1. Browse the Database
  2. View Redoxidase
Entry information : MeAPx02 (cassava4.1_027646m)
Entry ID 9051
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2016-01-06 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-01-06 (Achraf Jemmat)
Peroxidase information: MeAPx02 (cassava4.1_027646m)
Name (synonym) MeAPx02 (cassava4.1_027646m)
Class Ascorbate peroxidase    [Orthogroup: APx2004]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot
Organism Manihot esculenta (cassava)    [TaxId: 3983 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MeAPx02
start..stop		 S start..stop
PtAPx10 586 0 1..350 1..348
VvAPx07 577 0 1..349 1..344
CpapAPx06 568 0 1..350 4..348
CclAPx01 560 0 1..349 1..349
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9051' 'join(5558116..5558214,5558328..5558429,5558576..5558660,5558748..5558782,5558879..5558944,5559049..5559089,5559433..5559563,5559708..5559814,5560157..5560294,5560423..5560557,5560649..5560759)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 5558116..5558214 97 N° 2 5558328..5558429 100 N° 3 5558576..5558660 83 N° 4 5558748..5558782 33
N° 5 5558879..5558944 64 N° 6 5559049..5559089 39 N° 7 5559433..5559563 129 N° 8 5559708..5559814 105
N° 9 5560157..5560294 136 N° 10 5560423..5560557 133 N° 11 5560649..5560759 109  
join(5558116..5558214,5558328..5558429,5558576..5558660,5558748..5558782,5558879 ..5558944,5559049..5559089,5559433..5559563,5559708..5559814,5560157..5560294,55 60423..5560557,5560649..5560759)


