Entry information : GmPrx270 (Glyma15g41280.1)
Entry ID 9007
Creation 2011-07-04 (Qiang Li)
Last sequence changes 2011-10-12 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-12-13 (Qiang Li)
Peroxidase information: GmPrx270 (Glyma15g41280.1)
Name (synonym) GmPrx270 (Glyma15g41280.1)
Class Class III peroxidase    [Orthogroup: Prx022]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx270
start..stop
S start..stop
GmPrx168 685 0 1..384 1..383
MtPrx82 579 0 5..384 7..389
PpePrx50 472 3.96e-168 61..380 8..343
VvPrx90 467 1.58e-165 13..384 13..375
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9007' 'complement(join(48406385..48406848,48407296..48407461,48408211..48408408,48408917..48409243))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 48408917..48409243 325 N° 2 48408211..48408408 196 N° 3 48407296..48407461 164 N° 4 48406385..48406848 462
complement(join(48406385..48406848,48407296..48407461,48408211..48408408,4840891 7..48409243))


exon

Literature and cross-references GmPrx270 (Glyma15g41280.1)
DNA ref. Phytozome 12:   Gm15 (48409243..48406385)
Protein sequence: GmPrx270 (Glyma15g41280.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   384 (338)
PWM (Da):   %s   42522.1 (35814.9)  
PI (pH):   %s   5.09 (7.62) Peptide Signal:   %s   cut: 25 range:25-362
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRSCINLWIVAALVIPVLLTLRSPRGETQTQTQTTSSFSDSSTFS
VKLANSFPFNQRIRDGSNLEYDFYMDTCPQAEGVVRSALTRIYFDHRDVAPALLRLFFHDCFIE
GCDASLLLDENNGDRNLSVEKQAVPNQTLRGFDKIDLIKEEVEQACPGVVSCADILALAARDSIVLAGGPFYPVLTGRRDSHQSFFEEATDQIPRPDDNVTRTLNLFNLRGFNARETVSL
L
GGHNIGKIGCDFIQQRLYNFQGTGQPDPSIPLDFLRQMRLNCPDSKNSSTSVDEFTISKMGMSYMQALSSSVSSGASFDTHYYQSLLRGRGLLFADQQLMAEEKTARLVSAYASDDGST
FRMDFARVMLKMSNLDVLTGLQGQVRVNCSLPVSS

