View Redoxidase 8954

Entry information : GmPrx134 (Glyma03g04870.1)

Entry ID	8954
Creation	2011-07-04 (Qiang Li)
Last sequence changes	2011-10-18 (Qiang Li)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2011-12-13 (Qiang Li)

Peroxidase information: GmPrx134 (Glyma03g04870.1)

Name (synonym)

GmPrx134 (Glyma03g04870.1)

Class

Class III peroxidase [Orthogroup: Prx129]*

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Glycine

Organism

Glycine max (soybean) [TaxId: 3847 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	GmPrx134 start..stop	S start..stop
MtPrx32	392	1.77e-137	5..326	2..340
MtPrx24	391	5.04e-137	15..326	12..338
AhPrx04	386	2.34e-135	7..326	3..316
GmPrx[P]95	380	1.39e-133	28..320	5..295

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8954' 'complement(join(5064367..5064752,5064837..5065002,5066482..5066679,5066957..5067187))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	5066957..5067187	229	N° 2	5066482..5066679	196	N° 3	5064837..5065002	164	N° 4	5064367..5064752	384
complement(join(5064367..5064752,5064837..5065002,5066482..5066679,5066957..5067 187))

Literature and cross-references GmPrx134 (Glyma03g04870.1)

DNA ref.	Phytozome 12: Gm03 (5067187..5064367)

Protein sequence: GmPrx134 (Glyma03g04870.1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	326 (300)
PWM (Da):	35696.26 (32826.8)
PI (pH):	8.34 (8.38)	Peptide Signal:	cut: 27 range:27-326

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MTMSATFPELKLRICLFLCLICIASADSANELRPDFYNSQCSQAL
QVIKKEVTAAVRKDPAIGAALIRRQFYDCFVQGCDASVLLKDTANFTGEQSVIPDVDSTNGTDIILIEKIKARLEKLCPDVVSCADIIAVAAKDSVVALGGPTWNVLLGRRDSTTANLSAVLTDFPTTFMNLTELLATFGKKNFTAQEMVAF
TGAHTTGRIKCLFFRTRIYNESNINPSYARSLQAKCPFVGGDDNLAPLDRTTPILFDNAYYKNLLKQKGLLHSDQQLYNNGSTDTIVEFYAKNPLGFRTDFAKVMTKMGNLSPLTGTNGQ
IRKQCSKVN

