Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
138 |
PWM (Da): |
15026.72 |
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PI (pH):
| 9.07 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AGAHTIGYAR CFTLKQRLFN CKGTGKPDPS LDASLLQHLQ KLCPDNNSSN PNLAPLDPVT TYTFDSMYYK NLVKNLGLLP TDKALVSDGT TASLVYKYSQ WSVLLxYKDF DASFEKIGSI
GVLTGQHGEI RKNYKVIN
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Retrieve as FASTA
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Remarks |
Pseudogene sequence from genomic. Inocorrect prediction from phytozome (only exon 4 and frame shift). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GCAGGAGCAC ACACAATAGG ATATGCTAGG TGCTTCACAC TCAAGCAAAG GCTCTTCAAC TGTAAGGGCA CTGGAAAACC GGATCCATCA TTAGATGCTT CACTTTTACA ACATTTACAG
AAATTATGTC CAGATAACAA CAGTTCTAAC CCCAATTTGG CTCCCTTGGA TCCTGTCACC ACATACACAT TTGATAGCAT GTATTACAAA AACCTAGTGA AGAACTTAGG ATTACTACCA
ACTGATAAGG CTCTTGTGAG TGATGGTACA ACTGCTTCAT TGGTGTACAA GTATAGCCAG TGGTCTGTTT TACTTTnnTA CAAGGACTTT GATGCATCTT TTGAGAAGAT AGGAAGTATA
GGAGTACTTA CAGGACAACA TGGGGAGATA AGGAAAAATT ACAAGGTGAT CAACTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GCAGGAGCAC ACACAATAGG ATATGCTAGG TGCTTCACAC TCAAGCAAAG GCTCTTCAAC TGTAAGGGCA CTGGAAAACC GGATCCATCA TTAGATGCTT CACTTTTACA ACATTTACAG
AAATTATGTC CAGATAACAA CAGTTCTAAC CCCAATTTGG CTCCCTTGGA TCCTGTCACC ACATACACAT TTGATAGCAT GTATTACAAA AACCTAGTGA AGAACTTAGG ATTACTACCA
ACTGATAAGG CTCTTGTGAG TGATGGTACA ACTGCTTCAT TGGTGTACAA GTATAGCCAG TGGTCTGTTT TACTTTnnTA CAAGGACTTT GATGCATCTT TTGAGAAGAT AGGAAGTATA
GGAGTACTTA CAGGACAACA TGGGGAGATA AGGAAAAATT ACAAGGTGAT CAACTAG
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Retrieve as FASTA
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