Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
384 (338) |
PWM (Da): |
42522.1 (35814.9) |
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PI (pH): |
5.09 (7.62) |
Peptide Signal: |
cut: 25 range:25-362 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MRSCINLWIVAALVIPVLLTLRSPRGETQTQTQTTSSFSDSSTFS VKLANSFPFNQRIRDGSNLEYDFYMDTCPQAEGVVRSALTRIYFDHRDVAPALLRLFFHDCFIEGCDASLLLDENNGDRNLSVEKQAVPNQTLRGFDKIDLIKEEVEQACPGVVSCADILALAARDSIVLAGGPFYPVLTGRRDSHQSFFEEATDQIPRPDDNVTRTLNLFNLRGFNARETVSL LGGHNIGKIGCDFIQQRLYNFQGTGQPDPSIPLDFLRQMRLNCPDSKNSSTSVDEFTISKMGMSYMQALSSSVSSGASFDTHYYQSLLRGRGLLFADQQLMAEEKTARLVSAYASDDGST FRMDFARVMLKMSNLDVLTGLQGQVRVNCSLPVSS |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic. Incorrect prediction from phytozome (5' end is missing, short PS at 3' end is missing). No EST. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCGAAGCTGCATCAACCTCTGGATCGTGGCGGCACTCGTCATCCCCGTGCTCCTCACTCTCAGAAGCCCTCGAGGCGAAACCCAAACCCAAACCCAAACCACTTCTTCTTTCTCCGAT TCTTCTACCTTCTCCGTGAAGCTTGCGAACTCATTTCCATTCAACCAAAGGATCCGAGATGGGTCGAATCTCGAATACGACTTCTACATGGATACGTGTCCCCAAGCGGAGGGTGTTGTT CGTTCGGCGCTCACTCGCATCTACTTCGACCACAGGGACGTTGCACCTGCTCTTCTTCGTCTCTTCTTCCACGATTGCTTCATCGAGGTCCTTCTTTTTTCTTTTGTTGGGTTGCTTGTT TTTTGATAAAATTTTGTGTTTTGTGTTGAAACAGAAAATGGGGTGTTTTTTGTTTTTCCGTTTCTTGGTCTCAAGACCGTGAATTTGGAGTCTTTGTTGTGTTTATTCAAATGGGTGTTT CTTGATTACTTGGGTTTTTCTTTTGGTTTTTTTAGCTTTTCTTGATTCGTTATTCGTCTCTGCTTTTTGTACTTGGAATATGAATCATGAATATCCTAAATTTCGATCATGATCTTGTGC TATTGTATAGATCGTTGATTTTCACTTTTTCTTTATAGAGAATTTTGATTTGTGTAAAAACCCTTATACTGTCAATTAGTTAGAAAATAATTTAGATAAGTAATTATTAAGAAGGTTAAT AATCGTACCATACATGTTAATTTTTGATTGGATGACATTTTGATTAAACTGTTTTCTATGCATGTAAACGATCTCTTATTGACTTTATGTTGCATTTGGGGTGTTGATGAATCAGGGGGG TGTGATGCTTCGTTGCTGTTGGATGAGAACAATGGTGATAGAAACCTTTCCGTGGAGAAGCAGGCCGTGCCGAATCAGACATTGAGAGGTTTTGACAAAATTGACTTGATCAAGGAAGAG GTGGAGCAAGCATGTCCCGGGGTTGTGTCTTGTGCTGACATACTTGCTCTTGCAGCAAGAGATTCCATTGTTTTGGTACATATTTCTTTGTTTCCAATTAACTTGGGTCTATACCGTATC TTGAGTTTCAGTTTATGTTGATAGTTTAGGATTTGTTATTCTGATTGTAGTATGATAGCAGATAGAGTTTTTGGATGTTAAATTGAAGATCTGAATTCTGATGCATTTTGACTTTAATTG CAAGTTTGGAACACTTGTAATGCATTGCTTGGTCCTGCTTCTCTATCCTGAAACTTATTAGCCATCAAAATAATATACCAAAATGTAAAACAATAGTGATGTTTTCATAATATTTCTGGA ATAGTTTATACTTAATTACTTTTGTTTTTCTTTTCTGAAATACCATCTTTTACTAGCCAGAGAGTGATGGTAAGTTGTTCCTTTTCATGATATCTTTCTCACCCGTTTGTTGTATTAGTA AAGCCAGTTATAAACAAGTTTACTAAATTGTTTGAATTCAACTTTGTTTATATTCTCTTTCCTACAACTGCTTGTTGGTTTGTTGCAAGTTTGTCTTGACTTGTTTGCTTTCTCTCTCTT AATGTCACTTTTGTGCTTGTTCAATCATGTGTCTAGATAGATATTATCCATGTCCTGGATAAGATAAGCAAGTGCATAATTTTTCCTTGAATTCAGGCATATTGATATTATGATTTGGGG