1. Browse the Database
  2. View Redoxidase
Entry information : GmPrx236 (Glyma13g20170.1)
Entry ID 8995
Creation 2011-07-04 (Qiang Li)
Last sequence changes 2011-11-28 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-16 (Christophe Dunand)
Peroxidase information: GmPrx236 (Glyma13g20170.1)
Name (synonym) GmPrx236 (Glyma13g20170.1)
Class Class III peroxidase    [Orthogroup: Prx019]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx236
start..stop		 S start..stop
GmPrx41 628 0 4..330 3..328
MtPrx56 547 0 27..329 23..325
LjPrx03 540 0 10..329 7..339
CsPrx04 509 0 14..329 14..329
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8995' 'complement(join(23610743..23611149,23612145..23612310,23612748..23612936,23613049..23613197,23613776..23613854))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 23613776..23613854 77 N° 2 23613049..23613197 147 N° 3 23612748..23612936 187 N° 4 23612145..23612310 164
N° 5 23610743..23611149 405  
complement(join(23610743..23611149,23612145..23612310,23612748..23612936,2361304 9..23613197,23613776..23613854))


exon

Literature and cross-references GmPrx236 (Glyma13g20170.1)
DNA ref. Phytozome 12:   Gm13 (23613854..23610743)
Protein sequence: GmPrx236 (Glyma13g20170.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (300)
PWM (Da):   %s   36785.53 (33490.8) Transmb domain:   %s   i12-29o
PI (pH):   %s   6.5 (6.31) Peptide Signal:   %s   cut: 30 range:30-329
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATTTTQPPSNICFFLLLLLLAHFHLGISQLELNYYSKSCPKAEEIIKEQVTQLYNKHGNTAVSWVRNLFHDCVVKSCDASLLLATVSDVVSEQTSDRSFGMRNFKYVNTIKAAVEKECP
FTVSCADIVALSARDAIALLGGPSIEMKTGRKDSKESYAMEVEDLIPNHNDSMSSVLSRFQAIGIDVEATVALLGAHSVGRVHCKNLVHRLYPTIDSTLDPAHAEYLRRRCPTPNPDPKA
VLYSRNDLKTPMIIDNNYYKNILQHKGLLTVDEELATDPRTASYVQKMANDNEYFNQQFSRAIILLSETNPLTGDEGEIRKDCRYLNAN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns and one extra 5').
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCACCACCACTACCCAGCCTCCCTCTAATATCTGTTTTTTCCTTCTGTTGTTGCTTCTAGCACACTTTCATTTGGGTACGCTAATTATCTAATATTCTACTTACTCTTTCGTTTTT
TCTACGTTCTTTGTAACCTATTACAAAAGACCCTTGTACATATCAGATATAATATAGTATACATCATGAGTTTAATTGCACAATTATTATATATAAAATGACTCTTCAAGTACGTTTAAT
TTACTCAATGATCATGGACATTCCGTATGGATTTGAAGTTGCACTAGTTCTTCTTCAGTAATGGTACATAAACATGTATACATTTAGTTGACTTAATACTTTTTTTTTTTATCATATTAT
ATCACTGTTATATCTATACTTCTCTCTTCTATCTATTTTTTTTTAGTGTATAATAGGACATACATAGGTGTCCAGCTAATGTCCATGTGCACCATTTTCCACTATTCTTCTATGATATAT
AGAGTAATGATATGTTTACATTTTTTATTTCTCTCAATCTTCTTTTTTTTCTTATCATATCATATGTTTTATTATATCTATATATTTTTCTCTTCTTTTCACTATAGGTGTCTAATATCA
CCCCAAGTGTTTATGGATTATTTTCCTAATATATATGATCATGTTGTACATATATAGGCGCATAAGCCAACTTGAGCTGAATTACTACTCTAAAAGCTGCCCAAAAGCTGAAGAGATCAT
CAAGGAACAAGTCACACAACTATATAACAAGCATGGAAACACTGCCGTTTCGTGGGTCAGAAATCTCTTCCACGATTGCGTGGTTAAGGTGCCAGATTTCTTGTTTCAAATTCATATATA
AACCAAGATATATGCATCATAATTAGTTAACAACAATGCATGAAACAGTTAAAATAATTGATTTGATGATTCTCATGCAGTCTCATGCGATGCATCATTACTGTTAGCGACGGTGAGCGA
TGTAGTGTCGGAGCAGACATCGGATAGAAGTTTTGGGATGAGAAACTTCAAGTACGTAAACACTATCAAAGCAGCGGTTGAGAAAGAATGCCCCTTCACAGTGTCATGCGCTGACATTGT
