Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
240 |
PWM (Da): |
27099.89 |
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PI (pH):
| 7.46 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MTSEKLAGPNLNSLCGFEVIDKIKYLVKEECPITVSCVDILAMAARDVVELRGGPRWDALLGRKDALESSFSGANILIPAPNSSLEVLIDNFKQQGLDIEDLVTLSGSHTIGRARCLSFRQRIYNAKEEYHYGYDHYKRYTSFRRILRSICPVEGRDTKFAPLDFQTPKRFHNHYFINILEGKGLLGSDNVLISHDLDGKTTEQVWAYASNEKLLIKMGNINVLTGNEGEIRRNCRFVDA* |
Retrieve as FASTA
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Remarks |
Pseudogene from genomic. Incorrect prediction from phytozome (first exon is missing and not found). No EST. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGACAAGTGAAAAGCTGGCTGGACCAAATCTGAACTCTTTATGTGGATTTGAGGTCATAGATAAGATAAAGTATTTGGTTAAAGAAGAATGTCCTATTACTGTTTCATGTGTTGACATC CTTGCCATGGCTGCACGTGATGTTGTTGAATTGGTAAACACTAGGGGTCAAATGAATNNNNNNNNNNNNNNNNNNNNNNNNNNTTTACAAAAATTTTTATCATTCGTTTTTGAAGAGAGG AGGACCAAGATGGGATGCCTTGCTTGGAAGGAAGGATGCTCTCGAGTCAAGTTTTAGTGGAGCTAACATATTAATTCCTGCTCCAAATTCATCTTTGGAGGTTCTCATAGATAATTTTAA GCAACAAGGCCTCGACATAGAAGACTTGGTAACTCTATCTGGTATATTTATTATTTTGACAAGATATATATACAACTTTCTAAATTGCTGTTAGTACAATTTTCTAATCAAAATTAGTGT TCCACATCTTTATAAAAAAAATTAGTGGCCCGCCTTAATGAATTATTGAAATAAAACTAATTTTTAATTGAAAAATAACACAAACAAAACCCCAATTCTAATTGATGAATAACACAAACA ATACCTATAAAAACTCTAATTTTGTCCTTATAATTTGTTCAAAGTTCAATCAAATGTTAATATTTTGGGACTCTGACAAAGGAAGAAGAGATTAAGCATGTAGAGTTCCTGCTTGACAAA ATACAGGTAGCCATACTATAGGAAGAGCAAGATGTCTAAGCTTCAGGCAGAGGATATATAATGCAAAAGAGGAATATCATTATGGCTATGATCACTACAAACGATACACAAGTTTCAGGA GAATCCTGCGGTCCATATGCCCTGTTGAGGGAAGGGACACTAAATTTGCACCCTTGGATTTTCAAACCCCAAAAAGATTTCACAATCACTACTTCATAAACATTCTTGAAGGGAAAGGCT TGTTAGGTTCTGACAATGTTCTTATCAGCCATGACTTAGATGGAAAGACTACAGAGCAGGTGTGGGCTTATGCCTCTAATGAAAAACTTTTGATTAAGATGGGAAACATCAATGTTCTTA CAGGAAATGAGGGGGAAATTAGGAGGAATTGTAGGTTTGTTGATGCTTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGACAAGTGAAAAGCTGGCTGGACCAAATCTGAACTCTTTATGTGGATTTGAGGTCATAGATAAGATAAAGTATTTGGTTAAAGAAGAATGTCCTATTACTGTTTCATGTGTTGACATC CTTGCCATGGCTGCACGTGATGTTGTTGAATTGAGAGGAGGACCAAGATGGGATGCCTTGCTTGGAAGGAAGGATGCTCTCGAGTCAAGTTTTAGTGGAGCTAACATATTAATTCCTGCT CCAAATTCATCTTTGGAGGTTCTCATAGATAATTTTAAGCAACAAGGCCTCGACATAGAAGACTTGGTAACTCTATCTGGTAGCCATACTATAGGAAGAGCAAGATGTCTAAGCTTCAGG CAGAGGATATATAATGCAAAAGAGGAATATCATTATGGCTATGATCACTACAAACGATACACAAGTTTCAGGAGAATCCTGCGGTCCATATGCCCTGTTGAGGGAAGGGACACTAAATTT GCACCCTTGGATTTTCAAACCCCAAAAAGATTTCACAATCACTACTTCATAAACATTCTTGAAGGGAAAGGCTTGTTAGGTTCTGACAATGTTCTTATCAGCCATGACTTAGATGGAAAG ACTACAGAGCAGGTGTGGGCTTATGCCTCTAATGAAAAACTTTTGATTAAGATGGGAAACATCAATGTTCTTACAGGAAATGAGGGGGAAATTAGGAGGAATTGTAGGTTTGTTGATGCT TAG |
Retrieve as FASTA
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