Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
187 |
PWM (Da): |
20406.44 |
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PI (pH):
| 7.92 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGCPDYAVLL GRRDGLSFST *GTRDLPKPF NTTGVFTAKN FDVTDVVALS GTHTCGTFFN RLSPLDPNID KTLAKQLQST CPDANSGNTA NLDIRTPTLF DNKYYLDLMN RQGVFTSDQD
LLSDKRTKAL VNAFALN*TL FFDKFVDATI RLSQLDVLTG NQGEIRAKCN VVNARKSLLT SVVQLVDQF
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Retrieve as FASTA
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Remarks |
Pesudogene from genomic. Incorrect annotation from Phytozome (Both 5'and 3' ends are missing, Gaps in frame and Stops in frame). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ACAGGATGCC CCGATTATGC AGTGCTACTA GGAAGACGAG ATGGCCTGAG CTTCAGCACA TGAGGAACAC GTGATCTCCC CAAACCCTTC AACACCACCG GCGTTTTCAC CGCCAAAAAC
TTTGATGTCA CCGACGTTGT CGCCTTATCC GGCACACACA CCTGCGGCAC ATTCTTCAAC AGGCTCTCCC CTCTCGACCC CAACATAGAC AAAACCCTAG CGAAGCAACT CCAGTCCACG
TGCCCCGACG CAAACTCCGG CAACACCGCT AACTTGGACA TCAGAACCCC GACACTGTTC GACAACAAGT ACTACCTCGA CCTAATGAAC CGCCAGGGCG TGTTCACCTC GGATCAGGAC
TTGCTCAGTG ATAAGCGGAC TAAAGCGTTG GTGAATGCAT TTGCATTGAA TTAGACGTTG TTCTTTGACA AGTTTGTGGA TGCTACTATA AGGTTGAGTC AATTGGATGT GCTCACTGGG
AATCAAGGTG AAATTAGGGC TAAGTGCAAT GTCGTGAATG CTAGGAAATC TTTGTTGACG TCTGTGGTGC AATTGGTTGA TCAGTTT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ACAGGATGCC CCGATTATGC AGTGCTACTA GGAAGACGAG ATGGCCTGAG CTTCAGCACA TGAGGAACAC GTGATCTCCC CAAACCCTTC AACACCACCG GCGTTTTCAC CGCCAAAAAC
TTTGATGTCA CCGACGTTGT CGCCTTATCC GGCACACACA CCTGCGGCAC ATTCTTCAAC AGGCTCTCCC CTCTCGACCC CAACATAGAC AAAACCCTAG CGAAGCAACT CCAGTCCACG
TGCCCCGACG CAAACTCCGG CAACACCGCT AACTTGGACA TCAGAACCCC GACACTGTTC GACAACAAGT ACTACCTCGA CCTAATGAAC CGCCAGGGCG TGTTCACCTC GGATCAGGAC
TTGCTCAGTG ATAAGCGGAC TAAAGCGTTG GTGAATGCAT TTGCATTGAA TTAGACGTTG TTCTTTGACA AGTTTGTGGA TGCTACTATA AGGTTGAGTC AATTGGATGT GCTCACTGGG
AATCAAGGTG AAATTAGGGC TAAGTGCAAT GTCGTGAATG CTAGGAAATC TTTGTTGACG TCTGTGGTGC AATTGGTTGA TCAGTTT
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Retrieve as FASTA
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