View Redoxidase 9008

Entry information : GmPrx272 (Glyma16g06030.1)

Entry ID	9008
Creation	2011-07-04 (Qiang Li)
Last sequence changes	2011-11-28 (Qiang Li)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2015-12-16 (Christophe Dunand)

Peroxidase information: GmPrx272 (Glyma16g06030.1)

Name (synonym)

GmPrx272 (Glyma16g06030.1)

Class

Class III peroxidase [Orthogroup: Prx031]

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Glycine

Organism

Glycine max (soybean) [TaxId: 3847 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	GmPrx272 start..stop	S start..stop
GmPrx56	624	0	1..327	1..328
MtPrx41	503	0	1..325	1..320
CclPrx43	488	8.89e-176	5..325	4..324
CsPrx20	485	1.6e-174	5..325	6..326

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9008' 'complement(join(5480919..5481494,5482879..5483070,5484188..5484400))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	5484188..5484400	211	N° 2	5482879..5483070	190	N° 3	5480919..5481494	574
complement(join(5480919..5481494,5482879..5483070,5484188..5484400))

Literature and cross-references GmPrx272 (Glyma16g06030.1)

DNA ref.	Phytozome 12: Gm16 (5484400..5480919)

Protein sequence: GmPrx272 (Glyma16g06030.1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	326 (302)
PWM (Da):	34881.28 (32125.9)
PI (pH):	4.54 (4.43)	Peptide Signal:	cut: 25 range:25-326

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MEKSMRMVLMALLAFTMLLSKGEGQLVENFYSLSCPNVESIVKQAVTNKFTQTITTGQATLRLFFHDCFVEGCDASVIISSPNGDAEKDAEENISLPGDGFDTVIKAKQAVESSCPGVVS
CADILALATRDVIGLLGGPSFNVELGRKDGLISKASSVEGNLPKANFNLDQLNALFSKHGLSQTDMIALSGAHTVGFSHCDQFANRLYSFSSSNTVDPTLDPSYAQDLMAGCPRNPDPTV
AVALDPQSPAAFDNLYYQNLLSGKGLLTSDQVLFEDATSQPTVVRFANNVADFNDAFVAAIRKLARVGVKTGNDGEIRRDCTTFNS*

