Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
244 |
PWM (Da): |
25821.88 |
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PI (pH):
| 8.79 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GCDASVLLDD TSTFT*EKSA CANVNSLRGF EVIDDIKTKV EAACPGVVSF ADILAIVARN SVLGGPSWNV GLGRRDSxQA SKNSATTDIP SPLKDLSVHI SSFSNKGFNT KEMVALSGKY
QRGQARCQLF RGRVYNESSI ESNFATSLKS NCPSxYGDIN LSPLGVTTSV LFDTAYFKNL INKKGLLHSD QQLFSGGSTD SRVTAYSNDP SAFYADFASA MVKMGNLSSL TRKSGQIRSN
CHKVN
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic. Incorrect prediction from Phytozome. (Stops in frame, 5' end is missing). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGATGTGATG CATCTGTTCT GTTAGATGAC ACTTCGACCT TTACTTGAGA GAAGTCAGCT TGTGCAAATG TGAATTCTCT GAGAGGTTTT GAAGTAATTG ATGACATCAA AACTAAAGTG
GAGGCTGCTT GTCCCGGAGT TGTTTCTTTT GCAGATATTC TAGCTATTGT TGCCCGTAAT TCCGTTGTTG CAGTAAGCTT AATAAATATG AACAAATAAA ATCCAAAATG ATAAACATAT
TGATATATAG ATATACTTGT TAGCTTGTTA CACTATTATT ATAGAACATG TCTCGTTATA AAATTTGATG AAGTTTCACT GACTCATATT ATAAACCAAA TGAACAATTA TAAATTTTTT
ACAACACTTT TTTTTATCTC TTCATCTCAT TATCGATACA TCTTATCTCA CTTTTCTCTC TTCTCTTGCT ATTTAGAAAG TGTGATGTGA GAATTTTGGT AAGTAAAAAT AGTATTACAT
ACATGATTTT TCTATTTAAC ACTTTCATTT AAACAAGACA TATTTGAGCT TGAAGAATAA ATGATTCTAA CAATCATTTC AGCTATTATT TAGAAAGATG AGGATAACAA GGACAGAACT
TTAGACCACA AGGCCGTTAT AGTAGTTTAA AAATACTACT ATCATAAACT AATTACTCCA AGAGCTTAAA ATAGTAGGTA AAATTACATA AAACAGTGTT ATATCTAACA ATTCACTTTT
AGCAATTGAT TTGTATTTTG GCTTATGTAT CTCAGTTGGG AGGTCCATCC TGGAATGTTG GGTTAGGCAG AAGAGATTCA ACnCAGGCAA GTAAAAATTC TGCCACTACG GATATCCCAT
CCCCACTAAA GGATCTTAGT GTCCATATAT CTTCTTTTTC AAATAAGGGG TTTAACACCA AGGAAATGGT AGCCCTCTCA GGTAAATATT AGAGGATCTC TCACTTTAAC TAATTAATTA
ATGACATTAA TATAAGTAAA ATTATATATT ATGTCAACAA TATATATTAT CACATATATG AATATTGTAT CATCTAATAA TTTTTCATGC ATAAATAGGA GCTCATACAA CGGGGGCAAG
CCAGGTGTCA GCTATTCAGA GGCAGGGTTT ACAACGAAAG CAGCATTGAG TCAAACTTTG CAACATCACT CAAGTCAAAC TGTCCAAGCA CnTATGGAGA CATCAACCTT TCCCCACTTG
GTGTCACCAC AAGTGTTCTA TTTGACACTG CTTATTTCAA GAACCTTATC AACAAAAAGG GACTTCTACA TTCTGATCAG CAGTTATTTA GTGGTGGTTC TACAGATTCT CGGGTCACTG
CCTATAGCAA CGACCCTTCA GCTTTCTATG CAGACTTTGC TAGTGCCATG GTCAAAATGG GAAACCTTAG CTCCTTAACA AGGAAAAGTG GCCAAATTCG TTCTAATTGC CACAAGGTCA
AT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGATGTGATG CATCTGTTCT GTTAGATGAC ACTTCGACCT TTACTTGAGA GAAGTCAGCT TGTGCAAATG TGAATTCTCT GAGAGGTTTT GAAGTAATTG ATGACATCAA AACTAAAGTG
GAGGCTGCTT GTCCCGGAGT TGTTTCTTTT GCAGATATTC TAGCTATTGT TGCCCGTAAT TCCGTTTTGG GAGGTCCATC CTGGAATGTT GGGTTAGGCA GAAGAGATTC AACnCAGGCA
AGTAAAAATT CTGCCACTAC GGATATCCCA TCCCCACTAA AGGATCTTAG TGTCCATATA TCTTCTTTTT CAAATAAGGG GTTTAACACC AAGGAAATGG TAGCCCTCTC AGGTAAATAT
CAACGGGGGC AAGCCAGGTG TCAGCTATTC AGAGGCAGGG TTTACAACGA AAGCAGCATT GAGTCAAACT TTGCAACATC ACTCAAGTCA AACTGTCCAA GCACnTATGG AGACATCAAC
CTTTCCCCAC TTGGTGTCAC CACAAGTGTT CTATTTGACA CTGCTTATTT CAAGAACCTT ATCAACAAAA AGGGACTTCT ACATTCTGAT CAGCAGTTAT TTAGTGGTGG TTCTACAGAT
TCTCGGGTCA CTGCCTATAG CAACGACCCT TCAGCTTTCT ATGCAGACTT TGCTAGTGCC ATGGTCAAAA TGGGAAACCT TAGCTCCTTA ACAAGGAAAA GTGGCCAAAT TCGTTCTAAT
TGCCACAAGG TCAAT
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Retrieve as FASTA
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