TGCTCTTTCTGCCAGAGATGCCATTGCTTTGGTATGTCTCACTTCTCATCTTGTCTATATATGCACGTCTATAATTATTTCCCTAATTAAATTTCTCACCAAAAATGCCAACAAAATATT
TTTATTATTCTCATAAAAGAATTAAAAATAAAACATTGTAAAAAATATTATCAATACCCTTTGAGTGACCCTGACCTCGGATCCAAGATTCCCAGTTAAATTTCATAGATGAAAATAAAA
GATATTTTATTAAAGATGATCTGACAAAAATTAATCATCTATATGGGGATGATGAAAAAATATCATTAATACATTTTGTGATAATTTTTTATTAATTTCTTTTATTTATTAGTTTATTAA
TTTCGTGTTGTTAATACCTAAAGGACAAATTAACTAATTTCTTAGAGAAATAATTTGAAAAAATGAGGTTTAATGTGGAGTATGGAATATGGATGTTGGTGCGAGCAGTTTTGGGAGGAC
CAAGCATTGAAATGAAGACAGGGAGAAAGGACAGCAAAGAAAGCTATGCAATGGAGGTGGAAGACTTGATTCCAAACCACAATGATTCCATGTCCTCAGTGCTGTCTCGTTTTCAAGCCA
TTGGCATTGACGTTGAAGCCACAGTCGCTCTTTTAGGTATATAAAACATGCTCTGTGTGACACATAAATTTGAAGTCTTTCTCATTATAGTTAACATTTATTTCCCAAAGTCAAAACATA
AATCTAAGTATCTTTTATTACTTAAACGAAACTAATACTCCCTTAAGCAATATATGGACAGATGCCTAACCATTAGGCAGAAACCCAGACACGATATCAATTTGTTGCAGCTGTCAAGAT
CAAGTTCATACTAGGCCACTAATATAAAACTTATTCGTATAATTTATACTTTTTTTGCTAATTAAATTAATATACTGCCTTTATTATATAATATATACAGTTTTAATCTCAATAAAAAAA
ATTAGTCTATTTGTATGCATCTCAAACGGAATTTGTTGAAAGTGAGAATTTTTTCTCCTTTGAAAAAACTTGTCTCCCTCTAACATGTAAAACTCGTTTACATAATTAAAACAAACAGAA
CCTTTTATCATCTATATAAAAAAAAATTGGGCCAATGAATAAAACATAAATATACTACTGGCTAGCTTTGCATGAGTACTATATTAACAAGACAAATCAATAATGATGCATAAATCACTT
TTTATTTTAAACATTAATCAACACTTTTTTTTAATCTTTCTATTATATCATAAATCTTATTATATTTATATTTTTTTTTCTTTTTTAGTTCTACCAAGGAAATGACAAATCTAGAACCCT
AAGTTGTGGGACAATTTATTTTGAAAATAAAAATTAATAATTAATGTTATGAAAGAAATAAAAAAAATAGGACAAGGGATCAAACACACAAAATTAGAGGGGACAAAATTTACACAATCA
ATATATTGAATAACATATTAGATGTGTATTTGCATTTCTCATTATAATATGAATCTTGTCACAGATGTCTATTAAGTATTTTCTCAACCCAAATAGTATTTATACAACCACTATGCATAT
ATATGTGATGTGATAGTTAAAAGATAATAAATTTAATTGGTTAAACCGAAACCGTTTGTTGGTTGATTCAGGAGAGCTCACTCAGTGGGAAGAGTTCACTGCAAGAATCTGGTGCACAGA
TTATACCCCACCATAGATTCAACACTGGACCCTGCACATGCTGAGTACCTAAGACGTCGGTGCCCAACACCCAATCCCGATCCAAAAGCTGTTCTGTATTCAAGGAATGACCTTAAAACG
CCAATGATCATTGACAACAACTACTACAAGAACATCTTGCAACACAAGGGTCTTCTCACTGTGGATGAAGAGCTTGCCACTGACCCAAGAACCGCATCTTATGTCCAAAAGATGGCCAAT
GACAATGAATATTTCAACCAACAGTTCTCAAGGGCCATAATTTTGTTATCGGAGACAAATCCTTTAACAGGAGATGAAGGAGAAATCAGAAAGGATTGTCGCTACCTCAATGCCAATTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCACCACCACTACCCAGCCTCCCTCTAATATCTGTTTTTTCCTTCTGTTGTTGCTTCTAGCACACTTTCATTTGGGCATAAGCCAACTTGAGCTGAATTACTACTCTAAAAGCTGC
CCAAAAGCTGAAGAGATCATCAAGGAACAAGTCACACAACTATATAACAAGCATGGAAACACTGCCGTTTCGTGGGTCAGAAATCTCTTCCACGATTGCGTGGTTAAGTCATGCGATGCA
TCATTACTGTTAGCGACGGTGAGCGATGTAGTGTCGGAGCAGACATCGGATAGAAGTTTTGGGATGAGAAACTTCAAGTACGTAAACACTATCAAAGCAGCGGTTGAGAAAGAATGCCCC
TTCACAGTGTCATGCGCTGACATTGTTGCTCTTTCTGCCAGAGATGCCATTGCTTTGTTGGGAGGACCAAGCATTGAAATGAAGACAGGGAGAAAGGACAGCAAAGAAAGCTATGCAATG
GAGGTGGAAGACTTGATTCCAAACCACAATGATTCCATGTCCTCAGTGCTGTCTCGTTTTCAAGCCATTGGCATTGACGTTGAAGCCACAGTCGCTCTTTTAGGAGCTCACTCAGTGGGA
AGAGTTCACTGCAAGAATCTGGTGCACAGATTATACCCCACCATAGATTCAACACTGGACCCTGCACATGCTGAGTACCTAAGACGTCGGTGCCCAACACCCAATCCCGATCCAAAAGCT
GTTCTGTATTCAAGGAATGACCTTAAAACGCCAATGATCATTGACAACAACTACTACAAGAACATCTTGCAACACAAGGGTCTTCTCACTGTGGATGAAGAGCTTGCCACTGACCCAAGA
ACCGCATCTTATGTCCAAAAGATGGCCAATGACAATGAATATTTCAACCAACAGTTCTCAAGGGCCATAATTTTGTTATCGGAGACAAATCCTTTAACAGGAGATGAAGGAGAAATCAGA
AAGGATTGTCGCTACCTCAATGCCAATTAG

Retrieve as FASTA