CAGCCAAGTCTTCAAGAATATTCACTTTTGCTGTATGTATATCACACTTCATAGAAGTTCAGCATCATTGTACTTATGATATTTTTTGTGGATCTCCATTGTAGGCGCTGGTGGACCTTT CTATCCAGTTTTAACAGGCAGAAGGGATAGCCATCAATCATTTTTCGAGGAAGCAACTGATCAGATTCCCAGACCTGATGATAACGTTACACGCACACTTAATCTCTTCAATCTCAGAGG ATTTAATGCAAGAGAAACAGTCAGCCTTCTTGGTACTCACTCAATACATTTCTTGTATCAGTCTAAATGTATTTTTTGTCCCTTTGTTTTTCATCTAGTTCCCCATTCTTAATAAGTTGT AATCTAGTCCTCATCATTTTTTTGTTACTTCCTTTATATAGTCTCACAGTCTCACTATTATTTCTTTTGTTTATTTTGTCCACTAAGCGTTGGTTTTGCTTGCATTTTGGTCACTCCAAA TATTATTAGGAGACCAAATGAAAATTTATTATCAGTAGGATAAAAAAGTAAGCAAAGCCTACAATTAATGTCATGTGATCCATAAAGTCTTTTGATCATTAACCGGCCAGATTGCNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGGTTTTCAATGTCATCATCCATGAATAGAATCTGACTAATGGTGTGAAGG AGAGGACACAACATTGGCAAAATCGGTTGTGACTTCATTCAGCAAAGGCTGTACAACTTTCAAGGCACAGGACAGCCAGACCCCAGCATCCCCCTTGATTTCCTTCGTCAGATGAGGCTA AACTGCCCAGATAGCAAGAACAGCAGCACAAGTGTAGACGAGTTTACGATCTCCAAAATGGGGATGTCATACATGCAAGCACTCTCATCTTCAGTTTCATCAGGAGCATCATTTGACACT CACTACTACCAGAGCCTGCTAAGAGGAAGAGGGCTTCTTTTCGCCGATCAGCAGCTGATGGCCGAGGAGAAAACCGCTAGATTGGTCTCTGCTTATGCTTCAGATGATGGATCAACCTTT CGCATGGACTTTGCCAGGGTCATGTTGAAAATGTCTAACCTTGATGTTCTCACTGGACTTCAAGGCCAGGTTCGAGTCAATTGCTCACTACCTGTGTCTTCTTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCGAAGCTGCATCAACCTCTGGATCGTGGCGGCACTCGTCATCCCCGTGCTCCTCACTCTCAGAAGCCCTCGAGGCGAAACCCAAACCCAAACCCAAACCACTTCTTCTTTCTCCGAT TCTTCTACCTTCTCCGTGAAGCTTGCGAACTCATTTCCATTCAACCAAAGGATCCGAGATGGGTCGAATCTCGAATACGACTTCTACATGGATACGTGTCCCCAAGCGGAGGGTGTTGTT CGTTCGGCGCTCACTCGCATCTACTTCGACCACAGGGACGTTGCACCTGCTCTTCTTCGTCTCTTCTTCCACGATTGCTTCATCGAGGGGTGTGATGCTTCGTTGCTGTTGGATGAGAAC AATGGTGATAGAAACCTTTCCGTGGAGAAGCAGGCCGTGCCGAATCAGACATTGAGAGGTTTTGACAAAATTGACTTGATCAAGGAAGAGGTGGAGCAAGCATGTCCCGGGGTTGTGTCT TGTGCTGACATACTTGCTCTTGCAGCAAGAGATTCCATTGTTTTGGCTGGTGGACCTTTCTATCCAGTTTTAACAGGCAGAAGGGATAGCCATCAATCATTTTTCGAGGAAGCAACTGAT CAGATTCCCAGACCTGATGATAACGTTACACGCACACTTAATCTCTTCAATCTCAGAGGATTTAATGCAAGAGAAACAGTCAGCCTTCTTGGAGGACACAACATTGGCAAAATCGGTTGT GACTTCATTCAGCAAAGGCTGTACAACTTTCAAGGCACAGGACAGCCAGACCCCAGCATCCCCCTTGATTTCCTTCGTCAGATGAGGCTAAACTGCCCAGATAGCAAGAACAGCAGCACA AGTGTAGACGAGTTTACGATCTCCAAAATGGGGATGTCATACATGCAAGCACTCTCATCTTCAGTTTCATCAGGAGCATCATTTGACACTCACTACTACCAGAGCCTGCTAAGAGGAAGA GGGCTTCTTTTCGCCGATCAGCAGCTGATGGCCGAGGAGAAAACCGCTAGATTGGTCTCTGCTTATGCTTCAGATGATGGATCAACCTTTCGCATGGACTTTGCCAGGGTCATGTTGAAA ATGTCTAACCTTGATGTTCTCACTGGACTTCAAGGCCAGGTTCGAGTCAATTGCTCACTACCTGTGTCTTCTTAA |
Retrieve as FASTA
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