Entry information : GmPrx235 (Glyma13g16590.1)
Entry ID 8994
Creation 2011-07-04 (Qiang Li)
Last sequence changes 2011-11-28 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-16 (Christophe Dunand)
Peroxidase information: GmPrx235 (Glyma13g16590.1)
Name (synonym) GmPrx235 (Glyma13g16590.1)
Class Class III peroxidase    [Orthogroup: Prx022]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx235
start..stop
S start..stop
GmPrx76 633 0 1..330 1..330
GmPrx288 615 0 1..330 1..332
MtPrx09 552 0 1..330 1..330
LjPrx26 549 0 10..330 13..333
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 20514341..20514559 219 N° 2 20513286..20513471 186 N° 3 20512905..20513070 166 N° 4 20511992..20512413 422
complement(join(20511992..20512413,20512905..20513070,20513286..20513471,2051434 1..20514559))


exon

Literature and cross-references GmPrx235 (Glyma13g16590.1)
DNA ref. Phytozome 12:   Gm13 (20514559..20511992)
Protein sequence: GmPrx235 (Glyma13g16590.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (301)
PWM (Da):   %s   35533.51 (32074.8)  
PI (pH):   %s   6.02 (4.95) Peptide Signal:   %s   cut: 30 range:30-330
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKRPFSSSGYHFCLMNMFLLLLAVRSQLTTDFYKSSCPNVSKIVRREVQKALMNEIRMAASLLRLHFHDCFVNGCDGSILLDGGDDGEKSAAPNLNSARGYEVVDTIKSSVESACSGVVSCADILAIAARDSVFLSGGPSWKVLLGRRDGTVSNGTLANEALPSPFDPLDTIISKFTNMGLNLTDVVSLSGAHTIGRARCTLFGNRLFNFSGTGAPDSTLDTDMLSDLQSLCPQNGDGNVTTVLDRNSSDLFDSHYFKNLLSGMGLLSSDQILFSSDEANSTTKPLVQSYSNDSGLFFGDFANSMIKMGNINIKTGTNGEIRKNCRVINS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGCGGCCATTTAGTTCGAGCGGTTATCACTTTTGTCTAATGAATATGTTCCTGTTGCTTTTGGCAGTAAGGTCCCAACTGACAACAGACTTTTATAAATCATCATGTCCTAACGTT
TCCAAAATAGTAAGGAGAGAAGTTCAAAAAGCTCTAATGAATGAGATTCGAATGGCTGCTTCTTTGCTTCGCCTTCACTTTCATGATTGTTTTGTGAAT
GTAAGTTTAATGGTTGTTTTG
TTATATGCATACTTCATGATCAGTCAAATTGTTAGGGATATTGTTATCATTCTTATCCTTGTAACCTACAGAAAATGTTAACAACATACTATCTCTGATACACTTTTTAAAACTANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAATGATAGAAAATGTGTTGG
AGAATATGTTACTAACACATATCTAACCTCAAAGTCCCAAATAATATTGGTAGTAAAGGATTGCAATTTATTCAAAGTTTTAAATTGTAGTCAACAAGTGGTTGCTATATTAAGGGCACA
TTGCATCAACTGCATTTGCATGCAATTGTCCACAATATTAAATTTTTATTGGTCTCTGCAATCACGCGCAAACACAATTTGAAACTTTGATTTGTACTAAAAATATTTTATTGGTGCAAT
TAAAGGGTAGTAAATTGCATGCTTAGATAGATTATGAGTTCTTGTATCAACACAAAGTTGTCAGTAAACTGCACTAAAGAATTTTTAAAAAAAATTATCCAAAGAGAAATTATCGTGTTA
TATCGAAATACTGTTACTAGGTATTCCATATTTCCCATTAATTATGTGACACAGAATCAATAAGTTAGAGCATAACTCAAGCGATTAAGGTATAGGGTGGGGTAGAGATCTTAAGTTCCA
CTCTCATATAAAACATGGAGTAATCACTGAAACTGAAATGCTTATTCTTCCTTCCATCATGGTATAATTATAATCTGATACACCTAATTTTCATTTATATCAATTTGTTTTTGGTCGAAC
