Entry information : GmPrx105 (Glyma01g40870.1)
Entry ID 8935
Creation 2011-07-04 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-12-13 (Qiang Li)
Peroxidase information: GmPrx105 (Glyma01g40870.1)
Name (synonym) GmPrx105 (Glyma01g40870.1)
Class Class III peroxidase    [Orthogroup: Prx043]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx105
start..stop
S start..stop
MtPrx90 584 0 16..333 16..333
PpePrx23 502 0 5..333 3..334
PtPrx83 500 4.39e-180 19..332 27..338
VvPrx15 483 1.78e-173 1..331 1..331
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8935' 'complement(join(52517050..52517477,52517804..52517969,52518057..52518248,52518370..52518582))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 52518370..52518582 211 N° 2 52518057..52518248 190 N° 3 52517804..52517969 164 N° 4 52517050..52517477 426
complement(join(52517050..52517477,52517804..52517969,52518057..52518248,5251837 0..52518582))


exon

Literature and cross-references GmPrx105 (Glyma01g40870.1)
DNA ref. Phytozome 12:   Gm01 (52518582..52517050)
Protein sequence: GmPrx105 (Glyma01g40870.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (310)
PWM (Da):   %s   37610.29 (34984.9)  
PI (pH):   %s   6.78 (6.60) Peptide Signal:   %s   cut: 23 range:23-332
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MERMRLLFIFISILFNATTLSGVELLVHNYYKEKCPLAEDIVRHNVEVAVLKNPRLAASLLRLHFHDCFVMGCDASVLLDNVEGMTSEKLAGPNLNSLRGFEVIDKIKYLLEEECPITVS
CADILAMAARDAVELRGGPRWEVLLGRKDALESSFSGANILIPAPNSSLEVLIDNFKQQGLDIEDLVTLSGSHTIGRARCLSFRQRIYDAKEEYHYGYDHYKRYTSFRRILRSICPVEGR
DNKFAPLDFQTPKRFDNHYFINILEGKGLLGSDNVLISHDLDGKITEQVWAYASNEKLFFASFAKSMIKMGNINVLTGNEGEIRRNCRFVNA*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from Phytozome (5' end is missing). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCGCATGAGACTCTTATTCATCTTTATTTCTATTTTGTTCAATGCTACAACTCTGAGTGGTGTTGAACTTCTTGTTCATAACTACTACAAGGAGAAGTGTCCCTTAGCCGAAGAC
ATCGTTAGACATAACGTGGAAGTGGCAGTTTTAAAAAATCCTCGTTTGGCAGCCTCTCTACTTCGCTTACACTTCCACGATTGTTTTGTCATG
GTAACCATTTCCTTTTTCTGTTTCTTC
CTCTGCTTTGAGTTTTTCATTTTTCACGGCCCATGTTTCTCTGTTTGTTTAAACTTATTCATGATTCTTTTGTGGTTATTGAATTGAACATAAGGGGGATGCGATGCATCCGTGCTTTTG
GACAACGTGGAGGGCATGACAAGTGAAAAGTTGGCTGGACCAAATCTGAACTCTTTACGTGGATTTGAGGTCATAGACAAGATAAAGTATTTGCTTGAAGAAGAATGTCCTATTACTGTT
