Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
251 |
PWM (Da): |
27417.64 |
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PI (pH):
| 6.33 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
YNDTCPQFSQ IIRDIVTRKQ IMSPTTVIAT LRLFLHDCLL PNDCDASILL SSIAFSKVER NANINHSLPS DTFDLIIRAK AALELSCPNT ISCSNILFDA TCDLLTMLGG PFFLVFLGRC
NGQTSLAFAV SSHLSTPSMP ISQITQLFAK CGFTVEEFVA LSGAHTIEFS HCFEFVTNLS NNTSSSYNPR YAQGLQKACA DYKTNPTLSV FNDIMTSNKF YNAYL*NLPK GLGVLKSDLG
LYGDPS**TF SSRF
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Retrieve as FASTA
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Remarks |
Pseudogen from genomic. Incorrect prediction from Phytozome (Stops in frame. Both 5' end and 3' end are missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TATAATGACA CGTGTCCACA GTTCAGCCAG ATCATTAGGG ACATAGTAAC CCGCAAGCAG ATCATGAGCC CCACCACAGT CATTGCCACC CTCCGCCTCT TCCTCCACGA CTGCCTTCTC
CCCAATGACT GCGATGCCTC CATCCTTCTC TCCTCCATCG CCTTCTCCAA GGTTGAGCGC AACGCCAACA TCAACCATTC CCTCCCAAGC GACACCTTTG ACCTCATCAT CCGTGCCAAG
GCCGCCCTCG AGCTCTCCTG CCCCAACACC ATCTCTTGCT CTAACATCCT CTTCGACGCC ACCTGCGACC TCCTGACCAT GCTCGGCGGC CCCTTCTTCC TCGTCTTCCT CGGTCGTTGC
AACGGCCAGA CCTCCCTCGC CTTCGCCGTA TCCTCCCACC TCTCCACCCC CTCCATGCCC ATCTCCCAAA TCACCCAACT CTTCGCCAAA TGCGGCTTCA CCGTCGAAGA ATTCGTCGCC
CTCAGTGGGG CCCACACCAT CGAATTCTCT CATTGCTTCG AGTTCGTCAC CAACCTCTCC AACAACACTT CCTCCTCCTA CAACCCTCGC TACGCTCAGG GGCTTCAAAA GGCTTGTGCA
GATTACAAAA CTAACCCTAC CTTATCAGTC TTCAACGATA TCATGACGTC GAACAAGTTC TATAATGCTT ACCTCTAGAA CCTTCCCAAG GGTTTGGGTG TGTTGAAATC TGACCTTGGT
TTGTATGGTG ACCCTTCTTA ATGAACCTTC TCCTCACGTT TT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TATAATGACA CGTGTCCACA GTTCAGCCAG ATCATTAGGG ACATAGTAAC CCGCAAGCAG ATCATGAGCC CCACCACAGT CATTGCCACC CTCCGCCTCT TCCTCCACGA CTGCCTTCTC
CCCAATGACT GCGATGCCTC CATCCTTCTC TCCTCCATCG CCTTCTCCAA GGTTGAGCGC AACGCCAACA TCAACCATTC CCTCCCAAGC GACACCTTTG ACCTCATCAT CCGTGCCAAG
GCCGCCCTCG AGCTCTCCTG CCCCAACACC ATCTCTTGCT CTAACATCCT CTTCGACGCC ACCTGCGACC TCCTGACCAT GCTCGGCGGC CCCTTCTTCC TCGTCTTCCT CGGTCGTTGC
AACGGCCAGA CCTCCCTCGC CTTCGCCGTA TCCTCCCACC TCTCCACCCC CTCCATGCCC ATCTCCCAAA TCACCCAACT CTTCGCCAAA TGCGGCTTCA CCGTCGAAGA ATTCGTCGCC
CTCAGTGGGG CCCACACCAT CGAATTCTCT CATTGCTTCG AGTTCGTCAC CAACCTCTCC AACAACACTT CCTCCTCCTA CAACCCTCGC TACGCTCAGG GGCTTCAAAA GGCTTGTGCA
GATTACAAAA CTAACCCTAC CTTATCAGTC TTCAACGATA TCATGACGTC GAACAAGTTC TATAATGCTT ACCTCTAGAA CCTTCCCAAG GGTTTGGGTG TGTTGAAATC TGACCTTGGT
TTGTATGGTG ACCCTTCTTA ATGAACCTTC TCCTCACGTT TT
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Retrieve as FASTA
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