ATCATCAGGGTTGTGATGGATCAATACTACTAGATGGTGGTGATGATGGAGAGAAATCTGCTGCTCCTAACCTGAACTCTGCTAGAGGATATGAAGTGGTAGATACAATCAAAAGTTCAG
TGGAGAGTGCATGCAGTGGGGTTGTCTCCTGTGCTGATATATTAGCCATCGCTGCCAGAGATTCTGTTTTCCTA
GTAATTCTATTCAAATCCCATTATTCTCTATATTAATTTTACTTAT
TTCGTTTTCAAGTCGAGGAACATGCACGTGAATGAAATATAACTTACCCAAACAAGTTGTAGAAGTGGTTAACTAGATCTGTCATGTTTTTTATGTACTTCTTCTTAGACAACCAATTTG
GGTTTAGCATAATTACATATATCACTCATAAAGTCACAATGTTTCGTAGAGTGGTGGTCCTTCTTGGAAGGTTCTGCTAGGACGAAGAGATGGAACAGTCTCAAACGGAACACTAGCAAA
TGAGGCGCTTCCTTCGCCATTTGATCCATTAGATACCATCATTTCAAAGTTTACTAATATGGGCCTTAATCTCACAGATGTTGTTTCTTTATCAG
GTAACATATATAGAACTTCACAATC
TATTCAAGCTAGCTAGCTCGTAAACAATTAATCAAGAAAATTATATATAGTTTTTTAGGTGTTGTTCTCCAATTAGAGTTGAAGTTTCACCTTAGTAATCTATATAATAAAGGTATGCAT
TAAAGGATTGTGCAGATTATGAAAGTAAAACTTCAGTTCGGATTGGAGAGCAGCACCCAGAGGGAACTGTATCTAAGTAAAAAGCTTAGATACAGTTTCTCAGGTGTTGCTGGTGTTGTT
CTTCAATTAAAATTGAAGTTTCATCTTAGTAATCTGTGTAATGAAGGTATGCATTAAAGATTTACATAGATTGTCAACATGGAACTTCAATACTGATTAGAGAATTACACCAACAACTCT
TAAGAAACTGTATCTAAGTTTTTTTTCTTAATTTGTTAGCTTAATTGCTTCAATATATATTTATATATATGGTAACTAACATTTGCTAATCCAATTATTTGTGAAGGTGCCCATACTATT
GGCCGAGCAAGGTGTACACTGTTTGGCAATAGATTATTCAACTTCTCAGGAACAGGTGCACCAGACAGTACTCTAGACACAGACATGCTCTCTGACCTGCAAAGTTTGTGTCCTCAAAAT
GGAGATGGAAACGTTACAACAGTCCTTGATCGGAATTCCTCGGATCTATTTGACAGTCACTACTTCAAGAACTTGCTCAGTGGAATGGGCCTTCTCAGTTCTGACCAGATTCTATTTTCT
AGTGATGAAGCTAATTCAACTACTAAACCTTTAGTCCAGAGCTATAGCAACGATAGTGGACTCTTCTTTGGGGACTTTGCCAACTCTATGATCAAGATGGGGAATATCAATATTAAGACT
GGGACTAATGGAGAGATTAGGAAGAACTGCAGAGTGATAAATTCTTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGCGGCCATTTAGTTCGAGCGGTTATCACTTTTGTCTAATGAATATGTTCCTGTTGCTTTTGGCAGTAAGGTCCCAACTGACAACAGACTTTTATAAATCATCATGTCCTAACGTT
TCCAAAATAGTAAGGAGAGAAGTTCAAAAAGCTCTAATGAATGAGATTCGAATGGCTGCTTCTTTGCTTCGCCTTCACTTTCATGATTGTTTTGTGAAT
GGTTGTGATGGATCAATACTA
CTAGATGGTGGTGATGATGGAGAGAAATCTGCTGCTCCTAACCTGAACTCTGCTAGAGGATATGAAGTGGTAGATACAATCAAAAGTTCAGTGGAGAGTGCATGCAGTGGGGTTGTCTCC
TGTGCTGATATATTAGCCATCGCTGCCAGAGATTCTGTTTTCCTA
AGTGGTGGTCCTTCTTGGAAGGTTCTGCTAGGACGAAGAGATGGAACAGTCTCAAACGGAACACTAGCAAATGAG
GCGCTTCCTTCGCCATTTGATCCATTAGATACCATCATTTCAAAGTTTACTAATATGGGCCTTAATCTCACAGATGTTGTTTCTTTATCAG
GTGCCCATACTATTGGCCGAGCAAGGTGT
ACACTGTTTGGCAATAGATTATTCAACTTCTCAGGAACAGGTGCACCAGACAGTACTCTAGACACAGACATGCTCTCTGACCTGCAAAGTTTGTGTCCTCAAAATGGAGATGGAAACGTT
ACAACAGTCCTTGATCGGAATTCCTCGGATCTATTTGACAGTCACTACTTCAAGAACTTGCTCAGTGGAATGGGCCTTCTCAGTTCTGACCAGATTCTATTTTCTAGTGATGAAGCTAAT
TCAACTACTAAACCTTTAGTCCAGAGCTATAGCAACGATAGTGGACTCTTCTTTGGGGACTTTGCCAACTCTATGATCAAGATGGGGAATATCAATATTAAGACTGGGACTAATGGAGAG
ATTAGGAAGAACTGCAGAGTGATAAATTCTTAG

Retrieve as FASTA