TCATGTGCTGACATCCTTGCCATGGCTGCACGTGATGCTGTTGAATTG
GTAAACACTGCTTTGTCACAGGGGTCAAATGAATGTAGTTATATTTTTATTTTGCTTTACAACAATTTCTAT
CATTTGTTTTTGAAGAGAGAGGAGGACCAAGATGGGAAGTCTTGCTTGGAAGGAAGGATGCTCTCGAGTCAAGTTTCAGTGGAGCTAACATATTAATTCCGGCTCCAAATTCATCTTTGG
AGGTTCTCATAGATAATTTTAAGCAACAAGGCCTCGACATAGAAGACTTGGTAACTCTATCTG
GTATATTTATTATTTTGACAAGATTTATATACAACTTTCTAAATTGCTGTTAGTACT
ATTTTCTAATCAAAATTAGTGTCCCACGTCTTCATAAAAAAAAAAGTAGTGACCCACCTTTATGAATTATTGAAATGAAACTAATTTTAATTGAAAAATAACACAACCAAAATCCCAACT
CTAATTGATGAATAACACAAACAATACCTATAAAAACTCTAATTTTGTCCTTATAATTTGTTCAAAGTTCAATCAAATGTTAATATTTTGGGGCTCTCACAAAGGAAGAAGAGATTAAGC
ACGTAGAGTTCCTGCTTGACAAAATACAGGTGTAGCCATACTATAGGAAGAGCAAGATGTCTAAGCTTCAGGCAGAGGATATATGATGCAAAAGAGGAATATCACTATGGCTATGATCAC
TACAAACGATACACAAGTTTCAGGAGAATCCTGCGGTCCATATGCCCTGTTGAGGGAAGGGACAATAAATTTGCACCCTTGGATTTTCAAACCCCAAAAAGATTTGACAATCACTACTTC
ATAAACATTCTTGAAGGGAAAGGCTTGTTAGGTTCTGACAATGTTCTTATCAGCCATGACTTAGATGGAAAGATTACAGAGCAGGTGTGGGCTTATGCCTCTAATGAAAAACTTTTCTTT
GCTTCATTTGCTAAATCTATGATTAAGATGGGAAACATCAATGTTCTTACAGGAAATGAGGGGGAAATTAGGAGGAATTGTAGGTTTGTCAACGCTTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCGCATGAGACTCTTATTCATCTTTATTTCTATTTTGTTCAATGCTACAACTCTGAGTGGTGTTGAACTTCTTGTTCATAACTACTACAAGGAGAAGTGTCCCTTAGCCGAAGAC
ATCGTTAGACATAACGTGGAAGTGGCAGTTTTAAAAAATCCTCGTTTGGCAGCCTCTCTACTTCGCTTACACTTCCACGATTGTTTTGTCATG
GGATGCGATGCATCCGTGCTTTTGGAC
AACGTGGAGGGCATGACAAGTGAAAAGTTGGCTGGACCAAATCTGAACTCTTTACGTGGATTTGAGGTCATAGACAAGATAAAGTATTTGCTTGAAGAAGAATGTCCTATTACTGTTTCA
TGTGCTGACATCCTTGCCATGGCTGCACGTGATGCTGTTGAATTG
AGAGGAGGACCAAGATGGGAAGTCTTGCTTGGAAGGAAGGATGCTCTCGAGTCAAGTTTCAGTGGAGCTAACATA
TTAATTCCGGCTCCAAATTCATCTTTGGAGGTTCTCATAGATAATTTTAAGCAACAAGGCCTCGACATAGAAGACTTGGTAACTCTATCTG
GTAGCCATACTATAGGAAGAGCAAGATGT
CTAAGCTTCAGGCAGAGGATATATGATGCAAAAGAGGAATATCACTATGGCTATGATCACTACAAACGATACACAAGTTTCAGGAGAATCCTGCGGTCCATATGCCCTGTTGAGGGAAGG
GACAATAAATTTGCACCCTTGGATTTTCAAACCCCAAAAAGATTTGACAATCACTACTTCATAAACATTCTTGAAGGGAAAGGCTTGTTAGGTTCTGACAATGTTCTTATCAGCCATGAC
TTAGATGGAAAGATTACAGAGCAGGTGTGGGCTTATGCCTCTAATGAAAAACTTTTCTTTGCTTCATTTGCTAAATCTATGATTAAGATGGGAAACATCAATGTTCTTACAGGAAATGAG
GGGGAAATTAGGAGGAATTGTAGGTTTGTCAACGCTTAG

Retrieve as FASTA