Retrieve as FASTA

Remarks

Complete sequence from genomic (introns 1 and 2). Incorrect prediction from phytozome (Short 5' end is missing).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGAGAAAAGCATGAGGATGGTATTAATGGCTTTGTTGGCTTTCACGATGCTTTTATCTAAGGGTGAAGGCCAATTAGTAGAGAATTTCTACAGTTTATCTTGTCCAAACGTGGAATCC
ATCGTGAAACAAGCAGTGACTAACAAGTTTACACAGACCATTACAACTGGACAAGCAACTCTGCGTCTCTTTTTCCATGATTGCTTTGTTGAGGTGTGTTCTTCAATTCTTATAATGTTT
CTTTATTTCTTCACTTGTGTACTCGTGTGTATATGATATGATTTTTCAGTTTCAAGTTTTGTTTTTATAAAAAAAATATATACATTCATCATGGTCGATTAAAGGATAAAACAATTAAAA
CATAAACTTTAAGCCCTTTAACAAAAATATATTTCCTTTTAGTTTTTATAAAGCACAAAATGTCGCATTTATTAGAAAAAAAAAGACTATTTTTTATTAAAAATAAAATTTTTACCTTAA
AATTTATTTTAAATCTCATTTGACATTAGGTCAGCCCTAGCTCCATATCTATGGTTGTTCGTTTCCTTCCTCTGATAATGAGCATGCATTTTCTAGACATGATAGTTTCCCTGAGTTTGC
TCTCTCTCTCTTTTAAAATTTCATATATGAAGTTGAACTTTCAAAATATATGATCGTGACTTTTCTGGCTGGTGGAGGCTTATTCTTCTTTTTGCAATTTCGCTTGGAATGGTAATATGG
TATGCGCCACTTTCTATTCTGTGTGTGGAAATAATAATGATAATATGATGCGAGTGAGACCTAGAAGCTGTTTGGATAAGCTTTTTAAATATTTCTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCAAACAGACCCGTAGTCACATACCACACACAACTTCACGCCTTTGGTGCCTACCTAGATTATTAAA
AAAATAAAAAATCATTGACTACGAGGTATATGCGACAATCCTATTAGTTGATGTGTTGTTAACTTTTGACCAGCTACAGTTATCACAGGAACATGCTAAAAACATTGATCAAGAACCCAT
TCTATTTCATTCAGGAAATAAAATTACAGCAATGTTAACCAAAAGGGCAATTAAACATGAGATCCACAAAATTGGTGATTGTGAAAATTGGCTTGACTATTCTTATGAAAAATGAATTTT
GATGGTGTAGGGGGTTGTGATGCCTCAGTGATAATCTCGTCGCCAAATGGGGACGCAGAGAAGGATGCAGAGGAGAATATTTCACTACCAGGAGATGGGTTTGACACTGTCATCAAGGCA
AAGCAAGCAGTGGAATCTTCATGTCCTGGAGTGGTTTCATGTGCAGACATTTTGGCACTTGCTACCAGAGACGTTATAGGCTTGGTAAGCAAATATTAATTATTAATTTAACATACATAT
ACCCCAAAAGTAAAATCAATTCATTTCATTAATTTAAAGTTTAAAACGATAAGAGTTTGTCTTTTTATGTTTACCATCTGCTGCAAGAATTTGACTACATCGATCCGTTCTCCAATTCTC
TGGCAATGCATCATCAAGTTTTCTTTTTTTTATTAAGAATATTTACACATTCTTTCATATTCCCTCTTCAACACTTGCTCTGATATTCAATGAAATTTTATGTTATCCTTACGTAATGAT
AGAGATTTTGCCCAATAGTAGAAGAAATGTTTTGTAAAAGTAAACAAAAAATTATTACGAGTGCATGTTATATTAAATTCGGCCCTATCCACATCTAACTCAATCAGGATATATTAGTAA
TTTAGTCATTATCGAACTGGTTAAATCACGTTATAATAGTATTTAAGTATGTTATATATATAATGATCAAAATTATTTTTTTCTGCTAATCATTACACTATTATATATAAATTTGGTCCA
AATATAAAAATGTATATAAAGATTTTTATATTATCGTTTATCAACTAATTAAAACTTAATTAAGAAATATATAATTTTCAAAATAGTTATTAAAAAAATTGATGATTTTATCATATATGA
TAAAGGAGAAAATTGATTTTGAACCCTCAAAATATTTTGAAATTTAGATTAATTTAATCCCATAAAGTCAATTCATTTCATTAATTTAAAGTTAAAATAGTATGATTTTTATGTTTGCAC
TATCATTTAATAATGTGGTACACGAATTTGACTACATCCGGTGGTTGTCCAATTCTGTAGCAACACATCATTAAGTTTTCTTTTTGTTAATATAATTACACACTCTTTCATTTTCTCTCT
CTTCAACACTTAGTTCTCTGCATGATATTAAATGAAAATTTTGTTATCCTTACGTAATGATAAGAGATTTTGCCCAATAGTAGAAGAAATGTTTTACAAAGTAAAAAAAGAAATTATATT
GTGAGCATTATTAAATTCGGCCAGATCAACATCTAACTCAACCAGGATATTATTATTAGTAATTAAGTCATTAATCAAACTGGTTAAACCACTATATATATAATGCTAAAAATACATTTT
TTCTGATGAGTGGCTGCTAAATATTAAACTATTATTTATAAAATTGGTTCAATCATAAAAACTAATTAAGATTTTTATATTATTAACTAATTAGAAATTCTGAAATAAAAACTAATTAGA
AATTAAGAAACATATATGTTTCAAAATAATTACTATAAAACATATATTCAATGTGGACGTACAATACTTTAAATTTAAATTGAATGTCAAATATTTATATAGTTAACAAATAATAACACT
TGTGTTGGTGACTTTAAAACTATCTCAGCTCTTGGAGGTCCTTCATTCAACGTAGAGCTTGGACGCAAAGACGGGCTTATTTCCAAGGCATCAAGTGTAGAAGGAAACCTTCCGAAAGCA
AACTTCAATTTGGACCAACTCAACGCGCTTTTCTCAAAGCACGGCCTCAGCCAAACGGACATGATAGCGTTATCTGGGGCCCACACAGTGGGCTTCTCGCACTGTGACCAGTTCGCGAAC
CGTTTATATTCCTTCTCGTCCTCCAACACGGTGGACCCCACTCTGGACCCCAGTTACGCCCAGGACCTAATGGCGGGGTGCCCTAGGAACCCCGACCCCACTGTAGCGGTTGCCCTGGAC
CCACAATCCCCTGCGGCCTTCGACAACTTGTATTACCAAAACCTGCTGTCGGGGAAAGGGTTGCTAACCTCAGACCAGGTTCTGTTCGAGGATGCCACGTCACAACCAACTGTTGTTAGG
TTCGCCAACAACGTTGCGGATTTTAACGATGCCTTTGTCGCAGCCATCAGGAAGCTTGCAAGGGTTGGGGTCAAGACTGGGAATGATGGAGAGATTCGGAGAGATTGCACCACATTCAAT
TCTTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA