Entry information : GmPrx173 (Glyma08g40280.1)
Entry ID 8972
Creation 2011-07-04 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-24 (Christophe Dunand)
Peroxidase information: GmPrx173 (Glyma08g40280.1)
Name (synonym) GmPrx173 (Glyma08g40280.1)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx173
start..stop
S start..stop
GmPrx[P]303 573 0 12..322 12..322
MtPrx91 493 2e-177 5..322 10..327
EgrPrx61 433 8e-154 15..321 21..327
EcamPrx61 431 3e-153 15..321 21..327
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 39982527..39983498 972  
join(39982527..39983498)


exon

Literature and cross-references GmPrx173 (Glyma08g40280.1)
DNA ref. Phytozome 12:   Gm08 (39982527..39983498)
Protein sequence: GmPrx173 (Glyma08g40280.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (307)
PWM (Da):   %s   35496.58 (33481.5)  
PI (pH):   %s   6.98 (6.98) Peptide Signal:   %s   cut: 17 range:17-323
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MFPLFLSLSF FPLIQAQLTT NYYQKTCPKF YDIVRKAVTD KQLSTPTTAG ATLRLFFHDC MVGGCDASVL VTSDSFNKAE RDAAVNLPLS GDGFDAVARA KGALELECPG IASCADTLAA  AAHNLVIAAG GPAFELRLGR KDSLESKATD PENQFPLPTM SMSEVIKIFT SKGFSVQEMV ALVGAHTIGL SHCNQFSQRL FKFNKSSDID PAYNPEYAAG LKKLCENYTK DPSMSAFNDV 
ITPTKFDNMY YKNLRKGMGL LATDSAMFGD SRTRPFVDTY AEDENKFFQD FARAMEKLSV LHVKTGTKGE VRSRCDSFNT LSY* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCCCCC TCTTCCTCTC CCTATCCTTC TTTCCCTTGA TCCAAGCCCA GCTCACCACC AACTACTACC AAAAAACCTG TCCCAAATTC TACGACATCG TCCGAAAAGC CGTCACCGAC  AAGCAGCTCT CGACGCCGAC CACCGCCGGC GCCACGCTCC GCCTCTTCTT CCACGACTGC ATGGTTGGCG GCTGCGACGC CTCCGTCCTC GTCACCTCCG ACTCCTTCAA CAAGGCGGAG  CGTGACGCAG CCGTCAACCT CCCCCTCTCG GGGGACGGGT TCGACGCAGT GGCACGTGCC AAGGGGGCAC TCGAGCTCGA GTGCCCTGGC ATTGCCTCCT GCGCCGACAC CCTCGCAGCG  GCCGCACACA ACCTCGTTAT TGCGGCCGGC GGCCCCGCCT TCGAGCTCCG CCTCGGCCGA AAAGACTCCC TGGAGTCCAA AGCCACAGAC CCCGAAAACC AATTCCCCTT ACCAACCATG  TCAATGTCGG AAGTCATAAA AATCTTCACA TCCAAAGGTT TTTCGGTTCA AGAAATGGTG GCTCTGGTTG GTGCACACAC CATAGGGTTA TCCCACTGCA ACCAATTTTC CCAAAGGCTC  TTCAAATTTA ACAAGAGTTC CGACATTGAC CCTGCGTATA ACCCTGAATA CGCTGCGGGG TTGAAGAAAC TGTGTGAAAA TTACACAAAG GACCCTTCCA TGTCAGCGTT TAACGATGTG  ATAACTCCGA CGAAGTTTGA TAACATGTAT TACAAGAACT TGCGGAAAGG GATGGGGTTG TTGGCCACTG ATAGCGCCAT GTTTGGTGAT TCCAGAACGA GGCCCTTCGT TGACACGTAC  GCGGAGGACG AAAATAAGTT CTTTCAGGAT TTCGCACGTG CCATGGAAAA GCTTAGTGTT TTGCATGTTA AGACTGGTAC AAAAGGAGAG GTGCGGTCGA GGTGTGACTC TTTCAACACG 
CTTAGTTATT GA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCCCCC TCTTCCTCTC CCTATCCTTC TTTCCCTTGA TCCAAGCCCA GCTCACCACC AACTACTACC AAAAAACCTG TCCCAAATTC TACGACATCG TCCGAAAAGC CGTCACCGAC  AAGCAGCTCT CGACGCCGAC CACCGCCGGC GCCACGCTCC GCCTCTTCTT CCACGACTGC ATGGTTGGCG GCTGCGACGC CTCCGTCCTC GTCACCTCCG ACTCCTTCAA CAAGGCGGAG  CGTGACGCAG CCGTCAACCT CCCCCTCTCG GGGGACGGGT TCGACGCAGT GGCACGTGCC AAGGGGGCAC TCGAGCTCGA GTGCCCTGGC ATTGCCTCCT GCGCCGACAC CCTCGCAGCG  GCCGCACACA ACCTCGTTAT TGCGGCCGGC GGCCCCGCCT TCGAGCTCCG CCTCGGCCGA AAAGACTCCC TGGAGTCCAA AGCCACAGAC CCCGAAAACC AATTCCCCTT ACCAACCATG  TCAATGTCGG AAGTCATAAA AATCTTCACA TCCAAAGGTT TTTCGGTTCA AGAAATGGTG GCTCTGGTTG GTGCACACAC CATAGGGTTA TCCCACTGCA ACCAATTTTC CCAAAGGCTC  TTCAAATTTA ACAAGAGTTC CGACATTGAC CCTGCGTATA ACCCTGAATA CGCTGCGGGG TTGAAGAAAC TGTGTGAAAA TTACACAAAG GACCCTTCCA TGTCAGCGTT TAACGATGTG  ATAACTCCGA CGAAGTTTGA TAACATGTAT TACAAGAACT TGCGGAAAGG GATGGGGTTG TTGGCCACTG ATAGCGCCAT GTTTGGTGAT TCCAGAACGA GGCCCTTCGT TGACACGTAC  GCGGAGGACG AAAATAAGTT CTTTCAGGAT TTCGCACGTG CCATGGAAAA GCTTAGTGTT TTGCATGTTA AGACTGGTAC AAAAGGAGAG GTGCGGTCGA GGTGTGACTC TTTCAACACG 
CTTAGTTATT GA 

Retrieve as FASTA