Entry information : GmPrx[P]147 (Glyma05g10070.1)
Entry ID 8959
Creation 2011-07-04 (Qiang Li)
Last sequence changes 2011-12-14 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2011-12-02 (Qiang Li)
Peroxidase information: GmPrx[P]147 (Glyma05g10070.1)
Name (synonym) GmPrx[P]147 (Glyma05g10070.1)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx[P]147
start..stop
S start..stop
GmPrx293 223 2e-74 1..138 193..331
LjPrx36 182 2e-58 1..138 190..326
MtPrx58 178 1e-56 1..138 190..326
GmPrx203 176 5e-56 1..138 191..327
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 10069136..10069550 415  
join(10069136..10069550)


exon

Literature and cross-references GmPrx[P]147 (Glyma05g10070.1)
DNA ref. Phytozome 12:   Gm05 (10069136..10069550)
Protein sequence: GmPrx[P]147 (Glyma05g10070.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   138
PWM (Da):   %s   15026.72  
PI (pH):   %s   9.07
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AGAHTIGYAR CFTLKQRLFN CKGTGKPDPS LDASLLQHLQ KLCPDNNSSN PNLAPLDPVT TYTFDSMYYK NLVKNLGLLP TDKALVSDGT TASLVYKYSQ WSVLLxYKDF DASFEKIGSI 
GVLTGQHGEI RKNYKVIN 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic. Inocorrect prediction from phytozome (only exon 4 and frame shift).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCAGGAGCAC ACACAATAGG ATATGCTAGG TGCTTCACAC TCAAGCAAAG GCTCTTCAAC TGTAAGGGCA CTGGAAAACC GGATCCATCA TTAGATGCTT CACTTTTACA ACATTTACAG  AAATTATGTC CAGATAACAA CAGTTCTAAC CCCAATTTGG CTCCCTTGGA TCCTGTCACC ACATACACAT TTGATAGCAT GTATTACAAA AACCTAGTGA AGAACTTAGG ATTACTACCA  ACTGATAAGG CTCTTGTGAG TGATGGTACA ACTGCTTCAT TGGTGTACAA GTATAGCCAG TGGTCTGTTT TACTTTnnTA CAAGGACTTT GATGCATCTT TTGAGAAGAT AGGAAGTATA 
GGAGTACTTA CAGGACAACA TGGGGAGATA AGGAAAAATT ACAAGGTGAT CAACTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCAGGAGCAC ACACAATAGG ATATGCTAGG TGCTTCACAC TCAAGCAAAG GCTCTTCAAC TGTAAGGGCA CTGGAAAACC GGATCCATCA TTAGATGCTT CACTTTTACA ACATTTACAG  AAATTATGTC CAGATAACAA CAGTTCTAAC CCCAATTTGG CTCCCTTGGA TCCTGTCACC ACATACACAT TTGATAGCAT GTATTACAAA AACCTAGTGA AGAACTTAGG ATTACTACCA  ACTGATAAGG CTCTTGTGAG TGATGGTACA ACTGCTTCAT TGGTGTACAA GTATAGCCAG TGGTCTGTTT TACTTTnnTA CAAGGACTTT GATGCATCTT TTGAGAAGAT AGGAAGTATA 
GGAGTACTTA CAGGACAACA TGGGGAGATA AGGAAAAATT ACAAGGTGAT CAACTAG 

Retrieve as FASTA