Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
225 |
PWM (Da): |
25119.78 |
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PI (pH):
| 6.87 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
LILDNVEGIT SEKLAGPNLN SLRGFEVKHK IKYLLEEECH ITVSCADILA MSTHDAVELR GGPRWEVLLG RMDALELSFS GANILIPAPS HTIGRARCVS FKQSIYDAKD EYHYGYDNYK
*YISFRKILR SICPVEGRDN KFAPLDFQTP KKxFDNHYFI NILEGKGLLG SDNVLSSHDL DGKITEQVWA YASNEKLLFA SFAKSMIKMG NMNVLTGNEG EIRRNC
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic. Incorrect prediction from Phytozome (Stops in frame, 5' end is missing). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CTGATTTTGG ACAATGTGGA GGGCATCACA AGTGAAAAGC TGGCTGGACC AAATCTAAAC TCTTTACGTG GATTTGAGGT CAAACACAAG ATAAAGTATT TGCTTGAAGA AGAATGTCAT
ATTACTGTTT CATGTGCTGA CATCCTTGCC ATGTCGACAC ATGATGCTGT TGAATTGGTA AACACTGCTT TGTCACAGGG GTCAAATGAA TGTAGTTATA TTTTTATTTT TATTTTTCTT
TACAACAATT TCTATCATTT GTTTTTGAAG AGAGGAGGAC CAAGATGGGA AGTCTTGCTT GGAAGGATGG ATGCTCTCGA GTTAAGTTTC AGTGGAGCTA ACATATTAAT TCCTGCTCCA
AATTCATCTT TGGGGGTTCT CATAGATAAT TTTAAGCATC AAGGCCTCGA CATAGAAGAA TTGGTAACTC TATCTGGTAT ATTTATTATT TTGACAACAT ATATATACAA CTTTCTAAAT
TGTTGTTAGC ACAATTTTCT AATCAAAATT AGTGTCCCAC ATCTTCATAA AAAAAATAGT GACCCACCTT AATGAATTAT TGAAATGAAA CTAATTTTTA ATTGAAAAAT AGCACAAACA
AAACCCCAAT TGTAATTGAT GAATAACACA AACAATACCT ATAAATACTC TAATTTTGTC CTTATAATTT GTTCAAATTA GTTTAATCAA ATGTTAATAT TTTGGGGCTC TGACAAAGGA
AGAAGAGATT AAGCACGTAG AGTTCTTGCT TGACAAAATA CATGTAGCCA TACTATAGGA AGAGCAAGAT GTGTAAGCTT CAAGCAGAGC ATATATGATG CAAAAGACGA ATATCACTAT
GGCTATGATA ACTACAAATG ATACATAAGT TTCAGGAAAA TCCTGCGGTC CATATGCCCT GTTGAGGGAA GGGACAATAA ATTTGCACCC TTGGATTTTC AAACCCCAAA AAAGAnnTTT
GACAATCACT ACTTCATAAA CATTCTGGAA GGGAAAGGCT TGTTAGGTTC TGACAATGTT CTTAGCAGCC ATGACTTAGA TGGAAAGATT ACAGAGCAGG TGTGGGCTTA CGCCTCTAAT
GAAAAACTTT TGTTTGCTTC TTTTGCTAAA TCTATGATTA AAATGGGAAA CATGAATGTT CTTACAGGAA ATGAGGGGGA AATTAGGAGG AATTGT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CTGATTTTGG ACAATGTGGA GGGCATCACA AGTGAAAAGC TGGCTGGACC AAATCTAAAC TCTTTACGTG GATTTGAGGT CAAACACAAG ATAAAGTATT TGCTTGAAGA AGAATGTCAT
ATTACTGTTT CATGTGCTGA CATCCTTGCC ATGTCGACAC ATGATGCTGT TGAATTGAGA GGAGGACCAA GATGGGAAGT CTTGCTTGGA AGGATGGATG CTCTCGAGTT AAGTTTCAGT
GGAGCTAACA TATTAATTCC TGCTCCAAGC CATACTATAG GAAGAGCAAG ATGTGTAAGC TTCAAGCAGA GCATATATGA TGCAAAAGAC GAATATCACT ATGGCTATGA TAACTACAAA
TGATACATAA GTTTCAGGAA AATCCTGCGG TCCATATGCC CTGTTGAGGG AAGGGACAAT AAATTTGCAC CCTTGGATTT TCAAACCCCA AAAAAGAnnT TTGACAATCA CTACTTCATA
AACATTCTGG AAGGGAAAGG CTTGTTAGGT TCTGACAATG TTCTTAGCAG CCATGACTTA GATGGAAAGA TTACAGAGCA GGTGTGGGCT TACGCCTCTA ATGAAAAACT TTTGTTTGCT
TCTTTTGCTA AATCTATGAT TAAAATGGGA AACATGAATG TTCTTACAGG AAATGAGGGG GAAATTAGGA GGAATTGT
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Retrieve as FASTA
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