Retrieve as FASTA

Remarks

Complete sequence from genomic. Incorrect prediction from Phytozome (5' end is missing). No EST.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGACCATGTCTGCAACTTTTCCAGAACTTAAACTCAGGATTTGTTTGTTTTTATGCCTTATTTGTATAGCTTCAGCAGATTCTGCTAATGAGTTACGCCCAGACTTTTATAATTCACAA
TGTTCCCAAGCACTTCAAGTCATTAAGAAAGAAGTAACCGCTGCTGTGAGGAAAGACCCTGCCATTGGTGCAGCCTTGATTCGTCGCCAATTCTATGATTGCTTTGTCCAAGCAAGTTTT
CATTATCCAAAAACTTTATGCTTTGCTTATGAAAAGTTTCATGCAATATGCTTTTTCTGTATGCATAAGTTCCAATAGTCCTTCTATATGTGAAATTAAACTACATTATTTACTTAACAA
TTAAAAACCACCCAAAGTATCATAGTCACACACTCACACACACACAAACTTTTAGAAGGTATGTAAAACAAAAGAAGAAAACCTTGATTATCTAAACCGGTTTTTAGAAAAGTTTATCTT
GATTTTTTATGCTTTTAATATTGTATAGGGGGATGTGATGCATCAGTGTTACTGAAAGACACAGCAAATTTCACGGGTGAACAAAGTGTCATTCCCGATGTTGATTCTACAAATGGTACG
GATATCATACTCATAGAGAAGATAAAAGCTAGACTGGAGAAACTGTGTCCTGATGTTGTCTCTTGCGCTGACATTATAGCTGTTGCTGCAAAAGATTCTGTCGTTGCGGTAAGTACTCAA
ATTGTTGGAGAAACAACAATATGTTTCTGGCATATTAAGAAAGAAAAGTTACTTGAACACCTAGAGCTTGCTTACACTAAGAGAGATAGGAAGAGAGAAAAAATAAGTGATTAATTTGAG
AAAATTGATTCTTTAACTTGCATGAGGGTGTGTAAATATTTTGAGAAATAAAAAGAGAAAAAGATAAATGATTGATGGAATTAATTATATGATGTGATAAAAAAATGATAAAGAGAAACA
AAATGTTTATAAAATATTTGTAAATTATGAGTGTTTAAATATTATCATTCTTGATATAATTGGAGATCATTATATAGCATAAAGAGACAGAGAGAAGATGAACGTCAATGAAATGTTTGA
TAGATAGAATGATGATATTTAAACATTCATATTTTTTTAACATGACACGTTAAAATATTGATAATACCTATATTTTTCTTATTTAAATACCTCTCTCACTAGTGTCTATTGGAAACTTGA
TTGTCTATAAATAATTTTTCTTATTAAGATGTCAAACCAATTCAAAATATATATTATTATTAGATAGTCTTCAACAACTATATATTTATGGTCTTAATTAATTTTTATTCCATACATTTA
AGTTTTTCAAAATATTAATAACATTTAATTATATATCATATAAAAATTATTTGAGATCATGGTCTTAGACCACCATACAATTTCTCTGCAAAATGAAGATGACTTTATATATTATAGATG
ATAATTTTTGTACACATATTAAAATACAAACACATTATTAATATCTCTTATTCTTCCTTCCTCTCTCTATATCTCTCTTAATTTATGTCACATCACATATCATCAATTATATTCATAATC
TATCTCTTCTTTATCCTTATATCTCTTTGGGTGTAGACACCAAAAAACTATTCAACAATTTTTTTAATATATTGTCCTATGTCTCACACACAACCACATATTTACTTATATTTCAATTAT
GGTTTGAGGACCTAAAATTGTGTCTGCACATATGTATTTACTTCTATTTAAATTATGGTTTGAGACCTAAAGTTGTGTTCAAACACAATTTAACTATGATTGCTCTACACAAATTATATA
TTTATGGATGAAGCTCGTTCTATATTCTCCTCCAAACTAACATATAATAATGTACACAAACTATTATTTAAACGTGTAACAAAACTGTCAAATTAAGATTTTCCTGTACAACTTGTATTT
TTCAAACCTTATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCCAACATTGATGTATATATGTATGAATAGTTTAATTTGTGTAGTGTCAAATGATTCTCTTTTCCATTTCTGCATATGTATTTTACTGACGTGTGTGAT
GTCTGATGGATGATACATGATTCCCAGCTCTCGGTGGACCTACTTGGAATGTTCTCTTGGGTAGAAGAGACTCAACAACTGCCAATCTAAGTGCTGTTTTAACAGATTTTCCCACTACTT
TTATGAATCTTACTGAACTTCTTGCTACGTTCGGGAAAAAAAATTTCACAGCCCAAGAAATGGTTGCTTTTACAGGTTAATTAATTCCCATAATGGATTCTGATTTTATTTTGCTATATA
TAGTAAATATTCACAGAAATTAAATTTGTTGTTCATCAGGTGTGCTCACACTACAGGTAGAATCAAATGTTTATTCTTTCGAACAAGGATTTACAACGAAAGCAATATAAATCCCTCGTA
TGCAAGATCGTTGCAAGCTAAGTGTCCATTCGTAGGTGGTGATGACAACTTAGCTCCTTTAGATCGAACCACTCCAATCCTTTTTGACAATGCTTATTACAAGAATTTGCTGAAGCAAAA
GGGTCTTTTACACTCTGATCAACAGCTCTATAACAATGGTTCCACGGACACGATTGTTGAATTTTATGCAAAGAACCCTTTGGGGTTTAGAACAGATTTCGCTAAAGTAATGACTAAGAT
GGGTAACCTTAGTCCACTTACCGGCACCAACGGGCAGATTAGAAAGCAATGCAGCAAAGTCAATTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA