Entry information : MeAPx06 (cassava4.1_014642m)
Entry ID 9053
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2011-11-30 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-06 (Christophe Dunand)
Peroxidase information: MeAPx06 (cassava4.1_014642m)
Name (synonym) MeAPx06 (cassava4.1_014642m)
Class Ascorbate peroxidase    [Orthogroup: APx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot
Organism Manihot esculenta (cassava)    [TaxId: 3983 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MeAPx06
start..stop
S start..stop
HbAPx01 477 7.86e-174 1..250 1..250
MeAPx03 461 1.29e-167 1..250 1..250
AinAPx 458 2.31e-166 1..250 1..250
ZoAPx01 457 6.78e-166 1..250 1..250
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9053' 'join(584873..584991,585093..585267,585360..585425,585931..585979,586091..586176,586294..586373,586490..586592,586700..586758,586948..586960)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 584873..584991 117 N° 2 585093..585267 173 N° 3 585360..585425 64 N° 4 585931..585979 47
N° 5 586091..586176 84 N° 6 586294..586373 78 N° 7 586490..586592 101 N° 8 586700..586758 57
N° 9 586948..586960 11  
join(584873..584991,585093..585267,585360..585425,585931..585979,586091..586176, 586294..586373,586490..586592,586700..586758,586948..586960)


exon

Literature and cross-references MeAPx06 (cassava4.1_014642m)
DNA ref. Phytozome 12:   scaffold03750 (584873..586960)
Protein sequence: MeAPx06 (cassava4.1_014642m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   250
PWM (Da):   %s   27445.97  
PI (pH):   %s   6.52
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTKNYPKVSEEYQKAVDKAKKKLRGFIAEKGCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRHAAEQGHAANNGLDIAVRLLEPIKQQFPILAYADFYLAGVVAIEITGGPEVPFHPGRED
KPEPPPEGRLPDATK
GSDHLRDVFGKTMGLSDQDIVALSGAHTGRCHKERSGFEGPWTSNPLIFDNSYFKELLSGEKEGLLQLPSDKALVVDPVFRKYVEKYADEEAFFADYAEAHVRLS
EL
GFAE

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACGAAGAACTACCCAAAAGTTAGTGAAGAGTACCAGAAGGCCGTCGATAAGGCCAAGAAGAAGCTCAGAGGTTTCATTGCCGAGAAGGGCTGCGCTCCTCTTATGCTCCGTATCGCG
CGTATGTTGTATCTAGGTTTTTTCATCGTTTTATTGCATTATATGTTTGTGTGCTAGAGATTTGATTGTATATTTGGATTGAAATGGTATGGTGGTGTACAGATGGCACTCAGCTGGAAC
CTATGACGTTAAGACCAAGACTGGAGGCCCATTTGGAACCATGAGACACGCAGCGGAACAGGGCCATGCTGCTAACAATGGGCTTGATATTGCTGTTAGACTCCTTGAGCCCATCAAACA
GCAGTTCCCTATCCTCGCCTATGCCGACTTCTATCAG
AGGTTTGTGGTACTATAATTCTATGATTTAGGATGGGAGTTTCTTGCTGATTGGTTACTCTTTTGGTTTTCTGATTTGTTGTT
ACTATGTGTAGCTCGCTGGTGTCGTTGCCATTGAGATCACTGGTGGGCCTGAGGTCCCATTCCACCCTGGAAGAGAGAGGTAGTATTTTAATCTAATGGCTGCCTTTCAATTGTTGATAT
TTCGATTTTTGCTCCTTTGGACCTTTTCCCCATTTTTAAATTGTAATTTATGGTTGAGTGTCGATGTTGAAAATTTGTTTGAATTTAGAACAGTATTGAGGAAGATTACTGAAGTGATTG
TTTTTTTAAAAAAATTCTCATTACTATTCTAAATTCACTCCACTAATTGAAAATCACTGCAGTAATTAAACTAAATTGGGATATTCAATTTGTTGGGGAAAGAAAGGGCTTGATGCTCAG
TTTCTCCCTGAATTTATTGGCATATTCAATTTAGCACATTTTTTTTTTTTATTTTTGTCTAAATTAACTCCGAAGTTTTAATTTAAACTGAATTTAGTCCAAATAATTAAGAAATTGAGT
TTCAGCAAGTTATTTCTCTCTCACTCTTCTCTCCTTTCTGTGAGTATTGGCGACGGATTTTATTTTTCCGCCGGTACTAAACAGTTATTCTCTTATTATTCCAGGACAAGCCTGAGCCAC
CTCCAGAAGGTCGTCTGCCTGACGCTACCAAGG
GGGTTAGCTTCTTGCACAATGATTTGTCTATAATTGAAATCGATAAGCATCTCTATGGTTCATCTTTTTATGTATTTGGTGAAGTTT
CTTAAACTGAGGCGTCTTTTTGGCAGGTTCTGATCACTTGAGGGATGTGTTTGGCAAAACAATGGGTCTCAGTGACCAGGATATTGTTGCTCTCTCTGGTGCCCACACCCTGTGGTCAGA
TTTCAAATTTAAGCTTATTTGCTTGTGGTTAATTGCCAAATTTCTGAAGTGTGATTGTGAATATGCCTTTATACTGATTCCTGCTTGTCTTGTTGGGAATGATGACTGCAGGGAAGGTGC
CACAAGGAACGCTCTGGTTTCGAAGGTCCCTGGACCAGCAACCCATTAATCTTTGACAACTCCTACTTCAA
AAGTGAGTTGTCTGTCTCTTTCCAACGCAGACTTGTTCGGCCTTTAGCA
ACTGGGAAATTGTGTTGTTTATGATTATTAAGACGGTAATTGACGGTGTGCATTCTTCAAAATTGTTAGGGAGCTCTTGAGTGGAGAGAAGGAAGGCCTTCTACAATTGCCATCTGACAA
AGCTCTCGTTGTTGATCCTGTCTTCCGCAAATATGTTGAAAAATATGCTGCT
CTGTATGTGTCATTATTTTGTAAACCGAAGTTAAAAGTGCTGATGACATTAAAATAAAACGTTTGATA
ATTGCTAATTGCTGGTAGCTGATAGTATTTCCTGAATGCAGGATGAAGAAGCATTCTTTGCTGATTATGCTGAGGCCCATGTGAGGCTCTCTGAGCTGGGGGGTAAGCTTCAATTCTCAA
TAATTTGGTTTCTACCTGCTTCGATAATATTTAATTTTCAAGTGATTGTCCAACGTTTTTGACCTAGAAATTTATAATAATTAATGGCTAGTCAACGTTTTTCTTGGCATTCCTTGCCGT
TAATTTTTGGGGCTAGCTGTCATTGGATTTATCCTCCGCATTGTTTTGCAGATTTGCGGAGGCC

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACGAAGAACTACCCAAAAGTTAGTGAAGAGTACCAGAAGGCCGTCGATAAGGCCAAGAAGAAGCTCAGAGGTTTCATTGCCGAGAAGGGCTGCGCTCCTCTTATGCTCCGTATCGCA
TGGCACTCAGCTGGAACCTATGACGTTAAGACCAAGACTGGAGGCCCATTTGGAACCATGAGACACGCAGCGGAACAGGGCCATGCTGCTAACAATGGGCTTGATATTGCTGTTAGACTC
CTTGAGCCCATCAAACAGCAGTTCCCTATCCTCGCCTATGCCGACTTCTATCAG
CTCGCTGGTGTCGTTGCCATTGAGATCACTGGTGGGCCTGAGGTCCCATTCCACCCTGGAAGAGAG
GACAAGCCTGAGCCACCTCCAGAAGGTCGTCTGCCTGACGCTACCAAGGGTTCTGATCACTTGAGGGATGTGTTTGGCAAAACAATGGGTCTCAGTGACCAGGATATTGTTGCTCTCTCT
GGTGCCCACACCCTG
GGAAGGTGCCACAAGGAACGCTCTGGTTTCGAAGGTCCCTGGACCAGCAACCCATTAATCTTTGACAACTCCTACTTCAAGGAGCTCTTGAGTGGAGAGAAGGAA
GGCCTTCTACAATTGCCATCTGACAAAGCTCTCGTTGTTGATCCTGTCTTCCGCAAATATGTTGAAAAATATGCTGCT
GATGAAGAAGCATTCTTTGCTGATTATGCTGAGGCCCATGTG
AGGCTCTCTGAGCTGGG
ATTTGCGGAGGCC

Retrieve as FASTA