exon

Literature and cross-references MeAPx02 (cassava4.1_027646m)
DNA ref. Phytozome 12:   scaffold08574 (4274..2952)
Protein sequence: MeAPx02 (cassava4.1_027646m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   349
PWM (Da):   %s   38227.55  
PI (pH):   %s   7.91
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGVSFLSTFPSLLHLSSLSNPNAGTHRYPSSRAGPIRCNKIETDVTGGENVFRRRDVLKCFGAAISLELITSSGSFTEMANAADLIQRRQRSEFQSSVKQTIFTAIKGKPEVIPSILTLA
LNDAMTFDKATKSGGPNGSVRFSSEISRPENKGLSAALDLLEEAKKEIDSYSKGGPISYADLIQFAAQSALKSTFLASAIRKCGGNEEKGTLLYTAYGSNGQWGLFDKQFGRTDTQEPDP
EGRIPQWEKATVQEMKDKFKAVGFGPRQLAVMSAFLGPDQAATEALLATDPEVLPWVQKYQRSRETVSETDYEVDLITTLTKLSCLGQQINYEAYTYPVQKIDVTKLKL*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGGGTCTCTTTCCTCTCAACTTTCCCTTCTCTGCTTCATCTCTCTTCTCTGAGCAATCCCAATGCTGGCACTCACAGATACCCTTCCTCTCGTGCTCTGTAGGTTCACTTCACTCAC
CTCTTCGTTTTCCTTTATATAGACAATTGTAGTTTGTGTATAGCATTGTAAGCAAAAACCACCCTTTGTTTTTGTTTCTGCACTTAACAAATAGGGTCCCATCCGTTGCAACAAAATTGA
GACCGATGTTACTGGTGGCGAGAATGTTTTCCGGCGAAGAGACGTTTTGAAATGCTTTGGAGCTGCGATTAGCTTGTGGTAAGAGAAAATCTGAAGAGGTCATTGAATGCATACTTTTCA
TTGCCCATGTGAGGGAACATTTGAATTAGGCATTTCGAGATTTGATAGTCTGTGATTTAGAATGATGTGATGATGAGTTTCTACCAGTTTTGATGTCATCTTAGGAATTAATAACGAGCT
CAGGATCATTCACTGAAATGGCTAATGCTGCTGATTTGATCCAACGCAGACAGCGCTCTGAGTTTCAGTGTGTAAGTCTTCTTAAACTCTGTAGAACAAATTTTCCTTATCTAGAACCAG
CTACAGTCTGCTGAATTAGAGCTGCTTTTTTCTCACAGCAAGTGTTAAGCAGACTATTTTTACAGCTATAAAGAGGTAAGTTCTGATGCATTAAGCTTTAAAATTCTGATATATACTATC
CTGCAATGATTTCTTCTGTTGTGATCATTCCTAAATCTATATTCATTGCAGGGAAAGCCTGAAGTTATTCCATCAATTCTCACCCTGGCACTGAATGATGCCATGACTTTTGATAAGAGG
TCAGACCACAAACCTTACCTGTGAACAATTTCTTTCTGGATGTTACGGAACTCCTTTGAAAAGGGAAACAAATAAACTGATCTCTTTCTGATTAAGTTTGTAGGCTACAAAATCTGGAGG
CCCAAATGGATCTGTACGGTTCAGAGGTATCCACTATATGCAATATGCATGAATCTCATATCCAAGTAACATCTGGTCCATGCTAACTTGCTGTCAATATATCCTCAAGTATAACATCTA
TGAACATTAACTTATAAAATGCTTCAGAAAGAAGTCTGTTGGGTAAATGGCGATATGGGACGTTAAGTCTTGCTGGTTTTATAGCTTTTTGAAACTCATTAGCAACAAGCTTATATTGTT
TTAGTTATCAGCTATAAAGAACTAATAATTTTTTCTTGGTTTTTCGATTGTATTTGCAATTTGAAGAACTATTTTTCCCCTTGCTGAACTGCTATCTTAACATATTTTCCCCATTTTTGC
TGCCTGAAGCTCAGAGATAAGCAGACCTGAAAACAAGGGACTCTCCGCTGCTCTTGATTTATTAGAAGAAGCAAAGAAAGAGATAGATTCATATTCCAAGGGCGGACCAATCTCCTATGC
AGATCTTATACAATTCGCAGAGGTTATGCATATTTAAAACCTAGTTTGAACCATACTGCATATAATGGCTATATCTTGAATGAGCTAAAATATGCAGACAAATAGAATATGATTCATCAA
CAGGAAAGTGCATTGCCGCTGACTCAGTGTTCTTCGTTCTGTGTAGCACAAAGTGCACTTAAGTCCACATTTCTAGCTTCTGCCATTAGAAAGTGTGGTGGTAATGAAGAGAAAGGGACC
TTATTATACACTGCTTATGGTTCTAATGGGCAGAGGTTAGTCTTTCTAGTTTGGTTGCCTTGAAATGCATTTAACTGATAGGCACCTAGATATATGACAGATTTGAGCAATTATCCCATT
CATTATAGCTGCTTATTGAAGTCGTAACCTGAAACAATACACGTTTTTTTAAAAGAAATGTTGAATTATGTCTCGTATTTGTTGTTGGAAAAGAATTTCTGGACTAGACAGAGCTTTGAT
TCCTTTTCAATTGTGAAAAGGCATTCGACTACTTCCGTGCGTGTGTTCATTGTGTAATTAATATGATAACAGAGAATTTCTAAAAATGTAAATGATATAGCGAAACGATGTAATGCATGT
AAATATTGTTGAAACAGTGGGGCTTGTTTGATAAACAATTTGGACGGACGGATACACAAGAGCCAGATCCAGAAGGACGGATTCCGCAGTGGGAGAAAGCAACTGTCCAGGAAATGAAAG
ACAAGTTCAAAGCTGTTGGCTTCGGTCCTCGCCAGAGGTATCTAACTTCTTTTCTTCTTCACCTGCCACTTGCTTATACAGGTTTTTGTGCGTTGATAAAATTCTAAGTAGAATTTAGCA
TATTATAGTTTACTAATCTGTTTCTATCCTTTTCTGGTTGGCCAGCTAGCAGTTATGTCTGCATTCTTAGGTCCTGATCAAGCAGCTACTGAGGCCTTACTTGCTACTGATCCAGAAGTT
TTACCATGGGTTCAGAAGTACCAACGCAGCCGAGAAACAGTGTCCGAAACAGATTATGAGAGGTCAGTGTTTCAACTAAACTGAAACCTTTATCATATCTGTATATTGCATTTTTGTATT
CTTATTGTAGTTTGGGAATTTGTTGTTCTTCAGGTGGATCTGATAACCACTCTCACCAAATTAAGTTGCTTGGGCCAACAAATCAATTATGAAGCTTACACATACCCTGTCCAAAAAATT
GATGTGACCAAACTCAAATTATAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGGGTCTCTTTCCTCTCAACTTTCCCTTCTCTGCTTCATCTCTCTTCTCTGAGCAATCCCAATGCTGGCACTCACAGATACCCTTCCTCTCGTGCTGGTCCCATCCGTTGCAACAAA
ATTGAGACCGATGTTACTGGTGGCGAGAATGTTTTCCGGCGAAGAGACGTTTTGAAATGCTTTGGAGCTGCGATTAGCTTGGAATTAATAACGAGCTCAGGATCATTCACTGAAATGGCT
AATGCTGCTGATTTGATCCAACGCAGACAGCGCTCTGAGTTTCAGTCAAGTGTTAAGCAGACTATTTTTACAGCTATAAAGGGAAAGCCTGAAGTTATTCCATCAATTCTCACCCTGGCA
CTGAATGATGCCATGACTTTTGATAAGGCTACAAAATCTGGAGGCCCAAATGGATCTGTACGGTTCAGCTCAGAGATAAGCAGACCTGAAAACAAGGGACTCTCCGCTGCTCTTGATTTA
TTAGAAGAAGCAAAGAAAGAGATAGATTCATATTCCAAGGGCGGACCAATCTCCTATGCAGATCTTATACAATTCGCAGCACAAAGTGCACTTAAGTCCACATTTCTAGCTTCTGCCATT
AGAAAGTGTGGTGGTAATGAAGAGAAAGGGACCTTATTATACACTGCTTATGGTTCTAATGGGCAGTGGGGCTTGTTTGATAAACAATTTGGACGGACGGATACACAAGAGCCAGATCCA
GAAGGACGGATTCCGCAGTGGGAGAAAGCAACTGTCCAGGAAATGAAAGACAAGTTCAAAGCTGTTGGCTTCGGTCCTCGCCAGCTAGCAGTTATGTCTGCATTCTTAGGTCCTGATCAA
GCAGCTACTGAGGCCTTACTTGCTACTGATCCAGAAGTTTTACCATGGGTTCAGAAGTACCAACGCAGCCGAGAAACAGTGTCCGAAACAGATTATGAGGTGGATCTGATAACCACTCTC
ACCAAATTAAGTTGCTTGGGCCAACAAATCAATTATGAAGCTTACACATACCCTGTCCAAAAAATTGATGTGACCAAACTCAAATTATAG

Retrieve as FASTA