1. Browse the Database
  2. View Redoxidase
Entry information : GmPrx274 (Glyma16g24640.1)
Entry ID 9010
Creation 2011-07-04 (Qiang Li)
Last sequence changes 2011-11-28 (Qiang Li)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-12-16 (Achraf Jemmat)
Peroxidase information: GmPrx274 (Glyma16g24640.1)
Name (synonym) GmPrx274 (Glyma16g24640.1)
Class Class III peroxidase     [Orthogroup: Prx004]*
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx274
start..stop		 S start..stop
GmPrx[P]99 497 1.37e-179 15..317 1..304
GmPrx27 498 2.05e-179 1..327 1..332
GmPrx273 493 1.75e-177 1..327 1..332
RcPrx17 478 2.69e-171 1..326 1..331
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9010' 'complement(join(28594625..28595040,28595471..28595636,28595948..28596139,28596389..28596595))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 28596389..28596595 205 N° 2 28595948..28596139 190 N° 3 28595471..28595636 164 N° 4 28594625..28595040 414
complement(join(28594625..28595040,28595471..28595636,28595948..28596139,2859638 9..28596595))


exon

Literature and cross-references GmPrx274 (Glyma16g24640.1)
DNA ref. Phytozome 12:   Gm16 (28596595..28594625)
Protein sequence: GmPrx274 (Glyma16g24640.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (304)
PWM (Da):   %s   36102.98 (33651.7)  
PI (pH):   %s   5.38 (5.38) Peptide Signal:   %s   cut: 23 range:23-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVNSMSFLLLLSLLAFAPLCLCNLNPQFYDNSCPQAQQIAKSILTSYFVIQPGYAAQILRLHFHDCFVMGCDGSLLLDSSESIVSEKESDPNRDSARGFIVIDAIKLAIERACPSTVSCA
DILTIAARDSVVLTGGPSWEVPLGRRDSRDASISGSNNNIPAPNSIFPTLQTKFEQQGLNLTDLVTLSGAHTLGVARCTNFRQRLYNQSGNGQPDPTLDQNYAAFLRVTCPRTTLGDQNP
FFLDYATPLKFDNSYFKNLMENKGLLNSDQILFTMNQESAELVRLYAERNDLFFEQFSKSMIKMGNISPLTNSSGEIRQNCRRVNA*

