Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
82 |
PWM (Da): |
9038.77 |
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PI (pH):
| 9.29 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
FCISNLVIYF SSIAYPCITL GKK*AFLNVS SLAPPPIVDG LSWDFYRTSC PMLEGIVSKH LQKVLKKDNG PTPALLRIFF HDC
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic. Incorrect prediction from Phytozome (Just exon 1, 5' end is missing. Stop in frame). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TTTTGCATTA GTAATCTTGT TATTTATTTT TCAAGCATTG CTTATCCTTG CATTACTCTG GGTAAAAAGT AAGCTTTCTT GAATGTTTCC TCCTTGGCAC CTCCTCCAAT TGTGGATGGA
CTTTCATGGG ATTTCTATAG GACAAGTTGT CCCATGCTTG AAGGGATAGT GAGCAAGCAT CTCCAGAAGG TGTTAAAGAA GGACAATGGT CCAACTCCTG CCTTACTCAG GATCTTCTTC
CATGACTGT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TTTTGCATTA GTAATCTTGT TATTTATTTT TCAAGCATTG CTTATCCTTG CATTACTCTG GGTAAAAAGT AAGCTTTCTT GAATGTTTCC TCCTTGGCAC CTCCTCCAAT TGTGGATGGA
CTTTCATGGG ATTTCTATAG GACAAGTTGT CCCATGCTTG AAGGGATAGT GAGCAAGCAT CTCCAGAAGG TGTTAAAGAA GGACAATGGT CCAACTCCTG CCTTACTCAG GATCTTCTTC
CATGACTGT
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Retrieve as FASTA
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