Entry information : GmPrx[P]303 ( Glyma18g17410.1)
Entry ID 9021
Creation 2011-07-04 (Qiang Li)
Last sequence changes 2015-12-09 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Achraf Jemmat
Last annotation changes 2016-01-14 (Achraf Jemmat)
Peroxidase information: GmPrx[P]303 ( Glyma18g17410.1)
Name (synonym) GmPrx[P]303 ( Glyma18g17410.1)
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx[P]303
start..stop
S start..stop
GmPrx173 591 0 1..322 1..322
MtPrx91 471 4e-169 5..322 10..327
EcamPrx61 422 2e-149 17..322 23..328
EgrPrx61 421 4e-149 17..322 23..328
Literature and cross-references GmPrx[P]303 ( Glyma18g17410.1)
DNA ref. Phytozome 12:   Gm18 (18665120..18664204)
Protein sequence: GmPrx[P]303 ( Glyma18g17410.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322 (306)
PWM (Da):   %s   35775.95 (33751.8)  
PI (pH):   %s   8.05 (8.05) Peptide Signal:   %s   cut: 17 range:17-322
Sequence
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Send to Peroxiscan
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MFLLFLSLSF FPLIQIQLTT NYYQKTCPKF FDIVRKAVTH KQLSTPTTAG AMLRLFFHNC MVGGCDTSIL VTSNTFNKAE RDAAVNLPLS GDGFDTVARA KGAL*LECPG VASCADILAV  AAHDLIVAVG GPTFDLRLGR KDSLESKATD PENQFPLPTM SLSEVIKIFT SKGFSIQEMV ALVGAHTIGL SHFNQFSHRL FNFNKNSEID PAYNPDYAAG LKKLCQNYTK DPSMSAFNDA 
ITPTKFDNMY YKNLRKGMGL LVTDSAMFDD SRSRPFVDRY ADDEKKFFQD FARAMEKLSV LQVKTEGKGE VRSRCDSFNT LNN* 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic (frame shift and stop in frame). Incorrect prediction from phytozome (5' end is missing ). No EST.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTTCCTCC TTTTCCTCTC CCTATCCTTC TTTCCCTTGA TCCAAATCCA GCTCACCACC AACTACTACC AAAAAACnTG TCCCAAATTC TTCGACATCG TCCGAAAAGC CGTCACCCAC  AAGCAACTGT CGACGCCAAC CACTGCTGGC GCCATGCTCC GCCTCTTCTT CCACAACTGT ATGGTTGGCG GCTGCGACAC TTCCATCCTC GTCACCTCCA ACACCTTCAA CAAGGCGGAG  CGTGACGCAG CCGTCAACCT CCCCCTCTCG GGGGACGGGT TTGACACAGT GGCGCGCGCC AAnGGCGCCC TCTAGCTTGA GTGCCCTGGC GTCGCCTCCT GTGCCGACAT CCTGGCCGTG  GCCGCACACG ATCTCATTGT TGCAGTCGGT GGCCCCACCT TTGATCTCCG CCTCGGTCGG AAAGACTCCC TCGAATCAAA AGCCACTGAC CCTGAAAACC AATTCCCCTT ACCAACCATG  TCTTTGTCAG AAGTAATAAA AATCTTCACA TCCAAAGGCT TCTCTATTCA AGAAATGGTG GCTCTCGTTG GTGCACACAC CATAGGGTTA TCCCACTTTA ACCAATTTTC CCACAGGCTT  TTCAACTTTA ACAAGAATTC CGAAATTGAC CCTGCGTATA ACCCTGATTA CGCTGCGGGG TTGAAGAAAC TGTGTCAAAA TTACACCAAA GACCCTTCCA TGTCAGCGTT TAACGACGCG  ATAACTCCCA CGAAGTTTGA TAACATGTAT TACAAGAACT TGCGGAAAGG AATGGGATTG TTGGTCACTG ATAGTGCCAT GTTTGATGAT TCCAGATCGA GGCCCTTCGT TGACAGGTAC  GCGGATGATG AAAAGAAGTT CTTTCAGGAT TTCGCACGTG CCATGGAAAA ACTTAGTGTG TTGCAGGTTA AGACCGAAGG AAAAGGAGAG GTGCGGTCGA GGTGTGACTC ATTCAACACG 
CTTAATAATT GA 

Retrieve as FASTA