [TaxId: 2711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsPrx[P]68
start..stop
S start..stop
CclPrx116 288 1.19e-99 26..167 181..322
CrubPrx40 223 9.76e-76 27..167 30..170
GhPrx05 227 1.72e-75 26..167 182..323
CagraPrx52 222 2.51e-73 26..167 185..326
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8925' 'join(543..624,733..1154)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 543..624 80 N° 2 733..1154 420  
join(543..624,733..1154)


exon

Literature and cross-references CsPrx[P]68 (orange1.1g038024m)
DNA ref. Phytozome 12:   scaffold09097 (543..1154)
Protein sequence: CsPrx[P]68 (orange1.1g038024m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   167
PWM (Da):   %s   18314.29  
PI (pH):   %s   6.34
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CHYLIDISELSQVSRYNITLCKIHEISTAHTIGTTACFFMTKRLYNFFPGGGSDPGINPSFVVELKATCPQNGDVNVRLPIDRGSERVFDKQILQNIKDGFAVLESDSRLNDDIITNAII
DSYLGILSPIFGPSFEADFVESIVKMGHIGVKTGQQGHVRRLCAAFS

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from phytozome (Only 3' end).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGTCATTATTTGATTGATATAAGTGAATTATCTCAAGTGAGTAGATACAACATAACTCTATGTAAAATACATGAAATATCAAAAGTTACTTTTTAAAATAAATTATTTAAGTCAAGGGAA
TCTCATAGCATAAAAAAGAGATTTAGGTGGAACTTTTCTTANNNNNNNNNNNNNNNNNNNNNNNNTTTTCAGCTGCGCATACTATTGGAACCACCGCATGTTTCTTCATGACGAAACGGC
TTTACAATTTTTTCCCTGGTGGCGGATCCGATCCCGGAATCAACCCTAGCTTCGTTGTAGAGCTAAAAGCAACTTGCCCTCAGAACGGCGACGTTAATGTACGATTACCAATTGATCGTG
GAAGTGAGAGGGTATTTGACAAGCAGATTTTGCAAAACATTAAGGATGGCTTCGCTGTTCTGGAATCTGATTCTAGGCTCAATGATGACATAATTACCAATGCCATAATTGACTCCTACT
TAGGGATTCTAAGCCCAATATTTGGTCCATCTTTTGAGGCTGATTTTGTTGAGTCAATTGTGAAGATGGGCCACATTGGTGTCAAAACAGGGCAGCAAGGTCACGTGAGACGCCTTTGTG
CTGCTTTCAGCTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGTCATTATTTGATTGATATAAGTGAATTATCTCAAGTGAGTAGATACAACATAACTCTATGTAAAATACATGAAATATCAACTGCGCATACTATTGGAACCACCGCATGTTTCTTCATG
ACGAAACGGCTTTACAATTTTTTCCCTGGTGGCGGATCCGATCCCGGAATCAACCCTAGCTTCGTTGTAGAGCTAAAAGCAACTTGCCCTCAGAACGGCGACGTTAATGTACGATTACCA
ATTGATCGTGGAAGTGAGAGGGTATTTGACAAGCAGATTTTGCAAAACATTAAGGATGGCTTCGCTGTTCTGGAATCTGATTCTAGGCTCAATGATGACATAATTACCAATGCCATAATT
GACTCCTACTTAGGGATTCTAAGCCCAATATTTGGTCCATCTTTTGAGGCTGATTTTGTTGAGTCAATTGTGAAGATGGGCCACATTGGTGTCAAAACAGGGCAGCAAGGTCACGTGAGA
CGCCTTTGTGCTGCTTTCAGCTGA

Retrieve as FASTA