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from phytozome (5' end is missing, short PS at 3' end is missing). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGAAGCTGCATCAACCTCTGGATCGTGGCGGCACTCGTCATCCCCGTGCTCCTCACTCTCAGAAGCCCTCGAGGCGAAACCCAAACCCAAACCCAAACCACTTCTTCTTTCTCCGAT
TCTTCTACCTTCTCCGTGAAGCTTGCGAACTCATTTCCATTCAACCAAAGGATCCGAGATGGGTCGAATCTCGAATACGACTTCTACATGGATACGTGTCCCCAAGCGGAGGGTGTTGTT
CGTTCGGCGCTCACTCGCATCTACTTCGACCACAGGGACGTTGCACCTGCTCTTCTTCGTCTCTTCTTCCACGATTGCTTCATCGAG
GTCCTTCTTTTTTCTTTTGTTGGGTTGCTTGTT
TTTTGATAAAATTTTGTGTTTTGTGTTGAAACAGAAAATGGGGTGTTTTTTGTTTTTCCGTTTCTTGGTCTCAAGACCGTGAATTTGGAGTCTTTGTTGTGTTTATTCAAATGGGTGTTT
CTTGATTACTTGGGTTTTTCTTTTGGTTTTTTTAGCTTTTCTTGATTCGTTATTCGTCTCTGCTTTTTGTACTTGGAATATGAATCATGAATATCCTAAATTTCGATCATGATCTTGTGC
TATTGTATAGATCGTTGATTTTCACTTTTTCTTTATAGAGAATTTTGATTTGTGTAAAAACCCTTATACTGTCAATTAGTTAGAAAATAATTTAGATAAGTAATTATTAAGAAGGTTAAT
AATCGTACCATACATGTTAATTTTTGATTGGATGACATTTTGATTAAACTGTTTTCTATGCATGTAAACGATCTCTTATTGACTTTATGTTGCATTTGGGGTGTTGATGAATCAGGGGGG
TGTGATGCTTCGTTGCTGTTGGATGAGAACAATGGTGATAGAAACCTTTCCGTGGAGAAGCAGGCCGTGCCGAATCAGACATTGAGAGGTTTTGACAAAATTGACTTGATCAAGGAAGAG
GTGGAGCAAGCATGTCCCGGGGTTGTGTCTTGTGCTGACATACTTGCTCTTGCAGCAAGAGATTCCATTGTTTTG
GTACATATTTCTTTGTTTCCAATTAACTTGGGTCTATACCGTATC
TTGAGTTTCAGTTTATGTTGATAGTTTAGGATTTGTTATTCTGATTGTAGTATGATAGCAGATAGAGTTTTTGGATGTTAAATTGAAGATCTGAATTCTGATGCATTTTGACTTTAATTG
CAAGTTTGGAACACTTGTAATGCATTGCTTGGTCCTGCTTCTCTATCCTGAAACTTATTAGCCATCAAAATAATATACCAAAATGTAAAACAATAGTGATGTTTTCATAATATTTCTGGA
ATAGTTTATACTTAATTACTTTTGTTTTTCTTTTCTGAAATACCATCTTTTACTAGCCAGAGAGTGATGGTAAGTTGTTCCTTTTCATGATATCTTTCTCACCCGTTTGTTGTATTAGTA
AAGCCAGTTATAAACAAGTTTACTAAATTGTTTGAATTCAACTTTGTTTATATTCTCTTTCCTACAACTGCTTGTTGGTTTGTTGCAAGTTTGTCTTGACTTGTTTGCTTTCTCTCTCTT
AATGTCACTTTTGTGCTTGTTCAATCATGTGTCTAGATAGATATTATCCATGTCCTGGATAAGATAAGCAAGTGCATAATTTTTCCTTGAATTCAGGCATATTGATATTATGATTTGGGG
CAGCCAAGTCTTCAAGAATATTCACTTTTGCTGTATGTATATCACACTTCATAGAAGTTCAGCATCATTGTACTTATGATATTTTTTGTGGATCTCCATTGTAGGCGCTGGTGGACCTTT
CTATCCAGTTTTAACAGGCAGAAGGGATAGCCATCAATCATTTTTCGAGGAAGCAACTGATCAGATTCCCAGACCTGATGATAACGTTACACGCACACTTAATCTCTTCAATCTCAGAGG
ATTTAATGCAAGAGAAACAGTCAGCCTTCTTG
GTACTCACTCAATACATTTCTTGTATCAGTCTAAATGTATTTTTTGTCCCTTTGTTTTTCATCTAGTTCCCCATTCTTAATAAGTTGT
AATCTAGTCCTCATCATTTTTTTGTTACTTCCTTTATATAGTCTCACAGTCTCACTATTATTTCTTTTGTTTATTTTGTCCACTAAGCGTTGGTTTTGCTTGCATTTTGGTCACTCCAAA
TATTATTAGGAGACCAAATGAAAATTTATTATCAGTAGGATAAAAAAGTAAGCAAAGCCTACAATTAATGTCATGTGATCCATAAAGTCTTTTGATCATTAACCGGCCAGATTGCNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGGTTTTCAATGTCATCATCCATGAATAGAATCTGACTAATGGTGTGAAGG
AGAGGACACAACATTGGCAAAATCGGTTGTGACTTCATTCAGCAAAGGCTGTACAACTTTCAAGGCACAGGACAGCCAGACCCCAGCATCCCCCTTGATTTCCTTCGTCAGATGAGGCTA
AACTGCCCAGATAGCAAGAACAGCAGCACAAGTGTAGACGAGTTTACGATCTCCAAAATGGGGATGTCATACATGCAAGCACTCTCATCTTCAGTTTCATCAGGAGCATCATTTGACACT
CACTACTACCAGAGCCTGCTAAGAGGAAGAGGGCTTCTTTTCGCCGATCAGCAGCTGATGGCCGAGGAGAAAACCGCTAGATTGGTCTCTGCTTATGCTTCAGATGATGGATCAACCTTT
CGCATGGACTTTGCCAGGGTCATGTTGAAAATGTCTAACCTTGATGTTCTCACTGGACTTCAAGGCCAGGTTCGAGTCAATTGCTCACTACCTGTGTCTTCTTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGAAGCTGCATCAACCTCTGGATCGTGGCGGCACTCGTCATCCCCGTGCTCCTCACTCTCAGAAGCCCTCGAGGCGAAACCCAAACCCAAACCCAAACCACTTCTTCTTTCTCCGAT
TCTTCTACCTTCTCCGTGAAGCTTGCGAACTCATTTCCATTCAACCAAAGGATCCGAGATGGGTCGAATCTCGAATACGACTTCTACATGGATACGTGTCCCCAAGCGGAGGGTGTTGTT
CGTTCGGCGCTCACTCGCATCTACTTCGACCACAGGGACGTTGCACCTGCTCTTCTTCGTCTCTTCTTCCACGATTGCTTCATCGAG
GGGTGTGATGCTTCGTTGCTGTTGGATGAGAAC
AATGGTGATAGAAACCTTTCCGTGGAGAAGCAGGCCGTGCCGAATCAGACATTGAGAGGTTTTGACAAAATTGACTTGATCAAGGAAGAGGTGGAGCAAGCATGTCCCGGGGTTGTGTCT
TGTGCTGACATACTTGCTCTTGCAGCAAGAGATTCCATTGTTTTG
GCTGGTGGACCTTTCTATCCAGTTTTAACAGGCAGAAGGGATAGCCATCAATCATTTTTCGAGGAAGCAACTGAT
CAGATTCCCAGACCTGATGATAACGTTACACGCACACTTAATCTCTTCAATCTCAGAGGATTTAATGCAAGAGAAACAGTCAGCCTTCTTG
GAGGACACAACATTGGCAAAATCGGTTGT
GACTTCATTCAGCAAAGGCTGTACAACTTTCAAGGCACAGGACAGCCAGACCCCAGCATCCCCCTTGATTTCCTTCGTCAGATGAGGCTAAACTGCCCAGATAGCAAGAACAGCAGCACA
AGTGTAGACGAGTTTACGATCTCCAAAATGGGGATGTCATACATGCAAGCACTCTCATCTTCAGTTTCATCAGGAGCATCATTTGACACTCACTACTACCAGAGCCTGCTAAGAGGAAGA
GGGCTTCTTTTCGCCGATCAGCAGCTGATGGCCGAGGAGAAAACCGCTAGATTGGTCTCTGCTTATGCTTCAGATGATGGATCAACCTTTCGCATGGACTTTGCCAGGGTCATGTTGAAA
ATGTCTAACCTTGATGTTCTCACTGGACTTCAAGGCCAGGTTCGAGTCAATTGCTCACTACCTGTGTCTTCTTAA

Retrieve as FASTA