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns). No EST. Incorrect prediction from phytozome (=>short PS is missing).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTCAATTCCATGAGCTTTCTCCTGCTTCTTTCTTTACTAGCCTTTGCTCCCTTGTGCCTCTGTAACCTCAACCCTCAGTTTTATGACAATTCATGCCCTCAAGCTCAGCAAATTGCC
AAGTCCATTCTTACCTCGTATTTTGTAATTCAACCCGGATATGCGGCTCAAATTCTCAGGCTTCATTTCCATGATTGTTTTGTCATGGTCTCTCCCTATGACTTGCCAACAGAATTAGTG
GTTTATTGCACAACAACATCACATTATTAACATTGTAGTATCATAAATAATTATATGATGTTAGTACTTAGTTTTATTGGTAACATAGTTGTATTATCATGTGATTGATCGATGTTAATA
CTTAGTACTTAGTCTTATTGGTAAACATATAATAGTTAATTATGTTATATCCAGTAGTTGTTTATTCAAATGCTTAATTCCAAGTTGATGTTGTAGGGGGATGTGATGGTTCATTGTTGT
TAGATAGCAGTGAAAGCATCGTCAGTGAGAAGGAATCAGATCCCAACCGTGATTCAGCTAGAGGATTTATAGTCATTGATGCAATTAAACTGGCGATAGAGAGAGCATGCCCTTCTACAG
TGTCTTGTGCTGACATCTTGACTATAGCTGCAAGAGATTCAGTTGTTCTTGTAAGTATCTTATTATGAGAGATTCAGTTAATTGGTTTGAAAAAATGTTTTATATTTTTTTTTTAATTAC
AAAAATACTATAAAAGTTTGTGCATCAAATAGTAAAATAAGTTTAATTTTTTTTTCCAGTTTTCCATACAAACATAAAATAAAGTAAAACAAAATGATATTTTTGTAATTAAAAGTGGAA
ATAAAAAATAAAAAAACAGAAAATGTTTTTTCAAATTAAACTGTTTCTAATTAACCTTTCATTATCAAGACTTTGTCATTTTTATCAAGCCTGAATCACTATATATCTCTTTTATGTATA
GACACTGGTGGACCAAGCTGGGAAGTACCCTTAGGCAGAAGGGACTCTCGAGATGCAAGCATAAGTGGCTCCAACAACAACATTCCAGCCCCAAATAGCATATTTCCGACCCTCCAAACA
AAATTCGAGCAACAGGGGCTTAACCTTACTGATCTAGTTACTCTATCGGGTATTCTCCTAAAATTTGTCTGTTTCAAATTCTTTTTAGATAAATTTTTCTAAAAATACATATAAAAGAAA
AAGAATGAGAAACAAATAAAAGAAAAAGTTCTCCCTAAGTTATAATTAACTCATGCAAAATCTAACTTCTAGAAGTTTTTTTTGTTTATTTATCCAAAAGTTGATTTTTAACCTTTAACA
TAAGCTAAAAAAAAAATTATCTCAAATTTTGTATTTTCTTTTTCTATAGGTGTTTCGTGAAAAGTTTACTCTAGTATGCCTCCTAGTTTTAGTGTTCAGATTGGTTTGTGGTGAATTTTG
ATTAGCATAATCCAATTACATACTAATATTATCCTCATGTTGCATGTCATGCATAAACTTGAGTCAAAATTATTTCAATGTCATTTTCTAAACAATTTTGGTACAAATGTTACATATAGG
GGGGCCCATACTCTAGGAGTCGCCAGGTGCACCAACTTCAGGCAAAGACTCTACAACCAAAGTGGAAATGGCCAGCCAGATCCCACTCTTGACCAAAACTATGCTGCTTTTTTGCGTGTT
ACGTGTCCAAGGACGACTTTGGGTGACCAGAATCCGTTCTTCCTAGACTACGCCACACCACTTAAATTTGACAACAGCTACTTCAAGAACCTGATGGAAAACAAGGGTCTCTTAAATTCT
GATCAAATTCTCTTCACAATGAACCAAGAATCAGCTGAGTTAGTGAGGTTGTATGCTGAAAGAAACGACCTTTTCTTTGAACAATTCTCCAAGTCCATGATCAAGATGGGAAACATTTCT
CCTTTGACGAATTCAAGTGGAGAGATCAGACAGAACTGCCGGAGGGTTAACGCTTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTCAATTCCATGAGCTTTCTCCTGCTTCTTTCTTTACTAGCCTTTGCTCCCTTGTGCCTCTGTAACCTCAACCCTCAGTTTTATGACAATTCATGCCCTCAAGCTCAGCAAATTGCC
AAGTCCATTCTTACCTCGTATTTTGTAATTCAACCCGGATATGCGGCTCAAATTCTCAGGCTTCATTTCCATGATTGTTTTGTCATGGGATGTGATGGTTCATTGTTGTTAGATAGCAGT
GAAAGCATCGTCAGTGAGAAGGAATCAGATCCCAACCGTGATTCAGCTAGAGGATTTATAGTCATTGATGCAATTAAACTGGCGATAGAGAGAGCATGCCCTTCTACAGTGTCTTGTGCT
GACATCTTGACTATAGCTGCAAGAGATTCAGTTGTTCTTACTGGTGGACCAAGCTGGGAAGTACCCTTAGGCAGAAGGGACTCTCGAGATGCAAGCATAAGTGGCTCCAACAACAACATT
CCAGCCCCAAATAGCATATTTCCGACCCTCCAAACAAAATTCGAGCAACAGGGGCTTAACCTTACTGATCTAGTTACTCTATCGGGGGCCCATACTCTAGGAGTCGCCAGGTGCACCAAC
TTCAGGCAAAGACTCTACAACCAAAGTGGAAATGGCCAGCCAGATCCCACTCTTGACCAAAACTATGCTGCTTTTTTGCGTGTTACGTGTCCAAGGACGACTTTGGGTGACCAGAATCCG
TTCTTCCTAGACTACGCCACACCACTTAAATTTGACAACAGCTACTTCAAGAACCTGATGGAAAACAAGGGTCTCTTAAATTCTGATCAAATTCTCTTCACAATGAACCAAGAATCAGCT
GAGTTAGTGAGGTTGTATGCTGAAAGAAACGACCTTTTCTTTGAACAATTCTCCAAGTCCATGATCAAGATGGGAAACATTTCTCCTTTGACGAATTCAAGTGGAGAGATCAGACAGAAC
TGCCGGAGGGTTAACGCTTGA

Retrieve as FASTA